Ll_transcript_410182

• Id Trinity: TRINITY_DN51636_c3_g2_i1
• Name Transcript: Ll_transcript_410182
• Sequence: AACGGCAACTATTTCATAGATGTTTTGAAATCATTCAAATGATCTATCCAATAATATATAGGTTAACATGGACGTGATCGTCTGCGATATTGATGTTTTT TGTATAAACAACAACAATCAAGCAGAGTCCGACTGCATGGATCAAACGGAGCCATAATGCCCCATCATATATTATGGAAAATCGGTGGAGGTTCGGCAGG CTGCTGGTCTGTATCTGAAGAATAACCTTAGAACTGGATACAAAGCTATGCTCCCTGCATACCAACAGTATTTGAAATCAGAGTTGCTGCCTTGTCTTGG TGCTGCAGATAAGCACATAAGGTCAACGGCAGGCACAATTATTAGTGTTGTTGTTCAAATAGGAGGACTTGTAGAGTGGCCTGAATTGTTGCAAGCGCTC GTTAATTGCTTGGACAGTAATGATCTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAGGATGTTCCCCAATTGCTCGACTCTGATG TACCTGGGTTAGCAGAGCGCCCTATAAACATATTTCTTCCCAGATTATTTAAGTTTTTCCAATCTCCTCATGCATCATTAAGAAAACTAGCACTGGGTTC AGTAAATCAATACCCTATGCTAATGCCTTCTGCTTTATACTTATCCATGGACCAATATCTTCAAGGTTTGTTTATTCTTGCAAACGACCCTAATGCAGAA GTGCGGAAATTGGTTTGTGCAGCATTCGTTCAGATAATTGAAGTCTGTCCATCTTTCTTAGAGCCACATCTAAGGAATGTGATTGAATACATGTTACAAG TCAACAAGGACACAGATGAGGAAGTGGCCCTTGAAGCCTGTGAATTTTGGTCTGCATATTTTGATGCTCAACTGCCACCTGAAAACTTTAGAGAATTCTT GCCTCGTCTGATTCCAGTATTATTGTCAAATATGGCTTATGCAGATGATGATGAATCAGTTATTGAAGCTGAGGAAGATGGTTCCGAACCTGATCGTGAT CAGGATCTTAAACCCCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAGTAGAAGATGAAGATGACGATGTTGTTAACACATGGAATTTACGAAAAT GCAGTGCTGCTGCTCTAGATGTTCTCTCAAATGTTTTCGGAGATGAGATCCTCCCTACTCTTATGCCTATTGTTCAGGCTAAGTTGTCAGCTGGTGGTGA TGAAGCCTGGAAAGATAGGGAAGCTGCTGTTTTGGCTCTTGGTGCCATAGGCGAGGGTTGCATCAATGGTCTTTACCCTCTTTTGTCGGAGATTGTGGCA TTTCTCATCCCTCTCCTCGATGACAAGTTTCCACTGATACGAAGTATTTCGTGCTGGACACTCTCTCGGTTTAGCAAATTTATTATTCAGGGTATTGGGC ATCCAAAAGGCTATGAACAATTCGATAATGTTCTTATGGGTCTTCTGCGAAGAATTTTGGATGATAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCCTT TGCAACACTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATTATACTAAAGCACTTGATGATTGCATTTGGGAAATACCAGAGACGGAAT CTCAGGATTGTATATGATGCTATTGGAACTTTAGCTGAAGCTGTTGGTGGAGAGCTTAATCGGCCTGGATATCTTGACATTCTTATGCCACCATTAATTG AGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTCCTGGAAAGCTTTACATCTATAGCACATGCATTGGGTACTGGATTCACTCAATT TGCTGAGCCAGTATTTAGGAGGTGCATAAATATAATACAGAGCCAACAATTTGCAAAGGTTGATCCTGTTGCTGCTGGGGCACAGTATGACAAGGAATTC ATTGTGTGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGTCTTGGCAGTGGGGTAGAGAGCTTGGTTTCACAATGTTCTTTGAGGGACCTACTTCTGC ATTGTTGTGTGGATGAAGCCTCTGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTTTCACGAGTGTGCCCAATTCATTTACACCCTCGTTTGTC GGAGTTTCTTGAGGCCGCAGCCAAGCAGCTGGAAATTTCCAAGGTAAAGGCGTCTATTTCAGTTGCAAATAATGCATGCTGGGCTATTGGAGAATTGGCA GTTAAGGTCCGTCAAGAAATTTCTCCTGTTGTTTTAACTGTAATTTCATGCCTGGTCCCCATTCTTCAGCATGCAAAGGAACTCAACAAGTCACTTATAG AAAATAGTGCAATAACTTTGGGGAGGCTTGCATGGGTCTGTCCAGAGCTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTTTGGC AATGATAAGAGATGATATTGAGAAAGAGGACGCTTTTAGAGGTCTTTGTGCTATGGTCAAAGCTAATCCTTCTGGAGCTCTAAGTTCGCTCGTGCATATG TTGAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGATGTCTGCCAGGTCTTGAATGGATATAAACAGATGCTGGGCAATGGAG CGTGGGACCAGTGCATGTCTGCTTTGGAGCCCCCAGTAAAAGAAAAGCTTTCAAAATATCAAGTATAATATAATTGTGAGAATTCTGTATCTACATTGGT CTTGTTGGTCAGTTTGTGTTGTCAAGCAATATTGGAGTCATGATTCATTTCAAGGAGTTTTAATCTCGGTCGAGTTTGATTGATTAAAGGCAGTTCCTCA GGCATTGAAGATCTCGTTCGATGGTATTTCCGGTGAGAAATGTACAGGGGGGTGACTTTCAACCTTTGGAAATCCTTGATTCTTTTGCTTGATTCTTTTG TTGTCCTTATAGTTGAAGCCTTAGGTAAAGGCTAGGATTTTATTATACTCCAGTGTTCATCATTTTTCCTATATTTTTATTTAGTTTGAGTTGATAGGTT TGTGCCTTTAATACACAGTTTTGTCCCACCAGAGAGAAAAAGAAGGGAGGGAATTTATGCTCTAATAACTTAAGCTACATTGTTTATAAGGTCCAACTTG GGAACTAATTTCAGACATGTGTTGCCTTAGGCTGAGAACCTTTTCAATTCTGATTTTTTGACAATAAAATATTTGGACTTGTGGATACTTCATTGCCCAA TTGTCCAAAAATGACTTATTTTGGCATATTTATTTGTTTGGGGG
• Tissue: pods
• Gene name: LI_gene_186507;
• Additional information: details;

Expression of Ll_transcript_410182

FPKM

• PAB: 3.6
• PNAB: 4.9
• PS1: 2.7
• PS2: 2.8
• PS3: 4.6
• PW1: 2.5
• PW2: 3.5
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410182

• Blastp: Transportin-1 from Arabidopsis with 75.93% of identity
• Blastx: Transportin-1 from Arabidopsis with 76.02% of identity
• Eggnog: Transportin(ENOG410XPK2)
• Kegg: Link to kegg annotations (AT2G16950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428313.1)
• Pfam: HEAT repeat (PF02985.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;