| Id Trinity | TRINITY_DN51620_c0_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_409097 |
| Sequence | GTTTTGACACGTCATTTCTCTTCCTCTCTTCTTCTCCGACACCCGTTCTTCCCTTACCTCACCGTGTCTTCTCTCTTCACACCACACCGCACCACTTTCT CTTTCATCACACTATAACAACACTAACTCTCTTCTCTCATTTCTCACAAACACTATGAAGCAGTTCAAGTCCTTAGGAAGAGAATTCGCCATGGGATCAC AATCCAAAGAACTATTCCACAATCACTCCAAAGAATTTCAACTTCTCATCAACTCCATCGGCGATTCCAGATCCAAATCCGAAGAAGATCGAATCGTCTT CAACCAAATCCAAACCCTAAAAACTCAACTCACCGAACCTAACATCTCCAACCGCAAGTTCAAAGAATTCATCATCACACTCCTCTACATCGAAATGCTC GGCCACGACGCTTCCTTCGCTTACATTCACGCCGTTAACATCACTCACAGCGATAACCTCAAACTCAAACGGACCGGTTATCTCGCCGTTACTCTCTTCC TTCACGATAACCATGACCTCATTATCCTCATTGTTAATACTATCCAGAAGGATCTTAAATCCGATAACTACGTCGTTGTTTGCGCCGCGCTGAATGCCGT TTGCAGGCTCATTAACGAGGACACCATCCCTGCGGTGTTGCCGCAGGTGGTGGAGCTGTTAGGTCATTCTAAAGAGGCGGTTAGGAAGAAGGCCGTTATG GCGCTTCATCGGTTTTTTCAGAAATCGCCGTCATCTGTGTCGCATTTGGTGGCGAATTTTCGAAAAAGGTTGTGTGATAATGATCCGGGGGTAATGGGTG CTGCTTTGTGCCCACTCTTTGATCTTGTGACTGGTGATGCTAACTCTTATAAGGACCTTGTTGTTAGCCTTGTTAACATTCTTAAACAAGTGGTTGAACG CAGGTTGCCTAAGAACTATGATTATCATCAGATGCCAGCTCCATTCATTCAGGTTAAGTTGCTGAAAATATTGGCGTTGTTGGGTAGTGGTGACAAGAAA GCTAGTGAGAACATGTATACTGTTCTTGGTGATATAATCAGGAAGAGTGATTCATCAACTAATATAGGGAATGCTGTTCTTTACGAGTGCATACGCTGTA TCTCTTCCATATATCCCAATCCTATGTTATTAGATGCTGCCGCAGATGTTGTTGCAAAATTTTTGAAGAGTGACAGTCATAATTTCAAGTACATGGGCAT TGATGCCCTTGGTCGGCTGTTAAAGTTAAGTCTAAATATTGCTGAACAACACCAACTGGCTGTGATTGACTGCTTAGAGGACCCTGATGATACTATGAAG CGAAAAACATTTGAACTTCTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGATCGCATGATTGATTACATGATTAGCATTAGTGATGACC ATTATAAAGCCTATATAGCATCCCGATGTGTGGAACTTGCTGAGCAATTTGCACCGAGTAATCATTGGTTTATACAGACCATTAATAAAGTTTTTGAGCA TGCTGGAGATGTTGTGAATATTAAAGTGGCACATAATTTGATGCGATTGATTGCTGATGGATTTGGAGAGGATGATGATACTAAATCTAGTCAGTTGAGA TCGTCTGCTGTTGAATCATATTTGCGCATTATCGGAGAGCCAAAGCTTCCATCTGTGTTTCTTCAAGTAATCTGTTGGGTTCTGGGGGAATATGGCACAG CTGATGGAAAGTATTCTGCTTCGTATATGACCGGGAAGTTATGTGACATTGCCGAGGCATATTCTAATGATGAAACTGTTAAGGCATATGCTATTTCAGC ATTGATGAAAATTTATGCATTTGAAGTAGCAGCCGGGAGGAAAGTGGATATGCTACCTGAGTGTCAATCTTTGATTGAAGAATTATTAGCATCCCACTCT ACAGATTTGCAGCAACGTGCATATGAATTGCAAGCCCTTATTGGTTTGGATGCACAAATTGTTGAAACAATAATGCCACCGGATGCAAGTTGTGAAGACA TTGAGGTTATCGCTGCTAATTCTGGAATCTTCTCATATTAGTAAGGCTATAATATTATGTGTTCAACAATAATGAGTTGGTACAAGGTTATTGCTGCATT TTAAATTATTTGATAGTTGTAACCCAAGCTTTCAATTTTTTCACTGCCTTAAGTATGCAAGTTGTAGTCGTTTGTTTTCACTTTCTCACTTTTCCGTCCT CCTTTCCTTCCCCCCTTTCCATTCTGCTCAAACTTTCAACCATGTAAAGATGATTTTGAACGATATATACATCTATTACATGACTTCTGGTTGATGGTTT TGGATCCATCTGATTGATACTCATTTTTATTTGAGCAACTACAACAACCTAGCCTTATTCCACTAGTTGGTTTGGCTTCATTGATCAATCGACATCATTG AGCCCAATTAGAAACCAAGTGTTCAGTAAAGCCATTTAGAGTAATAATAATTTGTCCCAATGCCTTCTTATGTATTCCTCATTGCCTCTACTTTTTAATT CACAGTATCTTCCATGTGGCCTATTCTTACTGATGAAGCTTCAATTAGTCTCCCCACACTTCCGTACTTCATTAGGTGTACTTTCTGGTTCAATTGCTCA AGCATTGTCTGTATTCTTAGTGCTTCAGTGCTTTTGATTATAATCTCTAATGTATTCACTGTTATTTGAGCATCTATGTATAAGTTTAGTGATACTAAAT ATTTAAGCATTCAAATGCAATCTGTAGAACTTTCAAAGCTTTCTCCTTTTTAAACTTGGTCCTCCAATGAAATACTTTCTCCTTTCAGAAAACAGCTTTG CTTCGCATTACATTAATTTTAATTTTAGCTTTGCTTTGCCTAAAATTGAAATGTTTGCCTACCTTAAAAGTTAAAACCCAGCAACTTGGCTATACTATCT TTTTTGGGGAACAAATGCTTGAAGTATGTCAGTGAAATAAACTGTCTCGCAAATTTATGATAACTAATTTAGAGTTTCTTAGTGTGGTTGTCTTGTTGTT GCCAAATGCTGCTGCTACTATTTTCTTTTTAACAAACAAAAACAATCTGATTTTAGATTCTGTTCTCCCCATATCTTTATTCTGTTTAGTTCTAATTTAT TTGTTAGTTATCTCTCAATTAAATTGTACATTCAAAACATATCTTTGTACCGTTTTCCTGCTGACATATATGACTTGATATTTGATGAAGATTGACTACA ATATTTATACACAGGCCAAGACTAATCAATTCCTAAACTTAAGGGATTTGAAAGTAGTAAAGATAAAGATACAACACCTTAGCTAAATAATATGTCAGCA ATAGCAATTTAAATTTGATTATATACATAAATGTATGTCAGAAATAGCAATTTAAATTTGCATTGTATACATAAATGTATCTTTTGCTAAATGGTAACAG TAATGTGCTTGGCAATGCATACTACATTCTTGTTTTTCTGCTTCAACAAGGCTATTCATGCACTGAATATTATATGCAGGTTGATAAGGACCTTTCTTTC CTCAATGAATATGTCCAGCAGTCTCTAGAAAAAGGTGCTCAACCTTACATTCCTGAGGATGTGCGCACTGGAATGGGGAATATGAGCAGTTTCAGAAGCG AAGATCAGCAAGAACCTTTGCAGCACGGACTGAGATTTGAAGCATATGAAATTCCAAAGCCTCCAATGCAATCAAAGGTTGCTCCGGTTTCATTTTCATC CTCAGCAGACATTGCTTCAGTACCTGAGGCATCATATTCAAGGGAAACCCACCATCTCTCATCAATGGGATCAGCATCAGAAGCTGGATCATCAGAGCTT AAGCTACGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAACCAACTTATACATCTTCAACCTCATCTACCTCATATTCTACTTCTCAAACTCCAGCAAATG GAACAGCTCAGGTGGATGATCCAACAGCTGTCAACTCGAAAGTACGTGATAGTTATGATTCAAGCAAGGCACATGTTGAAATTTCTCTGGAAAAGCAGAA GCTTGCTGCTTCATTATTTGGTGGTTCTACCAAACCTGAGAAAATATCATCCACTAGTCATAAGGTTCCGAAAGCTAGTGCTAGTGCTGCAGACAGATCC AAGGGCTCAAAGACTGCAGGGGTACCCGATGAAGTAGCCATGGAGAGAAAAATTCGTCACCCTCCTCCAGACTTGCTTGACTTGGGTGAACCAACTGTCA TTACTGGTCCTCCTTCTGTGGACCCTTTCCAGCAATTGGAAGAACTTCTTGACCCAAGCATTAGTTCCACAATAAATCATAATGCAGGTGCTGCTACAAA TGTGCTTGATATTATGACACTTTACGCAGAGACTACTGCAAGTGGGCATAGTGGCAGTGGTGGCTATTCTATCCCCGTGAATGGGGATAATTTAAATCTT TTATATGACTTATCAAGTGCAGATATCGGAGTTGCCAGTGCAGAAACATTTGTGACACCTTCGCCACAATCTGTGAATGGTTCAAATGCTAAAGATTCTT TGCAGAAGGATGCATTTGTGAGGCAGATGGGTGTGAACCCTTCAAGTCAGAATCCGAACTTCTTCACGGACTTGCTTGGCTAATCAATTTGCAAAGCCAA TTGTCATTCATGATGCTTGAAGGTGGATTGCATAAGGACCTGCTGTCTGTGGGGTTGCCTGAAACAGTTGGCTATCTGATACATGCAAAATAGAATGATA TAAACTATCGTCAGGCATGGATGGTTTCAGCTCCCTCCATGGGGTGATCCAACATCCACAAATAGTGGCAGAACCAGGTAAAAACTTGTACTCTTAGTAA AATAGCTTTTGTAGTAATTAAATGCACGAGGCTTTCCTTGTTGCATCTAGGTTTTGGTCTGTCTACTCTGGACTTTGAAGGAAGGGTATTGTTGTGCAGG GTTATGTTTGTTGTATCTATGTTTTGATGTTTTTTATAAATAAAAAAACATTTTTGTACATTTTTCTCTTTCCATATAATGTTTTGCTAACAATATGAAG CATGATATTGCGGCTAATAAGATCAGTTTGATGTGTATCACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186379; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409097
| Blastp | AP-4 complex subunit epsilon from Arabidopsis with 40.84% of identity |
|---|---|
| Blastx | AP-4 complex subunit epsilon from Arabidopsis with 79.77% of identity |
| Eggnog | Adaptor-related protein complex(ENOG410XPKK) |
| Kegg | Link to kegg annotations (AT1G31730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421448.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |