Ll_transcript_410343

• Id Trinity: TRINITY_DN51653_c0_g1_i15
• Name Transcript: Ll_transcript_410343
• Sequence: TGCAACTTTGCTTTAAATTTTTTGTTTTTATACATCATCGGTTTATCTATTATGTGGGTCTTCACTATTTTCGCCAATAATGAGAGGATTCAAATTGTGT TGTTAGACATAGCTAGGGCTTTGTGCTTGTTAGGGATAAACTGACATTAACTGTAATTACTTGAAATTATCATGCTAGGGTTGAACCAATTTGACTAAAT TTTACTGGGTCATTTTGGTATCAACCATAACATGCATGGGCTATGAAGTTATTAAAGGGGTATTGATCAACATATTGTAGTGGCTATAGAAGTTTAACCC TTGCTCTGTTAGATAGAAAGTGATTGGATGGACAAACATTATAGGGACTCTATGCCAGCTCATGGTGCTAAAGGATCGTCTGAGATTTTCTCACTCAATG TCGCGAAAAAAGTTGGAAGCAGCGCATGGGGAATACCAAGCAGGGATGATGCATTTCATGCTTCAAGTGATATTAGCTTGTTTTCTAGTTCACTTCCTGT TCTTCCTCATGGAAAGCTAAATGTTACTGGTTCTGAGCACTATGGTCAATCTGCTGATGATAACTTGCCAATATTAGACAAAGTTCACAAGGAGGGCGAG GGACAAGATCTACTTGAAGACATTACAACCAATGCAATGGAAAACATGCTTCCCGATGATGAAGATGAGCTGTTAGCTGGAATAATGGACGATTTTGACC TGAGTAGGTTGCCCAACCAGCTGGAGGATCTGGATGAAAATGATCTTTTTGGTAGTGGAGGCGGGTTTGAAATGGATTTTGAACCCCAAGAGGGCCTTAG TATCGGTATTTCAAAGATTAGCTTATCTGATGGAGTCCCTTCAAATGGTTTTGGTCATATTGCAATCCTAAATGGCACAGGAGCAGTGGCTGGGGAGCAT CCTTATGGAGAGCATCCATCAAGGACATTATTTGTGAGGAACATCAACAGTAATGTGGAGGATTCTGAATTAAGATCACTATTTGAGCAATATGGAGATA TCAGAACATTGTACACTGCATGCAAGCATAGAGGCTTTGTGATGATTTCTTACTATGATATTCGAGCTGCTCGCACTGCAATGCGTGCTTTACAAAACAA GCCCTTGAGACGAAGAAAGCTTGATATCCATTTTTCAATTCCTAAGGATAACCCCTCAGAAAAGGATATCAATCAAGGAACCCTTGTAGTGTTCAATTTG GATCCATCAGTATCAAATGACGACCTTCGTCAAATATTTGGAGCTTATGGGGAGGTCAAAGAGATCAGGGAAACACCTCATAAAAGGCACCATAAATTTA TTGAATTTTTTGATGTTAGAGCAGCAGATGCTGCTCTTAAAGCATTAAATCGAATTGACATTGCTGGGAAACGCATCAAACTTGAACCCAGCCGCCCTGG TGGAGCACGTCGAAACTTGATGCAACAAATGACTGAGCTGGAGCAAGATGAAACTCGAACTTTTAGGCATCAAGTGGGTTCACCTATTGCCAATTCTCCT CCTGGAAATTGGGCACACTTTGGGAGTCCAGTCGAACATAATCCATTGGGTTCTTTTAGCAAATCTCTCGGTTTGAGTTATGGCAGCCCTTTGAATACCA GCCATTTGCCTGGATTAGGAGCAATTCTTTCTCCACACGCGTCAACCTCTCCAAAGATTGCACCAATTGGTAAGGACCTTGGAAGGGCTAATAATGGAAA TCAAATTTTTGCAAGCTCAGGATCTTCACAAGGAGCGGCTTTTCAGCCTTCTATGTCCTTTCCCGAGCATAAATTAAATTCTAGCCCTAGGCCTATATCT ACTTTTGGTGAATCAAAATCAAGTTCTTCAAGTGTTGGAACACTGTCTGGTCCTCAATTTCTGTGGGGAAGTCCTACTCCTTACTCAGAGCATTCAAACA CATCTGCCTGGTCTTCAACTTCCCGGGGGCTTCCATTTACTTCTAGTGGACAAAGGCAGGGTTTCCAATATACTAGTCGGCACAATTCGTTTCTTGATTC TCACCCACATCATCATGTGGGATCCGCTCCATCTGGCCTTCCTTTGGATAGGCATTTTAACTACTTTCCAGAGTCACTTGAAACTTCTGTCAAGAGTTCA GTTGCATATGGAAGTTTGAATCATAGCAATGATAATTTTTTTATGAATATGGGTGCTCGTGCATCTGGAGGAGTTGTTGCTGGCTTTCCAGGAAATAGGA CTGAAATTAGTTCACCTAATTTCAGAATGATGTCACTGCCTAGGCATGGATCCTTGTTCCTTGGAAATGGTTTGTATTCTGGACCAGGAGCAACAAACAC TGAGGGATTAACTGAACGTGGTCGAAGTAAGCAACCTGACAATAGTGGGAACCAAATTGATAGCAAGAAGCAGTACCAGCTTGATCTAGACAAAATTATG AGGGGAGAAGACACAAGGACAACATTAATGATTAAAAACATTCCTAACAAGTACACTTCAAGTTTGCTGCTTGCTGCTATTGATGAGAATCACAAGGGTA GTTATGACTTCCTCTATTTGCCAATTGACTTTAAGAACAACTGCAACGTGGGCTATGCTTTCATCAACATGGTGTCTCCTTCACACATCATCCCCTTCTA CAAGGCATTTAATGGGCAGAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCTTCACTGGCATATGCACGTATCCAGGGGAAGGGTGCCCTTGTGACACAT TTTCAGAACTCAAGCCTAATGAACGAGGATAAGCGGTGTCGACCGATACTCTTTCATTCAGAGGGCCAAGAGATTGGTGACCAGGACCATTTCCTCTCAA ACAATTTGAATATATGCATTCGTCAACCGGATGGTTCTTACTCAGATGATTTGTTGGAGAGCCAGAAACACAATTCGAATGAAAAGGTTGAGAAAGATTG ACCCTCTGTTAGATATCTTGTTCCTAGCCATGATGGCTTGTAGGAGTGCTAAGCTAACTAGTGCATAGTTAATCTGAAGGTGTACAAAGCAATGTATCTC AATATGTTAATAGTCCATAAGAATGATCAAATGCAAATAAGCAAATAGTAGTTAATGTGTAGAGAAGCAATTATCATTTAACCAGTGGAAAAGAATAAGG TGGGGTGGGTGTATTGCTGGATTGTGAATTATACAGCAGCATGCATGCATGCATGCCAAATTGTGCAGAATGATTCCGACTGGGATTTGTTGTGGCTGTA ATTGGCCCACTGCAGATAGGACTAATGTTTATATTGATGGGATTATGATGAAAACAAGTTGTATAGAAGAGAAACAAGGAATTAATGTTTGTCAGTGTTG TCATGTTAACCAAAAAAGTGATGAATGTCTGAACAGATGTTAACAGTTCCTTGTCATTATATTTGTTTCATAGTATTGTTACTTAAACTCTAAATACTTT GATAAGAGTTGAAGTATTTTAAGGCAGTTTTTGTCTTTAATTGAATGGTGTCACTCTTGCTACAAAGATAGATAATGTAGTGACAGTGTAAAAAACACTA AAAATGCTTATATTATAGTGAATACAATTTCTTCTAGTTTCAGTTATCA
• Tissue: pods
• Gene name: LI_gene_186631;
• Additional information: details;

Expression of Ll_transcript_410343

FPKM

• PAB: 3.8
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410343

• Blastp: Protein MEI2-like 2 from Oryza sativa with 55.81% of identity
• Blastx: Protein MEI2-like 2 from Oryza sativa with 55.99% of identity
• Eggnog: Rna-binding protein(ENOG4111R9F)
• Kegg: Link to kegg annotations (4330544)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435216.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;