Ll_transcript_409947

• Id Trinity: TRINITY_DN51652_c1_g1_i13
• Name Transcript: Ll_transcript_409947
• Sequence: GTTATTATATTTTTAGGTTTTTTTCTTCAACAGAATAAATAGAAATGGCATAAAGGAAATAAACGAGTGAGTCAAACATCCACATTCATATTTGACTCGC TCCCATTATCAGCTGGCAAATGGAATCTCTTCTCATGGACCAAACCACACCTGACCGGATATTCCCGTCATCATCATCTCCATACTCACCAACCAACGGC TCTGATCTAGCGCGTGTCTTCACTCTCCATCTCCCTCATTGATTAAAAAAAATCAAACGAGTAAGAGAGAGAGAAAAAACAAAACAAAGGAAATAATTGA GACTGTTTCTCTTTCTAACATCACATGGCATCTATACCTTTGGGTCCGCACCACCACCACCAACCACCGCTGGCGCCACCGCAACAGCCCCAACCTGATG TTACTCGCCGGAGCTCTGACATGGACACCGATAAGGATATGTCAGCTTCTGTCATTGAAGGGAATGACGCAGTCACTGGCCACATAATCTCCACCACAAT TGGAGGCAAAAATGGTGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTCGTGGGCACCGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGCTTG GAGACTGGGGAGGCAGTAGCCATAAAGAAGGTTTTGCAGGACAGGCGGTACAAAAATCGTGAGCTTCAGTTAATGCGCTTGATGGATCACCCAAATGTAA TTTCTCTGATGCACTGTTTCTTCTCTACGACAAGTAAAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAGACGATGTACCGGGTTTTAAA GCACTACAATAATATGAACCAGAGAATGCCCCTCATCTATGTGAAACTATATACATATCAGATCTTTAGGGGGCTAGCATATATCCATACCGTACCAGGA GTTTGTCATAGGGATGTAAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAATTCTGGTCAAGG GAGAAGCAAACATTTCGTACATTTGTTCACGTTACTACAGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCTGC TGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATAATTAAGGTTCTTGGTACTCCG ACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGC CCCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCT CCGTGAGCCGAATGCTCGACTACCTAATGGCCGTCCATTGCCCCCACTTTTCAATTTTAAACACGAATTAGCTGGAGCATCACCTGAACTGATCAACAGG CTCATCCCAGACCACATTAGGCGGCAGACCGGTCTCAGCTTCCCTAATCCGGCTGATACATAGATGTTAAGAGATAATGAAACAATCGAGTGAACTGATC TAGTGATCAGCGACGCAAACGATGGGCTCTTGGTGGTCAATATAGCCGACGGTTCCAGCTTAATATGTAGTTCCCCCCTGTGTAATGTATACATGTGCTA GCTGCTTGGGATGACAGGGAAATATGTGTACTATATAGTATGTAGTATTTCATTTTAGTGAAAGCATACTTATCTTCTGCATCTGTACATTGTTTTGGTC AGATTTCAGAAAGGTAGGAGTATTAAATGATAGCAATCTTGTCTACATAGGTGGGGAGGCCACCACAAAATTGGAGGGCCTCCTTAGTAGTTTGTCTTCC TTTTTACATGAACATACTCATGGTCACGGTCTTTGTTCTTTGTAATGTTATGACAATCTCTTTATGTGAAACCAGATTTTTCATTATTGTTCAATACTCA ACTTCCTTTGTTTCGACCACAAAGTTGATAGCGG
• Tissue: pods
• Gene name: LI_gene_186625;
• Additional information: details;

Expression of Ll_transcript_409947

FPKM

• PAB: 65.5
• PNAB: 29.3
• PS1: 35.9
• PS2: 17.8
• PS3: 27.5
• PW1: 24.2
• PW2: 22.8
• PW3: 21.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409947

• Blastp: Shaggy-related protein kinase zeta from Arabidopsis with 87.56% of identity
• Blastx: Shaggy-related protein kinase zeta from Arabidopsis with 90.34% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT2G30980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449087.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;