Ll_transcript_409106

• Id Trinity: TRINITY_DN51620_c0_g3_i5
• Name Transcript: Ll_transcript_409106
• Sequence: ATTTGTTAAATCCAAATACCAACTGGCGTTGGTTCAAGTGTAGTTAGCCCACTTACCTGTCGCTGTCTATGTTTCCGGCTCGGACAAAATTGTATACGAG ATACAAAAAAAAAAAATTGTTAAATGCAAATAAGGTTGTTGAAACCTTGATTCACCCAATCATCACTGAAACCATTCTTCTTCCATTGAATTCCATGGAG CATTTGAAAACCTTCGGTCGCGAACTCGCCCTGAGTTCCCAATCCAATTTCTCCCAATCGAAAGATTTCCTCTCTCTCATAAAATCCATCGGCGAAGCCC GTTCCAAAGCCGAAGAAGATCGCATCATCCTCCACGAGATCCAAACCCTAAAACGCCACATCTCCGATCCCTCCATCCCCAACCGCAAGATGAAGGAATT CATCATTCGCCTCGTCTACATCGAAATGCTCGGCCACGACGCTTCCTTCGGTTACATCCACGCCGTTAAAATGACCCACCACGATTCCCTCCTCCTCAAA CGCACCGGTTACTTAGCCGTTACTCTTTTCCTCAACCCCGATCACGATCTCATTATCCTCATCATTAATACTATTCAGAAGGATCTTAAATCTGATAACT TTCTTGTTGTTTGTGCTGCTCTTGATGCCTCTTCTCGCCTTATCAATGAGGAGACTATTCCGGCTGTCTTGCCTCAGGTTGTTGATCTCTTGGCGCACTC GAAAGAGGCCGTTCGGAAGAAGGCGGTTATGGTCTTGCATTGGTTTTACCAGAAATCGCCTTCTTCCTTGTCGCATTTGGTTTCGAATTTTCGGAAGCCG TTGTTTGATAACGATCCTGGTGTTATGGGCGCCGCTTTGTGTCCGCTTTATGATCTTATAGTGGCTGATGTTAACTCTTATAAGGACCTTGTTGTTAGCT TTGTTAGCATTCTTAAGCAAGTAGCTGAACGTAGGTTGTCTAAGAGTTATGATTATCATCAAATGCCAGCTCCTTTTATTCAGATCAAGTTGCTGAAAAT ACTGGCATTGTTGGGGAGTGGTGACAAGCAAGCTAGTGAACAGATGTATACTGTTATTGGTGATATAATTAGGAAGGGCGATACATCGAGTAACATAGGG AATGCTATTCTTTACGAGTGTATATGCTGTGTCTCTTCCATATATCCAAATACAAAGTTGTTAGAAACAGCCGCGGATGTTGTTGCGAAATTCTTGAAGA GTGATAGTCATAATCTCAAGTATATGGGTATTGATGCTCTTGGTCGGCTGATAAAGATAAGCCCGCATGTTGCAGAAAAACATCAACTGGCTGTAATTGA CTGCTTAGAGGACCCTGATGATACTTTGAAGCGAAAAACTTTTGAACTGCTATACAAGATGACCAAGTCATCCAATGTGGAAGTGATTGTTGACCGTATG ATTGATTACATAATTAGCATTAGTGATGATCATTATAAAACCTACATAGCATCTCGATGTGTAGAACTCAGTGAGCAATTTGCACCAAGTAATCATTGGT TTATACAGACCATGAACAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAGGTAGCACATAATCTAATGCGATTGATTGCGGAAGGATTTGGAGA GGATGATGATGCTGCTGCGTATAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAA GTCATCTGTTGGGTTCTGGGCGAGTATGGCATAGCTGATGGAAAGTATTCTGCTTCCTATATCACTGGGAAATTATGTGACATGGCAGAGTCATATTCTA ATGATGAAACTGTTAAGGCATATGCGATTTCAGCATTGTTGAAAATATATGCATTTGAGATAGCTGCTGGGAGGAAAGTTGACATGCTACCTGAGTGTCA ATCTTTGGTTGAAGAATTGTTAGCATCCCACTCGACTGATTTGCAACAACGTGCTTATGAATTACAAGCCCTTATTGGTTTGGATGCACCAGCTGTTGAA AAAATAATGCCTCAAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTCTCTTTCCTCAATGACTATGTCCAACAGTCTTTAGAAAAGGGTGCTC AGCCCTACATTCCTGAGGATGTGCGGAATGGAATGGGGAACATAAGCAACTTCAGAAGCCAGGATCAGCTTGAACCTTCACAGCATGTATTGAGATTTGA GGCATATGAACTTCCAAAGGCTCCAGTGCCATCAAAAGCTTCCCCGGTTTCACTTTCATCCTCAACAGACCTTGTTCCAGTACCTGAGACATTGTATTCT AGGGAGGCCAATCATCAGGTTTCATCAGTGGGATTAGCATCAGAGACTGGCTCATCTGGGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAATGGGGTA GGCCAACATATTCATCTCCAACATCTTCCTCAAATTCTACTACCCAAAAACCAGTGAATGGGGTAACCCAGGTAGATTCCGCAACTGCTACGAGTTCAAA AGTACGTGATAGCTTTGACTCAAGAAAGGAACAGATTGAAATTAATCCTGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTGGGTCAACCAAACCT GAGAGAAGATCATCAGGTAGCAACAGGGTTCTGAAGCCTAGTGCTAGTGCTGCAGAGAGATCTCAGGAATCAAAGGCTGCAGCTGTATCCAAAGAAGTAG CTAGGGAGAAAACTAATCATCAACCTCCTCCAGATTTGCTTGACTTAAGTGAACCAACTGTCACTACTGCACCCCCCTCTGTGGATCCATTCATGCAATT GGAAGGACTTCTTGACCCAACTAGTATATCTACAGTAAATCACGGTGACAGTGGCGGTGCTAAAAATGCACCTGATATTATGGCACTCTATGCAGAGACT ACTGCAAGTGGACAAAGTGGCAGTGGTGGCTATTCTATTCCGGAGAGTCTGGATAATGTAAATCTTTTATCTGAGTTGTCAAATGCAGCAATCGGAGGTA CTACTGGAGAGACGGTAGTGATACCTTTGTCCCAACCTGTAAAGGGTCCAAACACTAAAGATTCTTTAGAAAAGGATGCAAAAGTGAGGCAGATGGGTGT GACACCCACAAGCCAGAATCCCAACTTGTTCAAGGATTTGCTTGGCTAATCTTATTAAACTTCAAATTTAAATCAAATGATGCTTGAGGATAGATTACCT TTTGACTTAAGACCAAAGGAATTCCTGAAACAAATTGGCTATCTGATATATGCAAAATTGAATAATATAATTTATGACTAGACATGGATGATTGCAGCCT CAATGACTGGACCAGGTAAAAACTTGTAACAGTTGCAGAATAGCTTTTGTAGCAATTGAATGCATCAGGCTTTCGTCGTTGCGTCCAGGTTTGGCCCACT CTGGACTCTGAAGGAAGTGTTCTATTGTGCATTGTCACTTACACTCATTGGATGTTTTCAGGTTTATCTTTGTTGTTATACTAAAGCTGTGCATTTCCCC ACAACTTTTGTTCATTTTTTCATATCTTTGGTTGGGTGTATGGCATTTGTACACATGACACTCTTTGTGATGATGAAGGTAGTAGCCTAGTATAGTCATC TATTCCTTCCCAGAAGACCATTGTTTCCATGTCTGGTCCTGTTTTGTTTTTCTTCTGTGCTTTTCTATGCTCTTCTGTTGTTTCTGGCATTTCTTCTGTC CATTCTGCCATAAATTTTATGCTGAGTATTAAATGGTATATTGTTTTCTTCTTCTTGACATTGGTGTATGGATTTTGGCTTGTAATTGAGCTTTGCAATT GGACATATTAGGTAACATTAGAAACATTTAAATTCTAGTGCAATTTTA
• Tissue: pods
• Gene name: LI_gene_186379;
• Additional information: details;

Expression of Ll_transcript_409106

FPKM

• PAB: 5.3
• PNAB: 8.7
• PS1: 9.1
• PS2: 7.5
• PS3: 8.8
• PW1: 6.5
• PW2: 6.8
• PW3: 5.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409106

• Blastp: AP-4 complex subunit epsilon from Arabidopsis with 68.39% of identity
• Blastx: AP-4 complex subunit epsilon from Arabidopsis with 67.78% of identity
• Eggnog: Adaptor-related protein complex(ENOG410XPKK)
• Kegg: Link to kegg annotations (AT1G31730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423335.1)
• Pfam: Adaptin N terminal region (PF01602.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;