Id Trinity | TRINITY_DN51651_c0_g1_i7 |
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Name Transcript | Ll_transcript_409146 |
Sequence | CAATTTGGGAAGCAAATTACGGAACTGCCCCTAAGCCTCTGTAACAAATACTGAGTCATTTGCTCATTCGTCTTCTTCTTCTGGAACCCAAACATTCTTC ATTCTCGCGAGATGGGAGTTCAACTTCAACAACATGATGGACTTTCTGAAGACGATGAGCCTGCTGGAGATGCTTGTGCCAGTAGTTCTTTAAACCAGCA GGGTCCTGTGAGTGTCTCTGATGTTACCAATCCAAGTGCAGATACTGAAAGCGGTGCAGCTAATGAATCTGGCGGTGTTTCTTGTAAGAAAAGTAATACA CCACATTTCTACAGACAAGATGTTGTGAGGAATACTACCAGTGGCTTGATTGGGATTGTGACAGAGGTTGCTGGTGATTCGGATTCAGATAGCAGCATTA CTGATGATGAGGATGATAGTGAAGATGAGGATGCTGATTCCGAGGAAGAAAATGGTGATGACAGTAACAATGCTAGTAGAAATTGTGATCAGAATAGTGC TGATGGGGATTTCAAAACTGGTGCTCTTCTGGCTGACCAAATGCGTGTACTCTGGATTAACGAATCTGAATCCACCCAAAATTTCAACGACGTAGAAGTT GTTGATCGGGGATTTTTACACGGGGATTTTGTTGCTGCAGCTTCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTAAATATATCTGTGGATCTGT TGGCTCCTGGTGGATCTATAATAAAAGATATCTCATCAAAAAGCTTAAAGCGTATTAGGGATTTCACAATTGGTGATTATGTTGTGCTTGGGCCATGGTT AGGCAGAGTTGACGATGTTTTAGATAATGTGACTGTCTTATTTGATGATGGTTCAGTGTGTAAACTCACCAAAGCAGATCCATTGGATCTTCAACCTGTT TCTAAGAATATCCTTGAAGATGGGCATTTCCCTTATTACCCAGGGCAACGTGTAAGGGCTACCTCGTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTG GCTTGTGGAAAGCTAATAGGTTGGAAGGTACTGTCACTAATGTTACAGTAGGATCAGTGTTTGTTCGTTGGATATCATCTGCAGGTTATGGGCCCTATTC TTCTAGTTCTCCAGCTGAAGAGCAGAGCCCAAAAAACTTAAAATTATTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACCC TCATCGGCACTATCATCCTCAATTTCCATGGACAAAGGCATATCAAAATTAGAACTTAACAATTCTGTTAACAACGAAAAAGACTCTAATCATACAGGAA GTGGGTGTGATTCAGAAGAAGTTACAGCTGAAGAATTAAACGGGAATAAGGATCCTATGGACCTTGATCCAGTGGATGCTTTAGATGGAAATGATGGAAA TATTATAAGTAATCCTTCACGTGATTCAAGCTCATGTGGTAGTTCTTCTATGTCAGTATCGAAGGACCCTGTCCATGAAACCTGGCCTATTCACCGCAAG AAAATAAGGAAAGTTGTAGTCAGGAAAGAAAAAAAGGTCCGGAAGAAGGAGGAAAGTTTTGAGAAAGCTGTTTTGATTGTCAACACAAGGACAAAAGTTG ATGTTGCATGGCAGGATGGAGTAATAGAGCGCAAACGGGATTCTACAAGTTTGATTCCTATAGATAATCTTGGTGATCATGAATTTGTCGCAGAACAATA TGTGGTAGAGAAGACCTCTGACGATGGTGTGGATATTTGTGAAACTAGGCGTGTTGGGGTGTTGAGGAGTGTTAATGCCAAGGAGCGGACAGCTTGTGTG AAGTGGTTAAAACCAGTTGACCGACCAGAAGATCCTCGAGAGTTCGACAAGGAGGAAGTTGTAAGCGTATATGAGCTGGAAGGACATCCAGATTATGATT ACTGCTATGGGGATGTTGTTGTTCGGCTATCGCCTGTGTCTGTCTGTTTAGAAACAGCTTCTGTTGGAGAGTCCACTGAGCAATCAAAGCAGAAAAATGA AGATTGTGGGATTAAAAAAGAAACAAAAAGCCGAACAGGTACCAGTAAAGGAGAAAATGCATCTGCTGGTGAAACTTGTGAGGAGTTCTCAGACCTCTCT TGGGTAGGAAATATAACTGGTCTTATTAATGGTGATATTGAAGTTACATGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTTGTTG GTCGAGATGATGATGATGAATCAATTGCTGCTGGAAGTGATATAAGTGATGCTGCAAGCTGGGAAACTGTTAACGATGATGAAATGGAAGTCCTTGAGGA ATCCAAAGAGGATAATGATGTGCAGAATATTGAGAGGGAAAATTCAAGCAGTGTTACTTCTGAGACAGAAGAGAGTGGAGAGAATGACTCTGTTAGGGCT GCGGCACTTTCTGTTCCCCTAGCAGCATTTCGTTTCGTCACCAGACTTGCCAGTGGAATATTCTCAAGGGGCCAAAGAAACTTAGATCTTGTTGACTTGC AGCCAAAAGATGAAAGTGAACATCCATCATTTGATGAGTCTAGTTCTCAGAAATCTATTGCCATTGATGGTGAAAGTTCAGGCAATATGAGTGGAAGAAA TGAGGAAGTCATTCCAGAGACATCTGAAATTTTGGACGCATGTGAGGCATTGTGTAGCTTGAGGAATGAAGATGCTCCAGCAAGTTACGACGATGATGCT TGCAGTTTCAAACACTTTGATATAACTAAAGATCCTTCAGACCATTATTTTACTGGTTCAAACGGACAGAGTAACAACCGAAAATGGTTTAAGAAGGTGC AACAAGATTGGACCATATTGCAGAACAACCTTCCTGAGGAAATTTATGTACGAGTTTATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTTGGGCC ATATGGAACCCCTTACCAAGATGGACTTTTTTTCTTTGATTTTCACCTTCCACCAGAGTACCCAGACGTTCCACCGTCGGCTTACTATCACTCTGGTGGT TGGCGTGTTAACCCTAATTTATATGAGGAAGGGAAGGTGTGCCTTAGCCTTCTAAATACATGGACAGGTAGAGGAAATGAAGTATGGGATCCAAAATCTT CTAGCATCCTTCAAGTCCTAGTTTCGCTGCAAGGCTTAGTGCTCAACTCTAAGCCATACTTCAATGAAGCTGGTTACGATAAGCAGGTTGGAACAGCTGA AGGAGAGAAGAATTCATTGTCATACAATGAGAATACATTTCTACTTAACTGCAAGACTATGATGTATCTCATCAGGAAACCCCCAAAGGTGATTATGAAT AAAAGTTGTAACACTTTTCCTATTTTATATGATTAGTTAAATAAATATCATATTATGCTTGCTCAGCTCTAATAAGACTCAATATGTATAGCTCATCTGC TCATGTATCATAGAAAATTGAATATCCAAAAGACAAGAGGTAGGAGACTTTTTTGGGTAAACTTTGTGCTGATGGTAATTGATATGCATGCAAAATGACA CCCTACCTTGGTAAGGTCATACTCAGTTCTTGGTGGTAGTCTCTAATTGTTATTTATTATGTAATAATTTAATGTCACATATTTTCTTTAGAGGACATAG GACAAAAATGGTGACATGGTACATGAGGCTCTCACCTAGTGGGTTTTGAGAGGGTAAATTTACGCAAATTTACCCCACAAAGTATTAAAAGTTAATTGTT CCAGATTACCTAAAATGATAATTTAAAGTATATGAAATTGTTCCATTAATTGCATAGCTCGAGTTGATTTTATTTTTTGCAATAGGTGTGGAGGAAGCCT CTATAGCTTCTCTAGTCTCTACCATACTATATTTGCATTCTATTGTCAAGATTCGTGTTTAATGATATGAATATTATTGTGCATGATAACATTTGACTGT TAATTTGTTTATGAATGCTCTAGGACTTTGAAGTGCTGGTCAAAGAACATTTTAAGGGGCGTGGCCATAACATCCTAAAGGCTTGTGATGCATATATGAA BLAST |
Tissue | pods |
Gene name | LI_gene_186621; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409146
Blastp | Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 59.81% of identity |
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Blastx | Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 59.9% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
Kegg | Link to kegg annotations (AT2G16920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452616.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |