| Id Trinity | TRINITY_DN51636_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_410192 |
| Sequence | ATTATTCATATGCATGTATTTGATGTAACTCAAATGGAATATTTTATTATTTTTTTAATATTTCATCATTACTGAATACTTAATATTTCCTTTACAAATT CCATTGGTTTGGTTTGCTCATAGTTGAAGGCTTTGGTCTTTCTGGGCTTGCCCTCTGCTGCATGTTTTATGTATGTGTTATTTTGATGACCGCTAGACCC TGTTTACTTTTGCATGCTGCTGTTCTTTTAATTTGACAGTTTATGCCGATAGGGAATTTGGTTAAATGTTATTTGCTCTATTAAGTTATTACTTTTTCTT ATCAATGTTGGAAACAATTGAATCATCCTAGTTGATGTTGATGACCAGGTTTGTGCAGCATTCGTTCAGATAATTGAAGTCTGTCCATCTTTCTTAGAGC CACATCTAAGGAATGTGATTGAATACATGTTACAAGTCAACAAGGACACAGATGAGGAAGTGGCCCTTGAAGCCTGTGAATTTTGGTCTGCATATTTTGA TGCTCAACTGCCACCTGAAAACTTTAGAGAATTCTTGCCTCGTCTGATTCCAGTATTATTGTCAAATATGGCTTATGCAGATGATGATGAATCAGTTATT GAAGCTGAGGAAGATGGTTCCGAACCTGATCGTGATCAGGATCTTAAACCCCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAGTAGAAGATGAAG ATGACGATGTTGTTAACACATGGAATTTACGAAAATGCAGTGCTGCTGCTCTAGATGTTCTCTCAAATGTTTTCGGAGATGAGATCCTCCCTACTCTTAT GCCTATTGTTCAGGCTAAGTTGTCAGCTGGTGGTGATGAAGCCTGGAAAGATAGGGAAGCTGCTGTTTTGGCTCTTGGTGCCATAGGCGAGGGTTGCATC AATGGTCTTTACCCTCTTTTGTCGGAGATTGTGGCATTTCTCATCCCTCTCCTCGATGACAAGTTTCCACTGATACGAAGTATTTCGTGCTGGACACTCT CTCGGTTTAGCAAATTTATTATTCAGGGTATTGGGCATCCAAAAGGCTATGAACAATTCGATAATGTTCTTATGGGTCTTCTGCGAAGAATTTTGGATGA TAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCCTTTGCAACACTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATTATACTAAAGCAC TTGATGATTGCATTTGGGAAATACCAGAGACGGAATCTCAGGATTGTATATGATGCTATTGGAACTTTAGCTGAAGCTGTTGGTGGAGAGCTTAATCGGC CTGGATATCTTGACATTCTTATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTCCTGGAAAGCTTTACATC TATAGCACATGCATTGGGTACTGGATTCACTCAATTTGCTGAGCCAGTATTTAGGAGGTGCATAAATATAATACAGAGCCAACAATTTGCAAAGGTTGAT CCTGTTGCTGCTGGGGCACAGTATGACAAGGAATTCATTGTGTGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGTCTTGGGAGTGGAGTAGAAAGCT TGGTTTCACAAAGTTCTTTGAGAGACCTACTTCTGCATTGTTGTGTGGATAAAGCTCCAGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTTGC ACGAGTGTGCCCGATTCATTTGCACCCTCGTTTGTCGGAGTTTCTGGAGGCTGCAGCCAAGCAGCTGGAAATTTCTAAGGTAAAGGAGGCAATTTCAGTT GCAAATAATGCATGCTGGGCTATTGGAGAATTGGCAGTTAAGGTATTTCAATGCTAAACTGCTGCTTTCTATCAAACTTGACAAAACTTCATACTAGCTG GAATCTAATTGGCATTGCTGGACTTTGGTTCACAAATGGAGTTCTGGATTGTCCTAGTTAACAAGTAGGACAATTTCACTTTTAAAACCTGTGTTAGACA ATAATGAGTATCACGAGTGTGAAGGAATTAAGGAAAGCCCTCAATTTGGTTTAAATGAAATAGAACGGCATGTTGTGTTGTTGTATATGCATTGTCTACT ACATGAATGAACGATATCATTATGCTCTCTCATAAATCATGTTCATTGTCAAAGCATTACTCTCTTAAGTTTTTCCTAATATTTTTACCTATGATTTTTC TTGGTCTCCCATCTGCCTCTAGAAATTGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186507; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410192
| Blastp | Transportin-1 from Arabidopsis with 78.32% of identity |
|---|---|
| Blastx | Transportin-1 from Arabidopsis with 77.47% of identity |
| Eggnog | Transportin(ENOG410XPK2) |
| Kegg | Link to kegg annotations (AT2G16950) |
| CantataDB | Link to cantataDB annotations (CNT0002447) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428313.1) |
| Pfam | HEAT-like repeat (PF13513.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |