Ll_transcript_409963

• Id Trinity: TRINITY_DN51652_c1_g1_i21
• Name Transcript: Ll_transcript_409963
• Sequence: GTTATTATATTTTTAGGTTTTTTTCTTCAACAGAATAAATAGAAATGGCATAAAGGAAATAAACGAGTGAGTCAAACATCCACATTCATATTTGACTCGC TCCCATTATCAGCTGGCAAATGGAATCTCTTCTCATGGACCAAACCACACCTGACCGGATATTCCCGTCATCATCATCTCCATACTCACCAACCAACGGC TCTGATCTAGCGCGTGTCTTCACTCTCCATCTCCCTCATTGATTAAAAAAAATCAAACGAGTAAGAGAGAGAGAAAAAACAAAACAAAGGAAATAATTGA GACTGTTTCTCTTTCTAACATCACATGGCATCTATACCTTTGGGTCCGCACCACCACCACCAACCACCGCTGGCGCCACCGCAACAGCCCCAACCTGATG TTACTCGCCGGAGCTCTGACATGGACACCGATAAGGATATGTCAGCTTCTGTCATTGAAGGGAATGACGCAGTCACTGGCCACATAATCTCCACCACAAT TGGAGGCAAAAATGGTGAACCTAAACAGGTATGTTCATGTTTCTTACCCTTTTCCTTCTTAACTTTTAGTTTTTGGAAGAAATTCACTTTATATCCTCTT AAGGTGTCTGTAATAGTGTATAGTGATTATTGTTTAGTTAATGATTCACTTCCTTTTGGGGGTTAATTGGAACTACATTTCGGGGTTGGGAAATCAAATT AATAAAATTACTTTTATCTCCTTGCGGAGTTCTGCCCATGGCCTCTTATAGAGGGTTCTCTTAGTATTTTTTGCAAAGATGCTAGCATGCTTTATCGCAT GTGTTTGGTTCTTAGTTTTTCAGGGATCTCTTTGTATTTTTGGCTTAGTTTTCAGCTATAGTTTCTGAGGATTACTATTCTCTCCTCTCTCTCTCTCTAT ATATATATATATGTAACTATACATATATATATATATTACCTTTTATATTCATGGAATCATGGGTCTCCAGAAATTAAATATTTGTTGTCAATCAGTGGTT GGCTTGTTTTTCCATTGCCTAGCCCAGTCCAGTAGTTTTTCCACCAACTTAATTTTTCGGTCACAGATGTATAGTTTTGAAAAATATTGATTTGTTGCGA TGATTTTGTAATAACTTTTTCAATACTTGAAATTGGTATCTAGTCTATGAATTTCCCAAATATTTTATTATCTTTTACGATAACATCTCTGAGACTGCTC ACAGACCATCAGTTACATGGCAGAACGTGTCGTGGGCACCGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTAGCCATA AAGAAGGTTTTGCAGGACAGGCGGTACAAAAATCGTGAGCTTCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGATGCACTGTTTCTTCT CTACGACAAGTAAAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAGACGATGTACCGGGTTTTAAAGCACTACAATAATATGAACCAGAG AATGCCCCTCATCTATGTGAAACTATATACATATCAGATCTTTAGGGGGCTAGCATATATCCATACCGTACCAGGAGTTTGTCATAGGGATGTAAAGCCT CAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAATTCTGGTCAAGGGAGAAGCAAACATTTCGTACATTT GTTCACGTTACTACAGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCTGCTGGCTGTGTCCTTGCTGAACTTCT TCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATAATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATTCGTTGCATG AACCCAAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCAATTGACCTTGCAT CAAGGCTTCTCCAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAAGCATGTACACATCCTTTTTTTGATGAGCTTCGCGAGCCGAATGTGCGACTACC TAATGGCCGTCCACTGCCCCCGCTTTTCAACTTTAAACAGGAAGTATGTATTTAATCGGTTTGTTTTATTGAATGTGATATATGCAAGGCATTTGCATTG TTTCATATTAATCATGTGTTCTTATGACTAATCATTGCATCATTTGTTCTGCATGATCTATACACAAGTGAATTCAATGTAACAATTTCTCATATTATCA TATATGTAAATTGCAAACAAGTATCTAACACCCCAAAAAATAGTAGAAAAAGTATCTAGTCTAAAACTAGCACAAACGCCATTGTTTATCGATGATCACA ATCAGTTCAGCTAATCATGATAGCAGTTTACAGCAGCCTGATTTCTAAAATGCT
• Tissue: pods
• Gene name: LI_gene_186625;
• Additional information: details;

Expression of Ll_transcript_409963

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.6
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409963

• Blastp: Shaggy-related protein kinase iota from Arabidopsis with 92.9% of identity
• Blastx: Shaggy-related protein kinase iota from Arabidopsis with 93.02% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G06390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449087.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;