Ll_transcript_409893

• Id Trinity: TRINITY_DN51640_c3_g2_i4
• Name Transcript: Ll_transcript_409893
• Sequence: TTCAATAACACTTCTGCGTCATCAAAACGACACTGAAAAGACCAAAACGGTGCGAATATACACACCATACACAATCTCTGTCTCTTCCTCCTTCAAAATC AAAAGTCTTCACTTTCTACAATCCACGTTATACGTCGTCGTTTTAACTTTTAAGCTTGTTCACGAGAATCTAGGGTTTCTGTAGAAGAAGAAGATGACTA CTATGGAAAGCTTGATTGGGTTGGTGAATCGAATTCAGAGAGCTTGTACTGTGCTTGGTGACTATGGAGGTGATGATAATAATACTTTCTCTTCTCTATG GGAAGCTCTTCCTTCTGTTGCTGTTGTTGGTGGCCAGAGTTCGGGGAAATCTTCAGTTTTGGAGAGCATTGTTGGTCGTGATTTTCTGCCTAGAGGATCA GGAATTGTTACTAGGCGTCCATTGGTGTTGCAGCTTCATAAGATTGAAAGTGGGGCACAAGAGTATGCCGAGTTTCTTCATCTACCAAGAAGAAAGTTCA CTGATTTTTCTTTTGTCCGAACGGAAATTCAAGATGAAACTGATAGATTAACGGGGAAGACAAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTA TTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTGCCGGGTTTGACCAAAGTTGCTGTAGAGGGACAGCCTGAGAATATTGTTCAAGAAATTGAAACC ATGGTTCGATCTTATGTTGAGAAGCCTAATTGCATCATACTAGCAATATCTCCAGCCAATCAAGACATAGCAACTTCTGATGCTATTAAAATTTCCAGGG AAGTGGATCCCTCAGGTGAAAGGACATTTGGGGTGTTGACAAAGCTGGATTTGATGGACAAAGGAACTAATGCATTGGAAGTCATTGAAGGAAGATCTTA TCGTCTGCAACATCCGTGGGTTGGTATTGTAAATCGTTCTCAAGCAGATATCAATAAAAATGTTGATATGATTGTGGCTAGACAAAAGGAGCGTGAGTAT TTTGCAACTAGTCCTGATTATGGGCACTTGGCTAATAAAATGGGTTCAGAGTACCTTGCAAAACTTCTCTCACAGCACTTGGAGTCAGTAATTAGGGCAC GGATACCTAGTATAACATCTTTAATAAACAAAAGTATTGAGGAACTTGAATCGGAGATTGGTCATCTTGGGAGACCTATTGCCCTTGATGCTGGGGCTCA GCTATATACCATCCTAGAACTTTGTCGAGCATTTGAGCGGATATTCAAGGAGCATTTAGATGGAGGGTAAAATATTTTCTTTTCAAGTAACAACTTACGG ACTTCATTGACCACTCAACTTGTTTATTGTTCATTTGTTCCTATAAAATTTGTTTAGTTTTATTTCTTTTAACATTTGTCTGCTTTGATCTGATATGTTG TTTGCATAATATTTTACATTTTTATTCTTAGGCGGCCAGGGGGAGATAGGATATATAATGTTTTTGACAATCAGCTTCCTGCTGCTTTACGAAAGCTTCC ATTTGAACGTCATCTTTCTCTCCAGAATGTAAAGAAAGTGGTGTCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCTGAGCAAGGTTACCGGCGC CTGATTGAGGGGTCTCTCAATTACTTTAGAGGCCCAGCTGAAGCTTCAGTAGATGCTGTTCACTTTGTATTGAAAGAACTTGTGAGGAAATCTATCGCTG AAACTCAGGAACTGAAGCGATTCCCAACTTTTCAAGCGTTACTAGCCACAGCTTCAAATGAGGCTTTGGAAAGGTTTCGTGAAGAGGGTAAGACGACAAC TCTGCGGCTTGTAGATATGGAATCTTCTTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAAGAAGTGGAGAAAACTGCAAATCCTGCTCCCTCGAAT GTTGATCGATATGCAGAGGGTCATTTCAGGAGAATTGGATCAAATGTATTGTCCTATGTAGGGTTGGTGTCGGACACTCTTCGAAACACCATTCCAAAGG CTGTGGTTTATTGTCAGGTCAGACAAGCAAAACAATATTTGCTAAGCCATTTCTACACAGAAATAGGGAAGAAAGAGGTATACACTATACACTCTCTCTT ACTATCATGTATAAAACCTAACCTCACAAGCATAACAGTCTTTGCTAATTTCTAGCCGCAAATAATGACGGACGAATAAACTACTCTCTTCCTCTGGTTA ATTTCAAAAGAAAAGGAAAGAGAAGCTCTTGCCCTCACTTTTTTGTGTTTATCTATTTGACATGAATATGAATATTATTGGAAAATTAGTATGATGTGGA CCTAACAGAATACAACAAAGAGCTTTGTTTTTTCTAAACTCCCAACTTGTGTGTCAAATTTTTTTCTTCACAAGTACAAATATACACCAGAAACTAGTGT ATCAGCTTATGTGTCTCCCTTTCATGATGAACTGATCCTTCTCTAGTTTCAATATATCGTTGTCGATAAGACTTAATACCTTTGTCATCGTTCGAATAGG GTAAGCAACTATCGATAATGTTAGACGAAGACCCTGCATTGATGGAGAGGAGACAACAATGTGCCAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGA AATTGATTCCGTTTCTTGGGCACGATGATGAGCGTCGCTGCTAACTGAATGTCTTCCTCGGACTTGTTCTTCACTGTTACCGATAATAGCTATTGATTAT GGGTTGGCTGCACCCAGATGTAATGTACATATTTATCATTGTATTTATTTTGAGACATTCTATATCTTTCTTAGATTGTAGGTGTGATGTACATGTATGA TACATACAAACCACAATCTTGGCTATGATATGTAAAATTAATTTCTAGTGCTTGTTCTGTGTTCTCTTATTCTGC
• Tissue: pods
• Gene name: LI_gene_186543;
• Additional information: details;

Expression of Ll_transcript_409893

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409893

• Blastp: Dynamin-related protein 1E from Arabidopsis with 85.52% of identity
• Blastx: Dynamin-related protein 1E from Arabidopsis with 70.9% of identity
• Eggnog: Dynamin family(COG0699)
• Kegg: Link to kegg annotations (AT3G60190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413869.1)
• Pfam: Dynamin family (PF00350.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;