Ll_transcript_409101

• Id Trinity: TRINITY_DN51620_c0_g1_i5
• Name Transcript: Ll_transcript_409101
• Sequence: CAAAAATGGCATAAAACAAAAACATGAATAACACCAACAACTCCACTCCTTCACAAGATCCACACCTTCACACCGATCACTATTTCCCTAACCCTATCCA TCCACAACCTCGCCCTAACCCTCGCCGTCCCCGCGGTTTCGCGGCCACCGCCGCGGCCAACAACTCCGCCGGCAAGGGCAAGAAGGAGCGGGAGAAAGAG AAGGAACGTACTAAGCTCCGGGAACGTCACCGCCGTGCTATCACCAGCCGTATGCTCACCGGACTCCGTCAGTATGGCAATTTCCCCCTCCCGGCACGCG CGGATATGAACGATGTGCTCGCCGCACTTGCTCGTGAGGCTGGTTGGGTTGTGGAGGCTGACGGAACTACTTATAGGCAGTGTCCACCTCCTTCTCAATT GGGATCATTTGAAGCAAGATCGGTTGAAAATCCACTCTCTGCTGGTTCTTTGAGAGCGTGCTCTGTAAAAGAAACACTAGGGAATCAGCCACATGTTCTT AGAATTGATGGAAGCTTGTCACCTACATCCATTGATTCGGATGTAATTGCGGAAAGGGATTCAAAGAATGCAAGTGCAAGCCCCATCAATTCAGTTGACT GCTTAGAGGCTGATCAGCTTTTGCAACATATTCATTCAGGGGTGAATGAGAATGACTTTTCTGGCACACCATATGTTCCTGTTTACATAAAGCTTCCTGT TGGGATTATTAACAAATTTTGCCAATTGATTGATCCTGAAGGCATTAGGCAGGAGCTAATCCATATGAAGTCTTTAAATATAGATGGCGTCATTTTGGAT TGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGTTATAGGGAACTTTTTAATATCATTAGAGAATTCAAGCTGAAGTTGC AGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTACTGATGCTTTGATTGCCCTCCCACAGTGGGTTTTAGAGATTGGAAAAGACAACCGGGA TATATTCTTCACAGATCGTGAAGGACGAAGGAATACTGAATGCCTTTCTTGGGGCATTGATAAAGAGCGAGTTCTGAAAGGAAGAACTGGGATTGAGGTC TACTTTGACTTCATGAGAAGCTTTCGGACAGAGTTTGATGACTTGTTTGCAGAAGGTCTGATTTCTGCTGTAGAAATTGGACTTGGAGCATCTGGGGAAC TGAAATACCCTTCTTTTTCGGAAAGGATGGGTTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTACACAGAGC AGCCAAATCTCGTGGTCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGAAACTACAATTCTATGCCACATGAAACTGGGTTCTTTTGTGATCGAGGA GATTATGACAATTATTATGGGCGTTTTTTCTTACATTGGTACTTCCAGACATTAATAGACCATGCAGATAATGTCTTGTCTCTTGCAAGCCTCGCGTTTG AGGAAACAAAAATAATTGTCAAGGTTCCAGCAGTATATTGGTGGTACAAGACCGCTAGTCATGCAGCAGAGCTGACAGCAGGATATCACAACCCGACAAA TCAGGATGGTTACTCTCCTGTGTTTGAGGTTCTGAGAAAACATGATGTTACGGTTAAATTCATCTGCTTAGGAGTTCAGCTTTCTAGCCAGGAAGCTGAT GAGTCATTGGCTGATCCAGAGGGTTTCAGTTGGCAGGTATTAAACTCAGCTTGGGATCGTGGGTTGATGACGGCTGGAGAGAATGCACTCCCTTGCTATG ATCGAGAAGGTTACAAGAGATTGGTCGAGATGGCAAAGCCCAGGAATGATCCTGACCGTCGACATTTTTCATTCTTTGTATGCCAACAACCATCTTTGCT TCAGGGGAATGTTTGTTTGACAGAGTTGGATTTCTTCATCAAATGCTTGCACGGTGAAATGGCAGGAGATTTGTAATATGGTTTTTGGGGCATACCCTTA TGGAAGCACTGCATCATTTGTAATTGATATATGTAATTTTTATGTTATATTAATCAATAGAACCCTAAATTATTTGAGAATTTGTAATTAGGTTCCTAAA CTTTAAAAAATTGTAATTAGATACTTGAACTTAATAGAAGCTATGGTCCTTGGACTGCACAATTCAATGGACCCACATCTTTGTGATAAAGATCCATTAA CTGATATGATGCTATTTTTTTATATTATATGTATTGCAATTGACATAAAG
• Tissue: pods
• Gene name: LI_gene_186377;
• Additional information: details;

Expression of Ll_transcript_409101

FPKM

• PAB: 17.7
• PNAB: 14.5
• PS1: 19.1
• PS2: 15
• PS3: 22.6
• PW1: 17.3
• PW2: 20.3
• PW3: 19.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409101

• Blastp: Beta-amylase 8 from Arabidopsis with 65.68% of identity
• Blastx: Beta-amylase 8 from Arabidopsis with 69.83% of identity
• Eggnog: beta-amylase(ENOG410YA7C)
• Kegg: Link to kegg annotations (AT5G45300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423336.1)
• Pfam: BES1/BZR1 plant transcription factor, N-terminal (PF05687.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;