| Id Trinity | TRINITY_DN51640_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_409894 |
| Sequence | CTTGTCTCTTTCTCTCTGTGAAGTGTGAACCTTGTTTTCTTCAAATTTCAAAACCCAGAATTCACTTTCTACAATTCCATTATACGTCGTCGTTTTTGCC TTCACCCTTAGAATCTAGGGTTTCATCGAAGAAGAAGAAAATGACTACTATGGAGAGTTTGATTGGTTTGGTGAATCGAATTCAGAGAGCTTGTACTGTG CTTGGTGATTATGGAGGTGCTGATAACAACACTTTCTCTTCTCTTTGGGAAGCTCTTCCTTCTGTTGCTGTTGTTGGTGGACAGAGTTCGGGAAAGTCTT CAGTTTTGGAGAGCATTGTTGGTCGTGATTTTCTGCCTAGAGGATCAGGAATTGTTACTAGGCGTCCATTGGTGTTGCAGCTTCATAAGATTGAAAGTGG AGCAGAAGAGTATGCCGAGTTTCTTCACCTGCCAAGAAGAAAGTTCACTGATTTTTCTTTGGTCCGTGCAGAAATTCAAGATGAGACTGATAGAATAACG GGGAAGACAAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTGCCGGGTTTGACCAAAG TTGCTGTAGAGGGACAGCCTGAGAATATTGTTCAAGAAATTGAAACCATGGTTCGATCTTATGTTGAGAAGCCTAATTGCATCATACTAGCAATATCTCC AGCCAATCAAGACATAGCAACTTCTGATGCTATTAAAATTTCCAGGGAAGTGGATCCCTCAGGTGAAAGGACATTTGGGGTGTTGACAAAGCTGGATTTG ATGGACAAAGGAACTAATGCATTGGAAGTCATTGAAGGAAGATCTTATCGTCTGCAACATCCGTGGGTTGGTATTGTAAATCGTTCTCAAGCAGATATCA ATAAAAATGTTGATATGATTGTGGCTAGACAAAAGGAGCGTGAGTATTTTGCAACTAGTCCTGATTATGGGCACTTGGCTAATAAAATGGGTTCAGAGTA CCTTGCAAAACTTCTCTCACAGCACTTGGAGTCAGTAATTAGGGCACGGATACCTAGTATAACATCTTTAATAAACAAAAGTATTGAGGAACTTGAATCG GAGATTGGTCATCTTGGGAGACCTATTGCCCTTGATGCTGGGGCTCAGCTATATACCATCCTAGAACTTTGTCGAGCATTTGAGCGGATATTCAAGGAGC ATTTAGATGGAGGGAGGCCAGGGGGAGATAGAATATATAATGTCTTTGACAATCAGCTTCCTGCTGCTTTACGAAAGCTTCCATTTGACCGGCATCTTTC TCTCCAGAATGTAAGGAAAGTGGTCTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCCCCCGAGCAAGGTTACCGGCGCCTGATTGAGGGGTCCCTA AGTTACTTTAGAGGCCCAGCTGAAGCTTCAGTAGATGCTGTTCATTTTGTATTAAAAGAACTTGTGAGGAAATCCATAGCTGAAACTCAGGAACTGAAGC GCTTCCCAACATTTCAAGCTGAACTAGCCGCAGCTTCAAATGAGGCTTTGGAAAGGTTTCGTGAAGAGGGTAAGAAGACAACTCTCCGTCTTGTAGATAT GGAATCGTCTTATCTCACCGTGGATTTCTTCCGGAGACTTCCTCAAGAATTAGAGAAAACTGCAACTCCTGCTCCCTCAGATGTTGATCGATATGCAGAG GGTCATTTCAGGAGAATTGGATCAAATGTATTGTCCTATATAGGATTGGTGTCTGACACTCTTCGAAACACTATTCCAAAGGCTGTAGTTTATTGTCAGG TCAGACAAGCAAAACAATATTTGCTAAGCCATTTCTACACAGAAATAGGGAAGAAAGAGGTATACACTATACACTCTCTCTTACTATCATGTATAAAACC TAACCTCACAAGCATAACAGTCTTTGCTAATTTCTAGCCGCAAATAATGACGGACGAATAAACTACTCTCTTCCTCTGGTTAATTTCAAAAGAAAAGGAA AGAGAAGCTCTTGCCCTCACTTTTTTGTGTTTATCTATTTGACATGAATATGAATATTATTGGAAAATTAGTATGATGTGGACCTAACAGAATACAACAA AGAGCTTTGTTTTTTCTAAACTCCCAACTTGTGTGTCAAATTTTTTTCTTCACAAGTACAAATATACACCAGAAACTAGTGTATCAGCTTATGTGTCTCC CTTTCATGATGAACTGATCCTTCTCTAGTTTCAATATATCGTTGTCGATAAGACTTAATACCTTTGTCATCGTTCGAATAGGGTAAGCAACTATCGATAA TGTTAGACGAAGACCCTGCATTGATGGAGAGGAGACAACAATGTGCCAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCCGTTTCTTG GGCACGATGATGAGCGTCGCTGCTAACTGAATGTCTTCCTCGGACTTGTTCTTCACTGTTACCGATAATAGCTATTGATTATGGGTTGGCTGCACCCAGA TGTAATGTACATATTTATCATTGTATTTATTTTGAGACATTCTATATCTTTCTTAGATTGTAGGTGTGATGTACATGTATGATACATACAAACCACAATC TTGGCTATGATATGTAAAATTAATTTCTAGTGCTTGTTCTGTGTTCTCTTATTCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_186543; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409894
| Blastp | Dynamin-related protein 1E from Arabidopsis with 80.68% of identity |
|---|---|
| Blastx | Dynamin-related protein 1E from Arabidopsis with 80.55% of identity |
| Eggnog | Dynamin family(COG0699) |
| Kegg | Link to kegg annotations (AT3G60190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413869.1) |
| Pfam | Dynamin family (PF00350.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |