Ll_transcript_409966

• Id Trinity: TRINITY_DN51652_c1_g1_i24
• Name Transcript: Ll_transcript_409966
• Sequence: CACACAGTAAAGAGAGAAAGTAGAGAGTGTCGTAAACCTTTCACATGGCCTCCATGCCGTTGGAGCCGCACCACCATCAACCACCGCAAGCACCACCTTC AGCTCCACCGCAACCGCCATCCCTACCATTATCGCAACAGCAACAACCGCTGCAAGCGGAGAATGACGCTTCGAACCCGGCGGTTCGTAGCGGCTCAGAA ATGGAGTCCAATAAGGAAATGTCATCTACTGTTGTTGATGGGAATGATGCAGTTACTGGCCACATAATCTCAACCACGATTGGTGGCAAAAATGGTGAAC CTAAACAGACCATCAGTTACATGGCTGAACGTGTTGTCGGTACAGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCATGGAGACTGGGGAGGCAGTAGC TATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAATCGTGAGCTTCAGTTGATGCGCTTGATGGATCACCAAAATGTAGTTTCCCTTAGGCACTGTTTC TTCTCTACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACGATGTACCGTGTTCTGAAGCACTACAGTAGTATGAACC AGAGAATGCCCCTCGTCTATGTGAAGTTATACACATACCAAATCTTCAGGGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCACAGGGATGTAAA GCCTCAAAATCTTTTGGTACGACATTCTTTTGTTCTTTTACCTCAATTTGGTGTTTCATTTGTTATAAACTTGTTGGATGTATGAACTGCAGGTTCATCC TCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAATTCTGGTCAAGGGAGAAGCAAACATTTCGTACATTTGTTCACGTTACTACAGGGCT CCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCTGCTGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTC CAGGAGAAAATCAGGTGGACCAACTTGTGGAAATAATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTT TAGATTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCA CCAAGTCTTCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTCCGTGAGCCGAATGCTCGACTACCTAATGGCCGTCCATTGCCCC CACTTTTCAATTTTAAACACGAAGTATGTATTTAATCGGGTTGTTTTATTAATTGTGATATACACAAGGCTTTTGCATCATTTACTTAATCACCATGTGT TATTATGACTAATAACTGCGTGATCTGTACGCAAGTAAACTCAATGTAACAATTTCTCATTTAAAGTGCTAACAAATATCTAAAACTCCAAAAAATTGTA CAATCAATTCAGTTAATAGTGATATCAGCTTAAAACAGCATGACTTGTGAACTGCAAATCATCATCGTAATTATTATAGCTACTGCTGACCATAGCTTCT GGGGTTTCTGTATAGTTTAATGATTCTGTAATGAAAACTGACTGCAGTTAGCTGGAGCATCACCTGAACTGATCAACAGGCTCATCCCAGACCACATTAG GCGGCAGACCGGTCTCAGCTTCCCTAATCCGGCTGATACATAGATGTTAAGAGATAATGAAACAATCGAGTGAACTGATCTAGTGATCAGCGACGCAAAC GATGGGCTCTTGGTGGTCAATATAGCCGACGGTTCCAGCTTAATATGTAGTTCCCCCCTGTGTAATGTATACATGTGCTAGCTGCTTGGGATGACAGGGA AATATGTGTACTATATAGTATGTAGTATTTCATTTTAGTGAAAGCATACTTATCTTCTGCATCTGTACATTGTTTTGGTCAGATTTCAGAAAGGTAGGAG TATTAAATGATAGCAATCTTGTCTACATAGGTGGGGAGGCCACCACAAAATTGGAGGGCCTCCTTAGTAGTTTGTCTTCCTTTTTACATGAACATACTCA TGGTCACGGTCTTTGTTCTTTGTAATGTTATGACAATCTCTTTATGTGAAACCAGATTTTTCATTATTGTTCAATACTCAACTTCCTTTGTTTCGACCAC AAAGTTGATAGCGG
• Tissue: pods
• Gene name: LI_gene_186625;
• Additional information: details;

Expression of Ll_transcript_409966

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.4
• PW2: 0.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409966

• Blastp: Shaggy-related protein kinase zeta from Arabidopsis with 75.11% of identity
• Blastx: Shaggy-related protein kinase iota from Arabidopsis with 91.53% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT2G30980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430166.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;