| Id Trinity | TRINITY_DN51645_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_408537 |
| Sequence | GCTGGTACAAGCAACTATCACAACTCCGCTCTCGTTTTCCTTCTCTCTTTCTCGTGTGTATATAAAGAGCCACCCACACCTCACCACCAAAACACAAGCA ACATCATCTCTTTTCCCCCCTCTCTCTCTCACTGTTTACATGCAAAACCGTTTCTAGGGTTTTCACCTTTTCTCCCTTCTCTCTTTCAATTTCAGTAACC GCTTCTCCGATACCGCATTTCAATGGCATTTCCGGCGAAGAAGCTCATCGGCGATCCCATTAATGTTGTGACTGAATTCATTGATGGTCTTGTGGAGACA TATCCTGGCTTACAGTATTTAGATGGCTTTCCTCAGGTGAAGGTTGTTTTACGCGCTGATGTTCCATATGCAACATACGATAAGGTTGCAGTAATATCAG GGGGAGGAAGTGGCCACGAGCCTACTCATGCTGGATTTGTCGGAGAAGGAATGCTGACTGCAGCCATCTGTGGAGATGTCTTTTCTTCTCCACCAGTTGA TTCCATTCTAGCTGGGATACGAGCTGTAACTGGTCCAATGGGGTGTCTTCTGATTGTAAAGAACTATACTGGTGATCGCTTGAACTTTGGTTTGGCCGCT GAGCAAGCAAAATCTGAAGGTTATAAAGTGGAGACTGTCATTGTTGGGGATGATTGTGCACTACCTCCACCTCGAGGGATTGCTGGAAGAAGAGGTTTAG CAGGGACTATTCTGGTTCATAAGGTTGCAGGAGCTGCTGCAGCTGCTGGCCTTTCTCTTGCTGATGTTGCTGCTGAAGCTAAAAGTGCATCTGAAAAGGT GGGGACGATGGGTGTTGCTTTAACAGTGTGCACACTTCCTGGTCAGGTTACATCAGATCGTTTGGGCCCAGGAAAGATGGAGTTGGGTCTTGGAATTCAT GGAGAGCCTGGTGCAGCTGTGGCTGATCTCCAGCCTGTAGATGTGGTGATTTCTCATGTTCTGAAGGAAATATTGTCCACGGTATGCCACAATATGTCTG GAGGTCTCTTGGCCGAATTATACGGATTAACTGTGAACAAAATGCTCTCATAACATTTACTGTGCCATCACATCAAAAAAATAAAAGAAATACTGGTTTG TGATGAACATACTTTTTTCTCTATATATTTTTCTGACATGACTTCTATGTGCCATGTCTTGAACTCTCAATTTTTATTTATGTATTTATTTTTTTCTATT TCATATATGTATACTACTCAATATCATTTTTTGCATTGAGTATGCTAACCTTGCAAATTGGTCAGTTTGTTTTTATTTAGTGGGTAAAAAGAATAAATGG TTTTTTAATTGCAATTAACTTTAAGCACCTACTGACACTAGCGCCTAATTATTAGGATAAGGTCTTTACATATATTGGATTATATCAGGATAGATTAATA TAAATAAGAGAGGCAGCAGGAAAGTACATAGATGATGAGTTTTCCTCTGAATTAAATCAACAATAAATAACGACACATGAAAATTGGGGAGGATATTCAA ATGTGGCCTCTGATCAAGATGTTAAGTCCAGGGGGGATGGCTTTATTTACTTATCGTAAATTTTTACTCTTGCTTCAGTGGGAGATGCTTAAGTGTATTC ACTAAAATGGCAGTGCTTCAGTGGGAGTGCAAATAATGTTGGTTTAATGGAAGTAAGGATGTTGGGGTTTTCTGATGAAAATCTTCTCTCAAGGATAGTC AAATATAAGCAGCACCAAGCAGAAAACAATTTGATGAAAGCAGCAGATAAATTAGATAAGGAATTGTTGGAAATCCTATAATCTGTAGCCAGGAAATGTT GTGAACATAGTAAATGAGTTCACTGTACTGTTTATATTTTATAAATAAATGGCAACAAAACTATTCTTTTCTCCCCCTAATTTATCTGTAAATCAAAATT TGAGAAATTAATCCGTAGTAGTTTTTTCAACAAAAAAGTTTATAACTGTTTGTATGTCCTTGTATGCAGTGCGATTATTTTTCTTTGTAATGAGTTACAC TACTTTTTTGTTGGTGATGTCTCCAGGAAACAAACTATGTTCCAATCACACGAGGCGGCAGGGTGGTGCTCATGGTCAACGGGAAAGGCAGTTCCAAAAT TGCAGCTGGAGCATGGACTGGCTGTTGATAGAGTTTATACAGGGTCGTTTATGACTTCTATTGATATGGCAGGTTTCTCAATTTCTATCATGAGAGCTGA TCCACCTATTCTTCAGCGATTAGACGCAGCAACCAAAGCACCATACTGGCCTGTTGCAGTTGATGGTAATCGCCCGCCTGCTAAGATTCCTGTTCCGGTC CCCCCATCCCCATCAGCAAAGAGTGACGAGGTATATACATGAAAATCTGTCATTTCCCTCACATGACATGTAACAATTGTGGTATCATGCGAATTCTTAG TCAAAAGTAAATAAGCATGGATATAATTGTGGATTTGTGGTTTTTGTCTTGATAATTTATTTTTTAAATTTCCAGACCTTATAATATTTCTAACTGCTTT CTGAATAAGACATTTTTAGCACATAAACATTGGAAGAACTAAAAGGTAAGCATATTTCACGTGCATGTTGTATCTCAATTAATTATATCTACCAAGTATT GTTCTAGTTTCCTTGAGGCTTCATTTGGTTCACAAATTTTTTCTCAATTTGTTCCATATTTTTCTTGATATTGATGCAATAGTCCAACTTCAACCATTTA AAACCCTTCCCTTCTGACCATCTATTGTTGTACTTCTTGCTAGAAGCATCCATCATCTGGCCATCTGTAGCTATCATTTGTACTTCCTCAAGATTATGTT ATCTTCCTCTTCCATGTTCATACATATGTAAAAGTGTGGAGTGAATTTTGCATTTGAGAAGAAACTCGTGTTACATATATCAATTTTTTTTATTAGGATT ATATTTAATTTAATGCAATAATAATTAAAAAAGAAAGATTAAAATTGTCAAGGGTCAAGATGACATACATCCAACCAAATTATTAGTTTAACAACCTTAC CCTTGCATGTGAATAGGTTATTTTCAGGATTAGAACCCATGACCTCCAGGTCACAAGGCAGATAACCTTTCCGTTGCATTGATGCTTCCACCCTCTTAGG GTGCAAGTCAATCAGTTGGTGAAAAATCATATAACTTAGCATTGTTTGTATATGAAAAGAATTCTTCAATTTTCACTGTGAATAATGTTCTTTTATGCAG CTCTTCTTTTATTTGTGCCAATTTACGGAAGATTTTGTGTTCCTTTTGTCAACTGAGGAAAATAGACACTTTATCTCAGTTTTTTAAAAATATGTTTTCT TACTTTTTTTAATATAAGTTGTGATATCTGACTTCCATATGTTTTTTTATACAAGCCACGGAGTCGTCCACTGCAACTAAATGAACAAGGCCAAATTCTT GAGGCAGCCATTGAAGCTGCTGCTAATGCAATTCTAAATCTTAAGGACAGTCTAAATGAATGGGACAGTAAAGTTGGTGATGGTGACTGCGGGTCTACTA TGTATAGAGGTGCAAAAGCAATTCTTGAGGACATCAAAACCTACCCTCTGAATGATGCTGCAGAAACTGTCAGTGAAATTGGATCGACAATTGGAAGAGC TATGGGGGGAACAAGTGGGATCATATATACAATATTTTTTAAGGCGGCATATACACAACTGAAAGCAAGCCCACATTCTGATGTCACTTCAAAGCAATGG GCTGAAGCACTGACAGCTTCTATTGCCGCTGTAAGTAAATATGGGGGCGCTAGTGCTGGTTACAGAACATTGCTAGATGCCCTCAGTCCAGCATCGTTAG TTCTTCAAGAGAAACTTGATATTGGTAATGATCCTTCCACTGCCTTTGTCCTTTCTTCTGAAGCTGCATTAGCTGGAGCTGAGTCAACCAAGCACATGCA GGCACAGGCTGGGCGTTCTACTTATGTGTCTGCAGAGATTCTGTCATCAGTTCCTGATCCTGGTGCAATGGCTGCTGCTTCATGGTACAGAGCTGCAGCT TTAGCTGTGAAGGAAAAAAAATACAAGAGTTAGGAGACATACAATTCTTGTTTACGCGGATTTAGGCAAGTTTTGGTCGTGAGTTTGAATTCCTGTCACC ATTAGGTTCTCCGCTTATGTCTTTATGCGTAATGCTGAGAGGGCGATTGAGAGACAGTTTTATCAATGCCAATGCCAAAATTCAAAGTGGATGTAAATTT GAGCACTTGATGACTAGTTGACTACAATCGACAATAATACCAATTTTCTCTGTTGGTCTATTGATTATCAGATCAATTTTATGTGCATCAAAATTTATGT GTATCTTGATTGCTGCTGTTAAGAATGCTCGACTGGCTTGATTCTTGCATACCCGAGTGTGTGGGGTTTGTTGAAATTACGCCTTTATGAAAATTGTTTG ATTAATATGCAAACCCATAAGGTGGAATTTCGTGGAAAGCTCATTTGAGAATATGAAATGCGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186581; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408537
| Blastp | Putative 3,4-dihydroxy-2-butanone kinase from Lycopersicon with 89.68% of identity |
|---|---|
| Blastx | Putative 3,4-dihydroxy-2-butanone kinase from Lycopersicon with 89.68% of identity |
| Eggnog | Dihydroxyacetone kinase(COG2376) |
| Kegg | Link to kegg annotations (544126) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431365.1) |
| Pfam | Dak1 domain (PF02733.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |