Ll_transcript_409277

• Id Trinity: TRINITY_DN51663_c0_g1_i14
• Name Transcript: Ll_transcript_409277
• Sequence: CGAGGGTTTTCTAGTACATTTTGGCGGAAAACCTGAGTCGAGTCCTACTCTCACTTTCTGTTTTCTACTTCCTCACTTCTCTAAACCCATCATTTCTCTG ACCTAGCATCACTCACCGCCAACCACCGTCGCCGCAACCACCGATTCAACACTCTCCGGTCAAGTTCAGTGAACCTCCGTTTTCACAAGCTTCTTCAACA GCACCTTCATTAACCTAGAAATCATGCACGCTCCGGTTCTAGTTCTAAAGGACTCTTTGAAGCGTGAGTCTGGAACCAAGGTGCACCATGCAAACATTCA AGCATCTAAGGCTGTTGCTGACATAATCCGTACAACATTGGGACCCAGGTCCATGCTAAAGATGCTACTTGATGCTTCGGGAGGAATTGTGGTGACTAAT GATGGGAATGCTATCTTACGTGAACTAGATATTGCTCACCCAGCTGCGAAGTCTATGATTGAACTAAGTCGAACCCAAGATGAAGAAGTAGGGGATGGAA CCACATCTGTCATAATTCTTGCTGGTGAGATGCTCCATGTTGCTGAAGCATTCATTGAGAAAAAGTATCATCCTACAGTCATTTGCCGAGCTTATAACAA AGCCCTTGAGGATGCTATTGCCGTTCTTGACAAAATTGCATTGGCCATTGATCCCCAGGATAGAGCTACAATGCTTGGGCTAGTAAAAAGCTGCATTGGT ACCAAATTCACTAGTCAATTTGGTGATTTAATTGCTGATTTGGCTATCGATGCTACTACAACAGTAGGTGTTGATATTGGCCAAGGTTTAAGAGATGTAG ATATTAAAAATTATATTAAGGTTGAGAAGGTCCCTGGTGGGCAGTTGGAGGACTCAAGAGTTCTTAAGGGTGTTATGTTTAACAAAGATGTGGTTGCCCC TGGCAAAATGAGGAGAAAGATTGTTAACCCACGTATCATTCTTCTTGATTCTCCTCTCGAGTATAAAAAGGGTGAAAACCAAACAAATGCTGAACTGCTC AAAGAAGAAGACTGGAATCTCTTATTGAGGATGGAAGAAGAATACATTGAGGAGATTTGCATGCAGATACTGAAGTTTAAACCGGACTTGGTAATTACAG AGAAGGGTCTCAGTGATTTGGCATGCCATTATCTGAGCAAGCATGGAGTTACTGCAATCAGGAGGCTGAGGAAAACTGATAATAACAGAATTGCAAAGGC ATGTGGTGCTGTTATTGTCAACAGACCAGATGAGTTGCAGGAGTCTGATGTTGGTACTGGGGCTGGGTTATTCGAAGTTAAGAAAATTGGAGATGAGTTC TTTGCATTTATTGTTGATTGCGAAGACCCTAAGGCTTGTACAGTACTATTAAGGGGTGCAAGTAAGGATCTCTTAAATGAAGTTGAAAGAAACCTACAGG ATGCCATGTCTGTTGCAAGGAACATAATTAAAAATCCTAAACTCGTTCCTGGAGGTGGTGCTACAGAGTTGACTGTATCAGCCACTTTGAAACAGAAGAG TTCATCTGTTGAAGGCATAGAGAAATGGCCTTATGAAGCTGCTGCAATTGCTTTTGAGGCTATACCACGTACTTTGGCACAAAATTGTGGAGTAAATGTA ATCCGAACAATGACTGCACTACAAGGGAAGCATGCGAATGGAGAAAATGCATGGATTGGTATAGACGGGAATACTGGTGCCATCACTGACATGAAAGAGG GCAAGATCTGGGATGCCTATAATGTGAAGGCACAAACATTTAAGACTGCCATTGAAGCTGCTTGCATGCTTCTGAGGATCGATGACATTGTGAGTGGGAT CAAGAAGAAGCAAGCCCCTGGATCAGGCCCTGCAAAGCCTAAGATTGAGACTGAAGCTGATGCTGACAGTGAACAAATCCTTCCTGATTGATAACACTTT AACTCACTGGTTTTTGACATCTACAGTTGAAGACGTGCTAGGTTCTTTAAATATTATTATTACTATTAGAAATTTTGGGTCCTTAATTAGGCTGTTTACT ATTTCCAAGTGCAATTGTGAGTTTCTTAATGCTACAATTAGCTAGCACATTCTTTATTAAGTTTATTATCTGCGTGGTTGAATTGCTCAGTTTAACCACT TCCGAGTTGCCTATTGAGTTTATTTTTCTTTTCTTGTGTGAAATCGTAATATCTACTTATCTAGAGCACGCCCTTAGAACTTGTTCCACTAAATTGTGCA GTTACATCTTTTGTTTTTGCTTTTCATATAGATTGTACTATGGATAGATTAACTAAATACTAATCAATTCAGAAAAATCAATGCATGGAAAAAA
• Tissue: pods
• Gene name: LI_gene_186703;
• Additional information: details;

Expression of Ll_transcript_409277

FPKM

• PAB: 1.7
• PNAB: 15.4
• PS1: 9.3
• PS2: 11.2
• PS3: 12.4
• PW1: 8.7
• PW2: 14.4
• PW3: 15.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409277

• Blastp: T-complex protein 1 subunit gamma from Arabidopsis with 90.27% of identity
• Blastx: T-complex protein 1 subunit gamma from Arabidopsis with 90.27% of identity
• Eggnog: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)(COG0459)
• Kegg: Link to kegg annotations (AT5G26360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458247.1)
• Pfam: TCP-1/cpn60 chaperonin family (PF00118.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;