| Id Trinity | TRINITY_DN51651_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_409140 |
| Sequence | GTTTGATATAGTCTGTAAAACGAACGGTGGTTGATGGGCCTACCCACGTAGGTGGAATATAGAAGAAGCAGAAGCGATTTGACGAAAATAGAATTACGAA ACTGTCCTTATCCCTCTTCAACAAATACACATTCCTCTGTGACTCATTCGCATCTTCGTCTTCTTCATCTCAAATTTTCGCCAGATGGGAGTTAACCAAC ATGAAGGACTTTCTGAAGACAACGAGCCTGCTGGAGATGCCTGTGCCAGCAGTTGTTTGAACCAGCAGGGTCCTGCGAGTCTCTCCGATGTTAGCAATCC AAGTGCAAATACTGAAAGCAGTGAAGTTAATGAACCTGGTGGTGTTTCTTGTAAGAAAATTAATACACCACATTTCTATAGACAAGATGTTGTGAGGAAT ACTACCAGTGGCTTGATTGGGATTGTGACAGAGGTTGCCGGTGATTCAGATTCGGATTCGGACAGCAGCATTACTGATGATGAGGACGATAGTGAAGATG AGGATGCAGACCGCGAGGAAGAGAATGTTGATGACAGTAACAATGCTAGTAGAAATTCTGATAAGAAGGGTGCTGAAATTGCTGATGGGGATCATAAATC TGATGCTCTTCTAGCTGACCAGATGCGTGTACTCTGGATTAACGAATCTGAGTCCACTCAAAATTTCAATGATGTAGAAGTTGTTGATCGGGGATTTTTA CACGGGGATTTTGTTGCTGCTGCTGCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTGAATATGTCTGTGGACCTGTTGGCCTCTGATGGATCTA TAATAAAAGATATCTCATCAAAAAACTTACAACGTATTAGGGATTTCACTGTTGGTGATTATGTCGTGCTTGGGTCTTGGCTAGGAAGAGTTGATGATGT TTTAGATAATGTGACTGTCTTATTTGATGACGGTTCAGTGTGTAAAGTCACCAAAGCAGATCCATTGAATCTTAAACCTGTATCTAAGAATATCCTTGAA GATGGGCATTTCCCTTATTACCCAGGGCAACGTGTAAGGGCTAGCTCTTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCCAGTA GGCTGGAAGGTACTGTCACTAAGGTTACAGTAGGATCAGTGTTTGTTTATTGGATATCATCTGCAGGTTATGGGCCATATTCTTCTAGTTCCCCAGCTGA AGAGCAGAGCCCAAAAAACTTAAAATTATTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACCCTCATCGGCACTATCATCC TCAATTTCCATGGACAAAGGCATATCAAAATTAGAACTTAACAATTCTGTTAACAACGAAAAAGACTCTAATCATACAGGAAGTGGGTGTGATTCAGAAG AAGTTACAGCTGAAGAATTAAACGGGAATAAGGATCCTATGGACCTTGATCCAGTGGATGCTTTAGATGGAAATGATGGAAATATTATAAGTAATCCTTC ACGTGATTCAAGCTCATGTGGTAGTTCTTCTATGTCAGTATCGAAGGACCCTGTCCATGAAACCTGGCCTATTCACCGCAAGAAAATAAGGAAAGTTGTA GTCAGGAAAGAAAAAAAGGTCCGGAAGAAGGAGGAAAGTTTTGAGAAAGCTGTTTTGATTGTCAACACAAGGACAAAAGTTGATGTTGCATGGCAGGATG GAGTAATAGAGCGCAAACGGGATTCTACAAGTTTGATTCCTATAGATAATCTTGGTGATCATGAATTTGTCGCAGAACAATATGTGGTAGAGAAGACCTC TGACGATGGTGTGGATATTTGTGAAACTAGGCGTGTTGGGGTGTTGAGGAGTGTTAATGCCAAGGAGCGGACAGCTTGTGTGAAGTGGTTAAAACCAGTT GACCGACCAGAAGATCCTCGAGAGTTCGACAAGGAGGAAGTTGTAAGCGTATATGAGCTGGAAGGACATCCAGATTATGATTACTGCTATGGGGATGTTG TTGTTCGGCTATCGCCTGTGTCTGTCTGTTTAGAAACAGCTTCTGTTGGAGAGTCCACTGAGCAATCAAAGCAGAAAAATGAAGATTGTGGGATTAAAAA AGAAACAAAAAGCCGAACAGGTACCAGTAAAGGAGAAAATGCATCTGCTGGTGAAACTTGTGAGGAGTTCTCAGACCTCTCTTGGGTAGGAAATATAACT GGTCTTATTAATGGTGATATTGAAGTTACATGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTTGTTGGTCGAGATGATGATGATG AATCAATTGCTGCTGGAAGTGATATAAGTGATGCTGCAAGCTGGGAAACTGTTAACGATGATGAAATGGAAGTCCTTGAGGAATCCAAAGAGGATAATGA TGTGCAGAATATTGAGAGGGAAAATTCAAGCAGTGTTACTTCTGAGACAGAAGAGAGTGGAGAGAATGACTCTGTTAGGGCTGCGGCACTTTCTGTTCCC CTAGCAGCATTTCGTTTCGTCACCAGACTTGCCAGTGGAATATTCTCAAGGGGCCAAAGAAACTTAGATCTTGTTGACTTGCAGCCAAAAGATGAAAGTG AACATCCATCATTTGATGAGTCTAGTTCTCAGAAATCTATTGCCATTGATGGTGAAAGTTCAGGCAATATGAGTGGAAGAAATGAGGAAGTCATTCCAGA GACATCTGAAATTTTGGACGCATGTGAGGCATTGTGTAGCTTGAGGAATGAAGATGCTCCAGCAAGTTACGACGATGATGCTTGCAGTTTCAAACACTTT GATATAACTAAAGATCCTTCAGACCATTATTTTACTGGTTCAAACGGACAGGTACTGCTCCTGCCTTATTGCTAATATCTCAAGAAACAATAGAATGTAG AAGTAGGGAAAATGAAAGAATGAATAGATACTTCCTTTTTTTATTGAATAGTATTTCGTCCTCTGATTATCATTGAGCAAGACATATGTGCATGATGTAC TTGGCCTAGTTTTGACAAAAGTGATCTATGCATATTAGTATTCATGTATGTTAGTTTCCTTTCAGTTTAGCTATACCGAAAACAACAGTACTGATCATGT TGGAGCATCAAAGATGTGACTGGTTCATGAATTCATTCAAATGTTTTCTTAATTTTGAATGTAATTTCCTTTATCATACTGAAATTAATATATGATTTTC TATCCACTTTCAGAGTAACAACCGAAAATGGTTTAAGAAGGTGCAACAAGATTGGACCATATTGCAGAACAACCTTCCTGAGGAAATTTATGTACGAGTT TATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTTGGGCCATATGGAACCCCTTACCAAGATGGACTTTTTTTCTTTGATTTTCACCTTCCACCAG AGTACCCAGACGTTCCACCGGTAAGGAATGTTATTTTGAAGTTGTTCTACTGTCACTTATTATTCCCCAACCAAGAAAATGAATCAGATAGATAATTAAA TATAAATTACGCATTCAATTTGTATAAATTTACTCCAAATGATTATATATCATCCATGTGTTCTTTATGTTGGTCTCAAATTTTGTAGTCGGCTTACTAT CACTCTGGTGGTTGGCGTGTTAACCCTAATTTATATGAGGAAGGGAAGGTGTGCCTTAGCCTTCTAAATACATGGACAGGTAGAGGAAATGAAGTATGGG ATCCAAAATCTTCTAGCATCCTTCAAGTCCTAGTTTCGCTGCAAGGCTTAGTGCTCAACTCTAAGCCATACTTCAATGAAGCTGGTTACGATAAGCAGGT TGGAACAGCTGAAGGAGAGAAGAATTCATTGTCATACAATGAGAATACATTTCTACTTAACTGCAAGACTATGATGTATCTCATCAGGAAACCCCCAAAG GTGATTATGAATAAAAGTTGTAACACTTTTCCTATTTTATATGATTAGTTAAATAAATATCATATTATGCTTGCTCAGCTCTAATAAGACTCAATATGTA TAGCTCATCTGCTCATGTATCATAGAAAATTGAATATCCAAAAGACAAGAGGTAGGAGACTTTTTTGGGTAAACTTTGTGCTGATGGTAATTGATATGCA TGCAAAATGACACCCTACCTTGGTAAGGTCATACTCAGTTCTTGGTGGTAGTCTCTAATTGTTATTTATTATGTAATAATTTAATGTCACATATTTTCTT TAGAGGACATAGGACAAAAATGGTGACATGGTACATGAGGCTCTCACCTAGTGGGTTTTGAGAGGGTAAATTTACGCAAATTTACCCCACAAAGTATTAA AAGTTAATTGTTCCAGATTACCTAAAATGATAATTTAAAGTATATGAAATTGTTCCATTAATTGCATAGCTCGAGTTGATTTTATTTTTTGCAATAGGTG TGGAGGAAGCCTCTATAGCTTCTCTAGTCTCTACCATACTATATTTGCATTCTATTGTCAAGATTCGTGTTTAATGATATGAATATTATTGTGCATGATA ACATTTGACTGTTAATTTGTTTATGAATGCTCTAGGACTTTGAAGTGCTGGTCAAAGAACATTTTAAGGGGCGTGGCCATAACATCCTAAAGGCTTGTGA TGCATATATGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186621; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409140
| Blastp | Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 55.44% of identity |
|---|---|
| Blastx | Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 55.44% of identity |
| Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
| Kegg | Link to kegg annotations (AT2G16920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452616.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |