Ll_transcript_409872

Id TrinityTRINITY_DN51640_c2_g1_i1
Name TranscriptLl_transcript_409872
SequenceGGAGACAAGTTCGGGACTTTTTTGCTTGGATGAAATTGCAGAGATTGATACTATGAATTGACAGTCTGGTGCTTCAACAGCTGAGCTATCGCCCCACTGT TATTGTCTACACGATTGTATTGCGCTTATATGGGCAAGTTGGAAAGCTAAAACTGGCTGAAGAGACGTTCTTGGAGATGCTTGATGCAGGGTGTGAACCA GATGAAGTTGCTTGTGGTACCATGCTTTGTTCATATGCCAGATGGGGACGCGACAAGGCTATGTTTTCTTTTTATTCGGCGGTAAAAGAAAGGGGCATCA TACTCCCTGTTGCCGTTTTCAACTTTATGTTGTCCTCTTTGCAAAAGAAATCACTCCATAGACAGGTTGCACTATTGTGGATGGATATGATAGGAAAAGG GACGATACCTAATGCTTTTACGTATACAGTAGTCATCAGCTCGCTAATCAAAGAAGGGCTGCATAAAGAAGCTTTAAGGACTTTCGATGAAATGAAGAAT AATGGATTTGTTCCCGAGGAGGTAACTTATAGCCAGCTTATAACTTTAAGTGCTAAAAGTGGAAACAGGGATGAAGTGCTAAGACTGTATGATGATATGA TGCTTCGAAGAATAGTTCCTAGTAATTACACTTGTGCTTCACTTCTGGCTCTGTATTACAAATACGAGGACTTCTCAAGAGCCCTCTCCCTCTTTTCGGA AATGGTAAGGAACAAAATTCCCGCTGATGAAGTTATATATGGTTTGCTTATAAGAATTTATGGAAAGCTTGGTTTATACGAGGATGCTCACAAGACATTT GAAGAGACAAAGCAGAAGGGCCTGTTGACCGATGAGAAAACATATTTGGCAATGGCACAAGTCCATCTTAGTTCAGGAAATGCAGACAAAGCTTTGGACA CTATCGAGCTCATGAAGTTTAACAACGTATGGTTCTCTCGATTTGCTTATATTGTCCTGCTGCAATGTTATGTGATGAAAGAAGATGTAGAATCTGCTGA AGGATCATTTTTAGCTCTCTGCAAGACAGGACCACCTGATGCTGGTTCTTGTAATGATATGCTCAGTCTCTATATAAGACTTAATTTGATGAACAAGGCC AAGGAATTCATTGCCCGAATAAGGGAAGGTGATATACTTTTTGACGAGGTGCTTTATAGGATGGTTATGAAGGTTTATTGCAAGGAAGGAATGCTGCTAG AAGCTGAGCAATTGACAAATCGGATGGTTAAGAATGAATCTCTTAGAAAATATAAATTTGTCCAGACATTTTATTGGATTCTTTGTCAGTGTAAAGAGGA TGTGCAATCTGATGATGAGCTGCTAGCCATTGAGCCTATCGACAAACTTGACACTACAGCTCTTGGGCTGATGCTCAGTTTATATCTGACAGATGGCAAC TTCGGCAAGACAGAAATGTTATTGAAGTTATTGCTGGGTTATACCGGGGGATCAAAAATTGTTAGTCAGCTAATCACCAGTTTGACTAAAAAGGGAGAAA TCAGTAAAGCAGAATCGCTTAACAATCAACTAATTAGGTTTGGCTATGGAATGGATGAAGCCACTGCAGCTTCTTTAATTAGCCGTTACGGAAAACAACA TATGCTGAAACAAGCTGAAGATATATTTGAAGCATATGTAAAGTCTCCTATATCTAGTAAACTATTATATAACTCTATGATTGATGCATATGCTAAATGT GGTGAACAAGGAAAAGCATATTTGCTTTATAAGCAAGCAAGAGAGGAAGGGCATGAACTGGGCGCAGTTGGAATTAGCATTGTCATAAATGCTTTAACAA ATGAAGGTATGGTCATGGAATAATAAAGTAAACTTGAATCCGATCTTTATATCAACTTAACACATGCACAGGCAACACCTTGCTCTCTCATATGGTTCTA AAAACAGATGAAATACATTAGAACTTAGACCAATTCATGCAGTCTTTCGGGTTTGGAGTAAGACATAAATCCCAGTTATGTTAAATCTGCAATTTTTATC TGCTGAGTGTCAACTGATCGTGTTGTTGTTGCTGTGTCGACTGATCATGTCATATGAATGACTTATTGTGAAATGTCTTTTTAAGAGCATACAGAATTGT TTGAAAATCAAACAATTGCTCTATTTATTTCAGGAAAAAAACAGAAATTCTTGGGAGTGTCACGTGTTCTTTGTTGCATCTCCCTTTAGCAATTACCATT CAGTTATTTAGCATTTAATTGACAATTCTAAGCATTATTCTTTCTCAGGAAAGCACCAGGAGGCAGAGAATATTATCCGCAGGAGTCTCGAAGGAAACTC AGAGCTTGACACTGTGGCTTACAATACCTTCATCAAAGCCATGCTTGAAGCAGGCAAATTGCAATTTGCATCCAGTATATATGAGCACATGTGTTCTATC GGTGTTGCTCTGTCAATACAGACACTTAACACCATGATAAGTGTCTACGGAAAAGATCAAAAGTTGGATAAAGCTGTGGATATGTTCAACAAGGGTCGCT CATTGGGTTTGCCTTTGGATGAAAAAGCATACATGAATTTGATCGGCTATTATGGGAAGGCTGGTA BLAST
Tissuepods
Gene nameLI_gene_186539; 
Additional informationdetails; 

Expression of Ll_transcript_409872

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_409872
BlastpPentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 53.86% of identity
BlastxPentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 55.32% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G27270)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432635.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;