| Id Trinity | TRINITY_DN51649_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_410140 |
| Sequence | AAAAAAACTTGAGTCAATAGACATTTTTTGTGGTGATTATGATATGTTATCGGCTCTTAAATCAAATTGTTGTTTTTATGTACACTGAAAATAGAAAACA AACGAAGATAGAAAACGGAACATCGAACCCAATCTCGCCGGAAAATCAAATCCACCGCCCAATCTCGCCGGAAAATCAAATCCACCGTCCAATCTCACGA ACATTCTAGAATCCTTCATCATTTCCCTTCCCTCTTCCACGAATCAGATCCCTAATCACCTTGTTGATTTTGTTATTCTGTTTCTGCGATCTCACAACGC GATGGATCAGTTCGATGCGTTTTTCAGAAGAGCAGATTTAGACGGAGATGGTAGAATCAGTGGCGCTGAAGCTGTTTCTTTCTTTCAAGGATCCAATTTG CCTAAACACGTTCTTGCTCAGATATGGATGCATGCTGATAATGCCAAAACTGGTTTCCTTGGTCGGAATGAGTTTTATAATGCTCTTAGGTTAGTAACTG TTGCTCAGAGTAAGCGAGATTTGACGCCGGATATTGTCAAGGCAGCGTTATATGGTCCGGCTGCTGCTAAAATCCCTCCACCACAGATCAATCTTGCCGC TATACCTCCGCTTCAAGGGAATCGGCCAGGGACCGCTCCTGCTCCTGTTTCGCAGATGGGTTTAAGTAATGCACCTATGCAGTCTCAGATTTTTCCGTAT AGAGGACAGCAAGGGTTATCAGGTCCTGTTCCAAACCCACAGTATTTTCCTTCGCAGCAGAGTACCGGCATGAGACCCCCTCAACAATCGATGCCTACAC CTCAGCCCATGCCTACTAGTAGCGCTCCCCGTCCACAACAGACTTTCGCAAATCCTGGATTTTCAAGTGATTGGTATAGTGGAAGGCCCGGTATGGTTGC TACTAGACCTGGTATGGTTGCTACCAGGCCTGGAGGAATCGCCCCATCGAGTCCCTTGTCAACATCAACAGCACTGTCTCCAGTCTCACCAATGTCACAG TCAACAACTGTTAACACTAAAGCATTAGCTGTTTCTGGAAATGTGCTCTCCCCCAATTCTGCTTTGGGCAATGATTTTTTCTCTGCTGCCTCTTCCAGAC CAACAAAAGAACCTGCTGGACAGAATTTTTCTTTTAGCGTTGGTCCTCCCTCATCAGCCATTGTTCCAGTTTCCAGTGTTGCTCGACCTAAGCAAAATCC GCTCGATTCATTGCAGAGTTCATTCTCGATGCAGACTGTAAATAGTCAGTTTCAGCAGACACAGCCTGCCACAAACAGAAGCAACACAAGCCAACAGATT TCCCCACCAGCTTCTTCTCCACATGCATCTTCTGGGATAGCTGTTGGACTTGGGAATACTAATTCTGACAATTCACAGCTTTCTTGGCCAAAAATGAAAC CTACTGATGTGCAGAAGTACACAAAGGTGTTCATCGAAGTTGACACTGACAAGGACGGAAGAATCACTGGGGAGCAGGCACGCAGTCTATTTTTAAGTTG GAGATTACCAATAGATGTCTTAAAGAAGGTGTGGGACTTATCAGATCAGGATAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTTTATTTA ATGGAGCGGTACAGGGAAGGTCGACCTCTTCCACAATCTCTTCCAAGTAATGTTTTATTTGATGAGACACTGCTGTCTATGATCGGCCATCCCAAACCTA CTTATGGAAATGCAGCCTTGGGTGTGGGCCCAGGTTTTCAGTCGCAACAAGGGATGCCAGGTGCTCGGCCAGTGGCACCGGCAGCTGGTCTGAGGCCCCC AGTGCAAGGAATTTCTCCCCCAGCCCCTGGAACTATGCAGCCTAATCAGCAGAAGTCAGGTGCACCAGTTCTGGAGGATTCCTTTTTGAATCCCACAGAT AATGGTGATAAGGATATATTAAACTCAAACTCTCAAGAAGCAGCAACAGCTGGGAAAAAGGTTAAAGAAACAGAGAATGTGATTCTGGATTCAAGAGAGA AGATTGTATTCTACCGCGACAAAATGCAGGAACTGGTTCTATATAAAAGCAGGTGTGATAATCGACTGAATGAGATTACAGAAAGGGCATCTGCAGATAA GCGGGAGGCAGAGACATTGGGCAAAAAATATGAAGAGAAATACAAACAAGTAGCAGAAATAGCATCCAAATTGACCGTAGAAGAAGCTAAATTTCGTGAC ATACAGGAAAGGAAATCGGAGTTGCAGCAAGCCATTGTCAAAATGGTACAAGGAGGCAGTGCTGATGGTATACTTCAGGTCCGTGCTGAACGCATACAGT CAGATCTTGATGGTTTATTTAATGCTCTAGCTGAACGATGCAAGAAGCATGGGATAGATGTGAAGTCAATTACAATGGTTCAGCTTCCTGCTGGTAATTT TATTCTCATGCCATCTCATGGTTTTTTCCTCAATCACTTAACTCTGTTCTTTATTGATTCTCAAGAACCAATACTTATTATTAGTCTTGCAATACATGAT TCTTCTTATTGTTTCTTATGTAATGATATCAACTCATAGAGGCATCATCTTACATTTTAGAAACCTACATTCCCTTACAAATATTATTTTAAATACAGGG GATTGCATATCAACTGACTGATAAATTGCATTTTATTTCTTCTCTATTTGCTTTATGCAACTATATGTATCGCTATTTGATTAAGCCACTTTCCTTGTAT GGGGATTTGGTACTGGATATTTTTTAACATTTAATTATTTTAGAAAAACATGTTGAGAAAAGTGATGTTCTGTTATGTTGAACTCTCTTTCTCTGGGCTC TGGGAAGTGGATAAGGGCTAGAATGAGTAGCTAAAGCCTAAAGTCATAGATGAATGAACCTTTTATGCAGCAGATTGTTACAAGTGAATGCAATTTTCCC TGTTTCTAACTTTAATTTGATTGTTAATGTGTATGAACCTAATGGATCATAAGGTTGGCAACCTGGAATTGCGGAGGATGCAGCTCTTTGGGATGAAGAT TGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACGTTTGATATGAAAAATGCATCTTCTAAACCAAAACCTGCAATCATTCATGGAGATCAAA GTTTCCCTGATGACTATTCAGTTGGTTCGCCTGTGAACGCAAACGGAAAGCATGAAAATTCTACCAATGGTGATTATACATTTGAGGATGAATCTTCTTA TGCACACAGTGAAGATGAGTTGGGAAGAAGCCCCCGTGATAGTCCAGCTGGAAAGACTGCTGTAGAGAGTCCTCAAGGATTTTCAAATGCTCATTTTAAA GAAAGTATTGAAGCAGATGCAGAAACAAATAGGTAAAAAAATTCCATCTCTCTCTTGATGTTTGGGGTGTGAAACTTTGTAAGTGGTCGATATATGTGTG TTCCCATTCTTTGTGGTTTTATCTTTCTTCCGACCTTGCATCGCTTTGACTGTAGTGCATTTAGTAATTTGATGTTATTAATTAATGGTAACAGAAGCTT TGATGAATCAACCTGGGGTGCATTTGACAACAACGATGATGTGGATTCGGTGTGGGGTTTTAACCCTACCAAGGACTCTGACTTGGACCACCAGAGAGAT TTCTTTACATCTGGTGATGATTTTGGTATAAACCCAATTAGAACAGGATCTACACATACAGATGGCACCTTCCAGACTAAGAGCCCATTTACTTTTGATG ATTCAGTGCCTGCAACTCCAGCTTCCAAGTTTGGTAACTCTCCAAGGTACAGTGAGGCAGGGGATTTCTTTGACATGTCGTCAAGGTTTGATTCCTTCAG CATGCATGAAAGTGGATATTCTCCCAAAGCAGAACCAAGGTTTACGAGATTTGACTCCATCAGCAGCAGCAAGGATTTCGGCTACAATCCTGCGAGTCTC TCAAGGTTTGATTCCATAAGTAGCAGCAAAGATTTTGGCTACAATCCTGGGACTTTCTCAAGGTTTGATTCAATCAGTAGCAGCAAAGATTTGGGCTTCG GTCGTGAGGCGGGGCATGCCAGGTTTGACTCGATTAGTAGCACTAAAGACTTCGGTCGTGAGGCGGGGCATACCAGGTTTGACTCGATTAGTAGCACTAA AGACTTCGGTCACAGTGATGCATTCTCTTTTGATGATACTGATCCATTCGGCTCCTCTGCCCCATTTAAGGTCTCTTCCGAGAGTCATTCTCCGAAGAAA AACTCTGATGGTTGGAGTGCTTTCTAGAGTGCATCATAACTTTCTCCTGTATCTTTGTTTCCATTTCCTTGATTGTTCACGGTAGCCAATTTTTTGTATA GCTAGAAAAAAGCTGAACTGCATATGTTATGTGAAGTTGATGTATTAGTTCAAAGACAAGCTTTTGATTTTTTGAATAGCTTTTTTTGAGAGGAGAGGTC TATTGAGATGAGTGCTTTTGAGAGTTACAGCAATGAAATTAAATGACTTGGTGTGTATTTAATATTGTAAGTTGAATGGCAATCTCGTGCGAAGTCTTTA TTACAAGAGCATTTGTCAATATTATTCGGGTCCCGATAGTAAGTCTAAAAGACTCACTCTTCATCTTAGCCATCATTTTATTGGAAATTCAGTGGTTTAG GC BLAST |
| Tissue | pods |
| Gene name | LI_gene_186615; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410140
| Blastp | Uncharacterized calcium-binding protein C800.10c from Schizosaccharomyces with 40.48% of identity |
|---|---|
| Blastx | Uncharacterized calcium-binding protein C800.10c from Schizosaccharomyces with 32.89% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBC800.10c) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438102.1) |
| Pfam | EF hand (PF13202.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |