Ll_transcript_409149

• Id Trinity: TRINITY_DN51651_c0_g1_i9
• Name Transcript: Ll_transcript_409149
• Sequence: CAATTTGGGAAGCAAATTACGGAACTGCCCCTAAGCCTCTGTAACAAATACTGAGTCATTTGCTCATTCGTCTTCTTCTTCTGGAACCCAAACATTCTTC ATTCTCGCGAGATGGGAGTTCAACTTCAACAACATGATGGACTTTCTGAAGACGATGAGCCTGCTGGAGATGCTTGTGCCAGTAGTTCTTTAAACCAGCA GGGTCCTGTGAGTGTCTCTGATGTTACCAATCCAAGTGCAGATACTGAAAGCGGTGCAGCTAATGAATCTGGCGGTGTTTCTTGTAAGAAAAGTAATACA CCACATTTCTACAGACAAGATGTTGTGAGGAATACTACCAGTGGCTTGATTGGGATTGTGACAGAGGTTGCTGGTGATTCGGATTCAGATAGCAGCATTA CTGATGATGAGGATGATAGTGAAGATGAGGATGCTGATTCCGAGGAAGAAAATGGTGATGACAGTAACAATGCTAGTAGAAATTGTGATCAGAATAGTGC TGATGGGGATTTCAAAACTGGTGCTCTTCTGGCTGACCAAATGCGTGTACTCTGGATTAACGAATCTGAATCCACCCAAAATTTCAACGACGTAGAAGTT GTTGATCGGGGATTTTTACACGGGGATTTTGTTGCTGCAGCTTCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTAAATATATCTGTGGATCTGT TGGCTCCTGGTGGATCTATAATAAAAGATATCTCATCAAAAAGCTTAAAGCGTATTAGGGATTTCACAATTGGTGATTATGTTGTGCTTGGGCCATGGTT AGGCAGAGTTGACGATGTTTTAGATAATGTGACTGTCTTATTTGATGATGGTTCAGTGTGTAAACTCACCAAAGCAGATCCATTGGATCTTCAACCTGTT TCTAAGAATATCCTTGAAGATGGGCATTTCCCTTATTACCCAGGGCAACGTGTAAGGGCTACCTCGTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTG GCTTGTGGAAAGCTAATAGGTTGGAAGGTACTGTCACTAATGTTACAGTAGGATCAGTGTTTGTTCGTTGGATATCATCTGCAGGTTATGGGCCCTATTC TTCTAGTTCTCCAGCTGAAGAGCAGAGCCCAAAAAAACTTAAAATTATTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACC TTCATCAGCACTGTCATCATCAATTTCCATGGACAAAGGCATATCAAAATTAGAACTTAACGATTCTGTTAAGAATTTATTAGACTCTAATCAGAAAGGT AGTGTGTGTGATTCAGAAGAAGTTACAGTTGAAGAATTAAATGGGAATAAGGATCCTATGGACCTTGATCCAGTGGATGCTTTGGAAGGAAATGATGGAA ATGTTGGAAGTAATCCGTCACACAATTCTAGCTCATGTGGTAGTTCTTCTATCTCAGTATCGAAGGACCCAGTTCATGAAACTTGGCCTCTACACCGCAA GAAAATAAGGAAAGTTGTCATCAGGAAAGAAAGAAGGGCCCGAAAGAAGGAGGAAAATTTTGAGAAAGCTCTTTTGATTGTAAAAACGAGGACAAAAGTT GATGTTGCATGGCAGGATGGAGTACTAGAGCGTGAACGGGATTCAACAAGTTTGGTTCCTATAGATAATCTTGGTGATCATGAATTTGTTTCAGAACAAT ATGTGGTAGAGAAGACCTCTGATGATGGTCCGGATATTTGTGAAACTAGGCGTGTTGGGGTGGTGAGAAGTGTTAATGCCAAGGAGCGGACAGCTTGCGT GAGGTGGTTAAAACCAGTTGGTCGACCAGAAGATCCTCGAGAGTTCGACAAGGAGGAAGTTGTTAGCGTATATGAGCTGGAGGGACATCCAGATTATGAT TACTGCTATGGGGATGTAGTTGTTCGCTTGTCACCTGTGTCTGTCTGTTTGGAAACAACTTCTGTTGAAGAGTCCATAGAAAAATCAAAGCAGAAAAATG AAGAATGCAGGACTAAAAAGGAAACTAAAAGCCAAACAGGTACCAGTAAAGTAGAAAATGCATCCAGTGATGAAGCTTGTAAGGAGTACTCAGATCCCTA TTGGGTTGGAAATATAACTGGTCTTATCAATGGCGATATTGAGGTTACTTGGGCTGATGGAATGGTGTCAACGGTAGGACCCCAAGCAATCTATGTTGTT GGCCGAGATGATGATGAGTCAATTGCTGCTGGAAGTGAAATAAGTGATGCAGCAAGCTGGGAAACTGTTAATGATGATGAAATTGAAGTCCTTGAGGAAA CCCAAGAGGATATTTTGAGGGAAAATTCAAGCAGCATTACTTCTGCCTCAGAAGAGAGTGGAGAGAATGGCTTTGGTGGGTCTGCAGCATTTTCTGTTCC CCTAGCAGCTTTTCGTTTTGTCACCAGACTTGCCACTGGAATATTCTCAAGGGGCCAAAGAAACTTCGATCTTGTGCAGTTGCAGCCAAAAGATGAAAGT GAACTTCCATCGCGTGATGAGTCTAGTTCTCAGAAATTTGTTGCCACTGTTGGTGAAAATTCAGGCAATAAGAGTGGAAGAAATGAGGAAGTTGTTCCAG AGACATCAGAAAATTTGGAAGCATGTGAGGCATTGTGTACCTTGAGGAACAGAGATGCTCCAGCAAGTTACGATGATGGTGCTTGCAGTTTCAAACACTT TGATATAACTAAAGATCCTTTAGACCATTATTTTACTGGCACAAATGGACAGAGTAACGACAGAAAATGGTTTAAGAAGGTGCAACAAGATTGGACAATA TTGCAGAATAACCTTCCTGAGGAAATTTATGTACGAGTTTATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTTGGGCCATATGGAACCCCTTACC AAGATGGGCTTTTCTTCTTCGACTTTCACCTTCTGCCGGAGTACCCAGATGTTCCACCAGTAAGGAATCTTATTTTGAACTTGTTCTGCTGTCGAACTTA TCATGCCTCCAATATAAAGCCAAGGGAAGATGTTAATTATCAATTACCTACTCAGTTTGTATAAATTTAGTCCAATTGAATATATCTCATTTCCTTATCT TCTTTACGTGCCTCTCAAACTTTGCAGTCAGTTTATTATCATTCTGGTGGTTGGCGCATTAACCCTAACTTGTATGAGGAAGGAAAGGTGTGCCTTAGCC TTCTAAATACATGGACAGGCAGAGGAAATGAAGTATGGGATCCAAAATCTTCTAGCATCCTTCAAGTCCTAGTTTCACTGCAAGGCTTAGTGCTCAACTC CAAGCCTTACTTCAATGAAGCTGGTTATGATAAGCAGATTGGAACAGCTGAAGGAGAGAAGAATTCATTGTCATACAATGAGAATGCATTTCTGCTTAAC TGCAAGACTATGATGTATCTTATGAGGAAACCCCCCAAGGACTTTGAAGTGCTCATCAAAGAACATTTTAGGAGGCGTGGTCGTAATATCCTTAAGGCTT GTGATGCATATATGAAAGGTTATTTGATTGGCACGCTCACTAAAGATGCATCTGTAAGTGACAATAGCACTCAGAATTCTAATTCTGTGGGTTTCAAGTT GATGTTAGCGAAGATTGTGCAAAAGCTTTACTTGTCGTTGAACGAGCTCAGAGCTGATTGCGAGGAATTTAAACATCTACAAGGGTTGTAACATAAAGTT TGAAGTTATATACATCACTCCTCAAAGCCGGTAGCATCTGACGGCTCTTCCCAAATTCAAGATCATGAGGTACTGCGAGATGTAAAGACTCTAATATGTT GTAATGATTGAAAGACAACTACACTTCTCAGAGCTTGAAGGGAGCATAATTGATGGGACTAATGTTAAATTGATGGAAGCAACCACTACCATAGCAGGCT AGATGTTGGTCAATGTTGTTTACTAGTATTTGTTTACATTTTGTATGCATTTATGGAGGGGGTGGAGTGGGGTTGGATATTTTGTTCTTAGACATTTGAA AGCCACTTCCTTAGTTGCTTTTCCCACCCAGTTGGAAAAAGGTTTTGTGTGTTTTAGGTGTTTAAAAGCATTTGATTACCTCCACTTTTTCTGGAAAATG ATGAATTGGTTATAATTCAAGAATGGATATATTTCTCTGTTTTAAGCAGCATCATGGAATTTTTGTTGAGTGCTAACAGTTAGATCCAAC
• Tissue: pods
• Gene name: LI_gene_186621;
• Additional information: details;

Expression of Ll_transcript_409149

FPKM

• PAB: 1.1
• PNAB: 4.6
• PS1: 3.7
• PS2: 3.2
• PS3: 3.3
• PW1: 4.2
• PW2: 2.6
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409149

• Blastp: Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 50.55% of identity
• Blastx: Probable ubiquitin-conjugating enzyme E2 23 from Arabidopsis with 54.37% of identity
• Eggnog: ubiquitin-conjugating enzyme(ENOG410XQ7W)
• Kegg: Link to kegg annotations (AT2G16920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432466.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;