Ll_transcript_410208

• Id Trinity: TRINITY_DN51636_c3_g2_i13
• Name Transcript: Ll_transcript_410208
• Sequence: ATTTGACTTTATATACTAAAAAAACCTAATAACTAAACTGAACCAAAACCAATGTTGTGATCCAGTTCATAAACAAACCCTTTTATTTGATGTGAATGCC GAACTTCTTTGTTGTCACTATAAAAACTCTGTTACTGTTTATGTCTCTGCGTTTTATTTAAAAACCCTTGTCGTTCTCATCTTCTCTTCTCTCTCTCTCT CTAAACCTCAAAAACTATTTCACTTTTCCGGCATGGCGGCGACACCGACGTGGCAGCCACAAGAGGAAGGGTTCAAGGAGATCTGCGGCCTCCTTGAGCA GCAGATTTCTCCTCTCTCTTCCGCTGATAAGTCCCAGATTTGGCACCATCTTCAAAATTATTCTCACCTCCCTGACTTCAATAATTATCTTGCTTTTATC TTTTCCCGTGCTGAGGGAAAATCGGTGGAGGTTCGGCAGGCTGCTGGTCTGTATCTGAAGAATAACCTTAGAACTGGATACAAAGCTATGCTCCCTGCAT ACCAACAGTATTTGAAATCAGAGTTGCTGCCTTGTCTTGGTGCTGCAGATAAGCACATAAGGTCAACGGCAGGCACAATTATTAGTGTTGTTGTTCAAAT AGGAGGACTTGTAGAGTGGCCTGAATTGTTGCAAGCGCTCGTTAATTGCTTGGACAGTAATGATCTAAATCACATGGAAGGTGCAATGGATGCATTATCC AAGATTTGTGAGGATGTTCCCCAATTGCTCGACTCTGATGTACCTGGGTTAGCAGAGCGCCCTATAAACATATTTCTTCCCAGATTATTTAAGTTTTTCC AATCTCCTCATGCATCATTAAGAAAACTAGCACTGGGTTCAGTAAATCAATACCCTATGCTAATGCCTTCTGCTTTATACTTATCCATGGACCAATATCT TCAAGGTTTGTTTATTCTTGCAAACGACCCTAATGCAGAAGTGCGGAAATTGGTTTGTGCAGCATTCGTTCAGATAATTGAAGTCTGTCCATCTTTCTTA GAGCCACATCTAAGGAATGTGATTGAATACATGTTACAAGTCAACAAGGACACAGATGAGGAAGTGGCCCTTGAAGCCTGTGAATTTTGGTCTGCATATT TTGATGCTCAACTGCCACCTGAAAACTTTAGAGAATTCTTGCCTCGTCTGATTCCAGTATTATTGTCAAATATGGCTTATGCAGATGATGATGAATCAGT TATTGAAGCTGAGGAAGATGGTTCCGAACCTGATCGTGATCAGGATCTTAAACCCCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAGTAGAAGAT GAAGATGACGATGTTGTTAACACATGGAATTTACGAAAATGCAGTGCTGCTGCTCTAGATGTTCTCTCAAATGTTTTCGGAGATGAGATCCTCCCTACTC TTATGCCTATTGTTCAGGCTAAGTTGTCAGCTGGTGGTGATGAAGCCTGGAAAGATAGGGAAGCTGCTGTTTTGGCTCTTGGTGCCATAGGCGAGGGTTG CATCAATGGTCTTTACCCTCTTTTGTCGGAGATTGTGGCATTTCTCATCCCTCTCCTCGATGACAAGTTTCCACTGATACGAAGTATTTCGTGCTGGACA CTCTCTCGGTTTAGCAAATTTATTATTCAGGGTATTGGGCATCCAAAAGGCTATGAACAATTCGATAATGTTCTTATGGGTCTTCTGCGAAGAATTTTGG ATGATAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCCTTTGCAACACTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATTATACTAAA GCACTTGATGATTGCATTTGGGAAATACCAGAGACGGAATCTCAGGATTGTATATGATGCTATTGGAACTTTAGCTGAAGCTGTTGGTGGAGAGCTTAAT CGGCCTGGATATCTTGACATTCTTATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTCCTGGAAAGCTTTA CATCTATAGCACATGCATTGGGTACTGGATTCACTCAATTTGCTGAGCCAGTATTTAGGAGGTGCATAAATATAATACAGAGCCAACAATTTGCAAAGGT TGATCCTGTTGCTGCTGGGGCACAGTATGACAAGGAATTCATTGTGTGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGTCTTGGGAGTGGAGTAGAA AGCTTGGTTTCACAAAGTTCTTTGAGAGACCTACTTCTGCATTGTTGTGTGGATAAAGCTCCAGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACC TTGCACGAGTGTGCCCGATTCATTTGCACCCTCGTTTGTCGGAGTTTCTGGAGGCTGCAGCCAAGCAGCTGGAAATTTCTAAGGTAAAGGAGGCAATTTC AGTTGCAAATAATGCATGCTGGGCTATTGGAGAATTGGCAGTTAAGGTTCGACAGGAAGTTTCTCCTGTTATTTTAACTGTGATTTCATGTCTGGTCCCA ATTCTTCAACATGCAAAGGAACTCAACAAGTCACTTATAGAAAATAGTGCAATAACTCTGGGGAGGCTTGCATGGGTATGTCCAGAACTTGTATCACCAC ATATGGAGCATTTCATGCAACCTTGGTGCACTGCTTTGTCTATGATACGAGATGACATTGAGAAAGAGGATGCTTTTAGAGGTCTTTGTGCTATGGTCAA AGCTAATCCTTCTGGAGCTCTAAGTTCACTTGTGTATATGTGCAATGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGATGTCTGC CAGGTCTTGAATGGATATAAACAGATGCTGGGAAATGGAGCATGGGACCAATGTATGTCTGCTTTGGAGGCCCCAATAAAAGAAAAGCTTTCAAAATATC AAGTATAATACATATGTGAGAATTTTGTATCTACAATGGCCTGGTTGGTCAGTTTGTGTGTTGTGAAGCAATATTGGAGTCTTGATTCGTTATAAGCAGG AGCTTTGTCTCGGTCCAAGTTTTCGGTCAGTGGTATCGGTATTTACACATACATTTCATTTGAGCTTGATGATTGCATGCAGTTCACTCAGTTCTTCAAG ATTTCATTTGATGGTGTTTCCCATGAAAAATGTACAGGGGATAACTTTTCAACCTTTGGAAATGCTTGATTCTTTGTTGTTTTCATAGTTGAAGCCTTAG TTAAAAAGCTAGGATTTTTATGCCACCATTTATCAAATATTTTAGTTTGAATTGATAGGTTTTGTGCCTTTTACACAGTTTTGTACCCACCAGAGAGAGA AAGAGAGAGAGAGAGAGGGTTATATATTACATGTTCTTATAACTCCTAGTTTTCTACCAACATCTACTTATTACATTGTTTGTAAGTGTAGTAACTAGGG AACCAATTTCATGCATGTTTTGTCATTTGAATTTTGATTAGAGACAATAAAATATTTGAACTTGTTTATATACAAATTGAGCAATT
• Tissue: pods
• Gene name: LI_gene_186507;
• Additional information: details;

Expression of Ll_transcript_410208

FPKM

• PAB: 2.1
• PNAB: 3.4
• PS1: 4.6
• PS2: 3.3
• PS3: 3.5
• PW1: 5
• PW2: 3
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410208

• Blastp: Transportin-1 from Arabidopsis with 75.56% of identity
• Blastx: Transportin-1 from Arabidopsis with 75.56% of identity
• Eggnog: Transportin(ENOG410XPK2)
• Kegg: Link to kegg annotations (AT2G16950)
• CantataDB: Link to cantataDB annotations (CNT0002447)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428313.1)
• Pfam: Importin-beta N-terminal domain (PF03810.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;