| Id Trinity | TRINITY_DN51652_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_409942 |
| Sequence | GTTATTATATTTTTAGGTTTTTTTCTTCAACAGAATAAATAGAAATGGCATAAAGGAAATAAACGAGTGAGTCAAACATCCACATTCATATTTGACTCGC TCCCATTATCAGCTGGCAAATGGAATCTCTTCTCATGGACCAAACCACACCTGACCGGATATTCCCGTCATCATCATCTCCATACTCACCAACCAACGGC TCTGATCTAGCGCGTGTCTTCACTCTCCATCTCCCTCATTGATTAAAAAAAATCAAACGAGTAAGAGAGAGAGAAAAAACAAAACAAAGGAAATAATTGA GACTGTTTCTCTTTCTAACATCACATGGCATCTATACCTTTGGGTCCGCACCACCACCACCAACCACCGCTGGCGCCACCGCAACAGCCCCAACCTGATG TTACTCGCCGGAGCTCTGACATGGACACCGATAAGGATATGTCAGCTTCTGTCATTGAAGGGAATGACGCAGTCACTGGCCACATAATCTCCACCACAAT TGGAGGCAAAAATGGTGAACCTAAACAGGTATGTTCATGTTTCTTACCCTTTTCCTTCTTAACTTTTAGTTTTTGGAAGAAATTCACTTTATATCCTCTT AAGGTGTCTGTAATAGTGTATAGTGATTATTGTTTAGTTAATGATTCACTTCCTTTTGGGGGTTAATTGGAACTACATTTCGGGGTTGGGAAATCAAATT AATAAAATTACTTTTATCTCCTTGCGGAGTTCTGCCCATGGCCTCTTATAGAGGGTTCTCTTAGTATTTTTTGCAAAGATGCTAGCATGCTTTATCGCAT GTGTTTGGTTCTTAGTTTTTCAGGGATCTCTTTGTATTTTTGGCTTAGTTTTCAGCTATAGTTTCTGAGGATTACTATTCTCTCCTCTCTCTCTCTCTAT ATATATATATATGTAACTATACATATATATATATATTACCTTTTATATTCATGGAATCATGGGTCTCCAGAAATTAAATATTTGTTGTCAATCAGTGGTT GGCTTGTTTTTCCATTGCCTAGCCCAGTCCAGTAGTTTTTCCACCAACTTAATTTTTCGGTCACAGATGTATAGTTTTGAAAAATATTGATTTGTTGCGA TGATTTTGTAATAACTTTTTCAATACTTGAAATTGGTATCTAGTCTATGAATTTCCCAAATATTTTATTATCTTTTACGATAACATCTCTGAGACTGCTC ACAGACCATCAGTTACATGGCAGAACGTGTCGTGGGCACCGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTAGCCATA AAGAAGGTTTTGCAGGACAGGCGGTACAAAAATCGTGAGCTTCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGATGCACTGTTTCTTCT CTACGACAAGTAAAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAGACGATGTACCGGGTTTTAAAGCACTACAATAATATGAACCAGAG AATGCCCCTCATCTATGTGAAACTATATACATATCAGGTATGAACTTTTCCCTGTTTTAAATTCAGTTTTGGTATGCTGTTCTGAGCTCTGTTGTCTTGA CGCCATATTATAATTGAGTTGGGATTTGATTTTTAGATCTTTAGGGGGCTAGCATATATCCATACCGTACCAGGAGTTTGTCATAGGGATGTAAAGCCTC AAAATCTTTTGGTACGACATTCTTTTGTTCTTTTACCTCAATTTGGTGTTTCATTTGTTATAAACTTGTTGGATGTATGAACTGCAGGTTCATCCTCTTA CTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAATTCTGGTCAAGGGAGAAGCAAACATTTCGTACATTTGTTCACGTTACTACAGGGCTCCAGA ACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCTGCTGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGA GAAAATCAGGTGGACCAACTTGTGGAAATAATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGAT TCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAG TCTTCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTCCGTGAGCCGAATGCTCGACTACCTAATGGCCGTCCATTGCCCCCACTT TTCAATTTTAAACACGAATTAGCTGGAGCATCACCTGAACTGATCAACAGGCTCATCCCAGACCACATTAGGCGGCAGACCGGTCTCAGCTTCCCTAATC CGGCTGATACATAGATGTTAAGAGATAATGAAACAATCGAGTGAACTGATCTAGTGATCAGCGACGCAAACGATGGGCTCTTGGTGGTCAATATAGCCGA CGGTTCCAGCTTAATATGTAGTTCCCCCCTGTGTAATGTATACATGTGCTAGCTGCTTGGGATGACAGGGAAATATGTGTACTATATAGTATGTAGTATT TCATTTTAGTGAAAGCATACTTATCTTCTGCATCTGTACATTGTTTTGGTCAGATTTCAGAAAGGTAGGAGTATTAAATGATAGCAATCTTGTCTACATA GGTGGGGAGGCCACCACAAAATTGGAGGGCCTCCTTAGTAGTTTGTCTTCCTTTTTACATGAACATACTCATGGTCACGGTCTTTGTTCTTTGTAATGTT ATGACAATCTCTTTATGTGAAACCAGATTTTTCATTATTGTTCAATACTCAACTTCCTTTGTTTCGACCACAAAGTTGATAGCGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_186625; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409942
| Blastp | Shaggy-related protein kinase eta from Arabidopsis with 89.52% of identity |
|---|---|
| Blastx | Shaggy-related protein kinase zeta from Arabidopsis with 92.2% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT4G18710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449087.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |