Id Trinity | TRINITY_DN51648_c5_g1_i12 |
---|---|
Name Transcript | Ll_transcript_410263 |
Sequence | AGAAAATGGGAAGTTGAATCTCTCTGGTTTGAGAGAAGTAGCGTTGGTTTTGATTGAGAGAAAGAGAAAGAGAAAGAGAAAGAATCGCATGAACTTGGAA AGATGAACGGTTGGGATGGAATCGAATCTGAAGCTTCATCTCTCGCTTCTCGATCCACTTCTACTCAACCTGTTCGACTCGGCCGAGTTCAACCTCAGCC TCCAACTCATCGCACCATTTTCTCCAATCATCGCGATGCCAATCTCCACGTCCGCTTCAAGGGGAATTCAATATCAACTACAAAGTTCAACTTTTTCACT TTTTTGCCAAAAGGATTGTTCGAACAGTTCAGACGGGTGGCCAATCTCTACTTTCTTACAATCTCAATATTGTCAACCACACCAATTAGTCCCGTGTCTC CAATAACTAATGTGCTTCCACTATCTCTTGTGCTTCTTGTCTCTCTTATCAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCCATAAA CAATAATACAATAGATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCATGGAAAAAATTGCAGGTTGGAGACATAATCAAGGTTAAGCAGGATGGATTC TTTCCTGCAGATCTGCTTTTCTTGGCTAGTACAAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGA AAGCATTGGAAAAGACTTGGGATTACCTGACACCAGAGAAGGCATCCGAATTCAAAGGTGAAATTGAATGTGAACAGCCAAACAACTCATTGTATACCTT CACTGGGAATCTTATACTTGAAAAGCAAACACTACCTCTCAGTCCAAACCAAATTTTGTTACGAGGGTGCAGTCTCAGGAATACAGAGTATGTTGTTGGG GTTGTTATTTTTACTGGACATGAAACTAAGGTGATGATGAATACAATGAATGTCCCTTCCAAACGAAGTACATTGGAGAGGAAGCTTGACAAGCTAATAC TCGCTCTATTTGCTACTCTCTTTATGATGTGTTTTATTGGAGCCATAGGCAGTGCTATCTTCGTGAACAAAAAGTATTTCTACTTACACCTTGATTCATC AGAGGAAGGCTCAGCGCAGTTCAACCCAAGAAATAGATTTGTTGTTTTTATTCTGACTATGTTTACCCTTATCACACTGTACTCCACAATTATCCCCATT TCACTATATGTGTCTATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCAT TGGCCAGAACATCAAATTTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTTTTCAA GTGTTCCATTGGAGGGGAGATCTATGGTAATGGTGTGACTGAAACTGAGAGGGGAATAGCAGAGCGCAATGGCATTAAAATTGAGGAAAATAAATCACCC AATGTAGTGCAAGAAAAGGGTTTTAATTTTGATGATGATAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATTTCTGCAAGGAATTTTTCA GATGCCTTGCTATATGCCATACTGTACTTCCGGAGGGTGAGGAGTCCGCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTTAT TGCTGCGAAGCACTTTGGTTTCTTCTTTTACAGGCGAACACCTACAATGATATATGTTCGAGAATCTCATGTTGAGAAGATGGGCAACGTTCAAGATGTG TCTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTAATATGTCGTTATCCAGATGGCAGACTTATGCTATACTGTAAGG GTGCTGATAATGTAATCTATGAGAGACTGGCTGATGGTAATAATGATATCAAAAAAGTGACTAGGGAACATTTAGAACAATTTGGATCTGCTGGACTACG CACATTATGTCTGGCCTACAAAGAAGTGCATCCTGGTGTTTATGAAAGCTGGAATGAGAAGTTTATTCAGGCCAAGTCTTCTCTACGTGATCGGGAAAAG AAGTTAGACGAGGTGGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAG AGACTCTTCAGAGAGCTGGTATTAAAATTTGGGTTCTTACTGGGGATAAGATTGAAACAGCAATAAACATAGCCTATGCATGCAGTTTAATAAACAATGG GATGAGACAATTTATTATCAGTTCAGAAACTGATGCAATTAGAGAAATGGAGGAGAAAGGTGACCAAGTAGAAACTGCACGATTTATTAAGGAAGAAGTT AAGAATCAGTTGAAGAAGTGCCTTGAGGAAGCGCAGAGCCATCTTCGCTCCTTGTCTGGACCTAAATTAGCACTTATCATCGATGGAAAATGTCTAATGT ATGCATTGGATCCAAGTTTAAGAGTGATGTTGTTGAATTTAAGTTTGAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCACAGGT TACAAGTATGGTCAAGAAAGGTGCGCATAAAATAACACTAAGTATTGGTGACGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGC ATAAGTGGGATGGAGGGGATGCAAGCTGTGATGGCTAGTGATTTTTCAATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGT CGTACCTTCGAATATGCAAGGTCGTCATATACTTCTTTTACAAGAATCTTACGTTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGG TCAGCGATTCTATGACGATTGGTTTCAGTCACTATATAATGTCATCTTCACTGCACTCCCTGTGATCATAGTTGGACTATTTGACAAGGTAATATTTTCT CCAACAATTTGGGACTGTAGTTTCTTTTGGGTAGGCGTGTTTCATCCATGGGAGCATATACCATTTGCTTATATAATTGGCTTGTGCTTCATTAATTACA ATACATATGTTCTTTAATG BLAST |
Tissue | pods |
Gene name | LI_gene_186605; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410263
Blastp | Phospholipid-transporting ATPase 3 from Arabidopsis with 79.62% of identity |
---|---|
Blastx | Phospholipid-transporting ATPase 3 from Arabidopsis with 80.32% of identity |
Eggnog | Phospholipid-transporting atpase(ENOG410XPYK) |
Kegg | Link to kegg annotations (AT1G59820) |
CantataDB | Link to cantataDB annotations (CNT0000373) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431014.1) |
Pfam | Phospholipid-translocating ATPase N-terminal (PF16209.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |