Ll_transcript_410220

• Id Trinity: TRINITY_DN51648_c5_g1_i1
• Name Transcript: Ll_transcript_410220
• Sequence: AGAAAATGGGAAGTTGAATCTCTCTGGTTTGAGAGAAGTAGCGTTGGTTTTGATTGAGAGAAAGAGAAAGAGAAAGAGAAAGAATCGCATGAACTTGGAA AGATGAACGGTTGGGATGGAATCGAATCTGAAGCTTCATCTCTCGCTTCTCGATCCACTTCTACTCAACCTGTTCGACTCGGCCGAGTTCAACCTCAGCC TCCAACTCATCGCACCATTTTCTCCAATCATCGCGATGCCAATCTCCACGTCCGCTTCAAGGGGAATTCAATATCAACTACAAAGTTCAACTTTTTCACT TTTTTGCCAAAAGGATTGTTCGAACAGTTCAGACGGGTGGCCAATCTCTACTTTCTTACAATCTCAATATTGTCAACCACACCAATTAGTCCCGTGTCTC CAATAACTAATGTGCTTCCACTATCTCTTGTGCTTCTTGTCTCTCTTATCAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCCATAAA CAATAATACAATAGATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCATGGAAAAAATTGCAGGTTGGAGACATAATCAAGGTTAAGCAGGATGGATTC TTTCCTGCAGATCTGCTTTTCTTGGCTAGTACAAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGA AAGCATTGGAAAAGACTTGGGATTACCTGACACCAGAGAAGGCATCCGAATTCAAAGGTGAAATTGAATGTGAACAGCCAAACAACTCATTGTATACCTT CACTGGGAATCTTATACTTGAAAAGCAAACACTACCTCTCAGTCCAAACCAAATTTTGTTACGAGGGTGCAGTCTCAGGAATACAGAGTATGTTGTTGGG GTTGTTATTTTTACTGGACATGAAACTAAGGTGATGATGAATACAATGAATGTCCCTTCCAAACGAAGTACATTGGAGAGGAAGCTTGACAAGCTAATAC TCGCTCTATTTGCTACTCTCTTTATGATGTGTTTTATTGGAGCCATAGGCAGTGCTATCTTCGTGAACAAAAAGTATTTCTACTTACACCTTGATTCATC AGAGGAAGGCTCAGCGCAGTTCAACCCAAGAAATAGATTTGTTGTTTTTATTCTGACTATGTTTACCCTTATCACACTGTACTCCACAATTATCCCCATT TCACTATATGTGTCTATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCAT TGGCCAGAACATCAAATTTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTTTTCAA GTGTTCCATTGGAGGGGAGATCTATGGTAATGGTGTGACTGAAACTGAGAGGGGAATAGCAGAGCGCAATGGCATTAAAATTGAGGAAAATAAATCACCC AATGTAGTGCAAGAAAAGGGTTTTAATTTTGATGATGATAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATTTCTGCAAGGAATTTTTCA GATGCCTTGCTATATGCCATACTGTACTTCCGGAGGGTGAGGAGTCCGCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTTAT TGCTGCGAAGCACTTTGGTTTCTTCTTTTACAGGCGAACACCTACAATGATATATGTTCGAGAATCTCATGTTGAGAAGATGGGCAACGTTCAAGATGTG TCTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTAATATGTCGTTATCCAGATGGCAGACTTATGCTATACTGTAAGG GTGCTGATAATGTAATCTATGAGAGACTGGCTGATGGTAATAATGATATCAAAAAAGTGACTAGGGAACATTTAGAACAATTTGGATCTGCTGGACTACG CACATTATGTCTGGCCTACAAAGAAGTGCATCCTGGTGTTTATGAAAGCTGGAATGAGAAGTTTATTCAGGCCAAGTCTTCTCTACGTGATCGGGAAAAG AAGTTAGACGAGGTGGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAG AGACTCTTCAGAGAGCTGGTATTAAAATTTGGGTTCTTACTGGGGATAAGATTGAAACAGCAATAAACATAGCCTATGCATGCAGTTTAATAAACAATGG GATGAGACAATTTATTATCAGTTCAGAAACTGATGCAATTAGAGAAATGGAGGAGAAAGGTGACCAAGTAGAAACTGCACGATTTATTAAGGAAGAAGTT AAGAATCAGTTGAAGAAGTGCCTTGAGGAAGCGCAGAGCCATCTTCGCTCCTTGTCTGGACCTAAATTAGCACTTATCATCGATGGAAAATGTCTAATGT ATGCATTGGATCCAAGTTTAAGAGTGATGTTGTTGAATTTAAGTTTGAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCACAGGT TACAAGTATGGTCAAGAAAGGTGCGCATAAAATAACACTAAGTATTGGTGACGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGC ATAAGTGGGATGGAGGGGATGCAAGCTGTGATGGCTAGTGATTTTTCAATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGT CGTACCTTCGAATATGCAAGGTCGTCATATACTTCTTTTACAAGAATCTTACGTTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGG TCAGCGATTCTATGACGATTGGTTTCAGTCACTATATAATGTCATCTTCACTGCACTCCCTGTGATCATAGTTGGACTATTTGACAAGGATGTCAGTGCA TCTCTATCCAAGAAGTATCCTCAACTGTACATGGAGGGAATAAAAAATGTCTTCTTCAAATGGAGAGTTGTGGCTATATGGGCCTTCTTTTCGGTATACC AGTCTCTAGTATTCTTCTATTTTGTGAGCACAACAAACTTAAGTGCTAAAAACTCTGCTGGAAAGGTATTTGGACTCTGGGATGTCAGCACAATGGCCTT CACATGTGTTGTAGTAACGGTCAACTTGCGACTACTTTTGATTTGCAATTCAATCACAAGATGGCACTATGTTGGTGTTGGTGGAAGTATATTAGCCTGG TTTCTTTTTATTTTTATATATTCAGGGATTTCCACTCCTTATGATCGACAGGAGAATATTTATTTTGTCATTTATGTCTTGATGAGCACATTCTATTTCT ACATCACACTACTTCTTGTTCCCGTTGCTGCACTTTTCTGTGACTTCGTTTACCAGGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAAATTATTCA AGAAATGCATAGACATGAGGTTGATAGATCGGAAAGGGAACAACTGGTGGAGATCGGGGGCCAGCTTTCGCCAGCAGAGGCAAGGAGTTACGCCATATCA AAACTCCCACGTGAGATATCAAAGCACACTGGATTTGCTTTTGACTCACCTGGGTACGAGTCCTTTTTCGCAGCACAACTTGGGATGTATGCACCACCAA AGGCATGGGATGTTGCTAGACGTGCTAGCGTGAAATTGCGGAAGAAGACCGGGCAGCAAAGTAAGTAATTTGGAGTAGGATGGATGCTTTGTACATTAGT TTGGTTTTCCATTGAGAGGCAGCCATAGGAATTCTGTAAAATTAGAATGTGCCATATTGAATGTTTGGGTCATTTTCATTTAGAGTATAATGTCTTGTGT TTTTTCTTTTGGTGGAACTAGTGCAGGTTTTTCACAGATTGTACATTGTACGATATTTAGTTATTCATATAGTCCTTTATTTTCAAATGTAAGGGTTGTG ATTTTCTTTAGCTGATTGAAATTGAAATGTATTGGATTTTTTTGAAAAGTTTCCCAAAAAAGTGCTTAATTTTCTGAGAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_186605;
• Additional information: details;

Expression of Ll_transcript_410220

FPKM

• PAB: 2
• PNAB: 14.2
• PS1: 16.7
• PS2: 8.9
• PS3: 11.9
• PW1: 13.8
• PW2: 16.9
• PW3: 10.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410220

• Blastp: Phospholipid-transporting ATPase 3 from Arabidopsis with 77.83% of identity
• Blastx: Phospholipid-transporting ATPase 3 from Arabidopsis with 78.36% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT1G59820)
• CantataDB: Link to cantataDB annotations (CNT0000373)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431014.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;