Ll_transcript_408132

• Id Trinity: TRINITY_DN51666_c1_g1_i1
• Name Transcript: Ll_transcript_408132
• Sequence: GAACATAAAAAAAGGATTTTTTTTTCGTACAACGAATATAAAGGAATTTAGATGCCCTTTTTCTCATTCTCATTCCCATTTTCATTCTTCTGAGTTCTCG TGAAGGTGGAAGTGATGGCAGGACAATCAAGAAAGTGGATGATATTGGTAGCAGTAATATGGATTCAAGCATTCACTGGCACCAATTTTGATTTCTCTTC TTATTCATCTACTTTGAAATCTGTACTCAAAATCTCTCAAGTTCAACTCAACTACCTTGCCACTGCCAATGACTTAGGCAAAGTTTTTGGTTGGTCTTCA GGTCTTGCACTCATGTATCTTCCTCCTTCAATTGTTATGTTCATTTCTGCTTTCATGGGTTTCATTGGTTATGGACTACAATGGCTTCTTATCAACAATC TCATCACTTTGCCTTATTTTCTGTTGTATATTGTGGGTAGCCACAATCTGAAACTTTTTTGGAGGTGGGCTGCAGCAAAATAACTCAGTGGTGCAATCAC AGTTGAGAAGGGGCAATGTGGCTTTGCAAATTTGCAGTGCGGCTTCTGCTGTGTAGTGCTGTGAGTTTCACCATCCAATTATGGGATTATGCAGATAAAA TTTGATAGCTTGCAGGCAGTTCAAATTGCTAATGCAGCTTGGTTTAGTTTGCTACAACTGACATAATTTTTATAGAATCTCCGTTTACGGGGTAAGGCTG CGTACGTCTATGTTCCTTCGACCCCACTAAATGTGAGCCTTGTGCACTGGGCCATCCTATTAGGTGTATATTTTGGGTAAACAACTTAATTAAATACTTG GGAGCTTGGATAAACAATTTAATTAAGTGCTTATTCCAAAAGTTTTTTTGAAACAGGCTAACAAGAACTTATTTATATAAGTTTCTCTTATAAGCTTATT TGAAATGAGCTAAAAAGGTTGTAGGAATGTTATAAGATACTTTAATAAGCTATTTTCATAAGTTGTTCTCATAAGCCAAATAAATTCTCTATCAGCTCTT CCAAATCCCCCAAACCCCCAATCATGAGATAACAATATGTTAGCTACACCGCCTACACAGTATCAATACAAGCATAGAACAAAGATATCTGCACAACAAA TTATTCATTTATGTTAACAACTTTGAAATAAATTTGTAAGTATGAACTTAGCTGTATGTTTTTCACTATATAAATATGCTGCAGCAGTGCAGGTGAAAGG AATACATTAACTCAATGAAATTGAGTATATATGATTGCATTTACCAACCAAACAAATGAACAATGGCTACCTAACTATAAATTGAAGCAGAGCTAAAAAT TTAGTCTGAGCGAGGTCAACTGAACCTAACCGAAACATGAAAAATTGCTTTGATTAACAATATATCCAATGAACCTCACTCAGTTGCAATATACAGAGAA TTACTTTGACCAGTTCTTACTTTGCATGTGGCAGGTTTTTCTTCTGTGCCTGTTAGGAGGCTGCAGCATTTGTTGGTTCAACACAGTATGTTTTGTTGTC TGCATTAGGAATTTCCCAGTTAACAGGCCCCTTGCATTAGCACTCACTGTGAGTTACAATGGTGTAAGTGCAGCACTCTATACCCTTGCTGCCAATTCAA TAGACCCCTCATCCGATGCAGTGTATCTGCTTTTGAATGCCCTTGTTCCCCTATTCATTTCCTTTCTAGCATTAGTCCCTATCCTTCGCCAACCACCTTT AGAACCTCTTCGTCCCGATACAGCTCGCAAGAACTCACTAAATTTCCTGATACTCAACTTCCTAGCCATTTTCACTGGCCTTTATCTCCTTGTCTTTGGC TCATCAGCTTCTAATGAAAACACTGCAAGGCTTTACTTTGGAGGAGCTACTTTGCTCCTCATTTCTCCACTATGCATTCCTGGCATTATATATGCTAGAG ATTGGTTTCATCGAGCCGTCCATTCCAATATTAGGGTGGAAAGTTCTGGCTTTATACTTGTGCATGTTGATGATCTTGAGCTCCATAAAGAACTCCTTAC TCGTCAAAGCAGTACTGCAAGCAATGGAGATGGTCACAACCTGCTGAGTGACAATGGATCCATGTTCAGGGCAAAAAGTAGTGGCATGTGTTGTGAGGGG TTGCTTGATCACAATCAGTTGGCAATGCTAGGAGAAGATCACTCTGCTGGAGTGCTTGTCACAAGGTTGGATTTTTGGCTTTATTATGTTGCATACTTCT GTGGCGGTACAATTGGTCTTGTCTACAGCAATAATCTAGGACAGATAGCCCAATCTCTGGGGCTTCATTCAAATATTTCTACTCTTGTCACGCTATACTC ATCCTTCTCCTTTTTCGGCCGCTTGCTTTCAGCTGGACCAGACTATATTCGAAATAAGTTCTACTTTGCAAGAACCGGATGGCTAACCATTGCACTGATA CCAACCCCAATCGCGTTCATAATTCTTGCTACATCAGAAAGTGCTGTGGCACTTTATATAGGAACTGCACTAGTTGGTTTGAGCTCAGGTTTCATATTTG CTGCTTCTGTGTCGGTTACATCTGAACTGTTCGGACCTAACAGTTTTAGTGTCAATCACAACATCCTCATAACAAATATCCCAATCGGGTCACTTCTCTA TGGTTTTCTATCTGCAGTAGTTTATGATGCCAATGCTCACTCAGTGCCAGAAAATATGATGTCTTATACACTAGTGTGCATGGGAAGGAAGTGCTACTTG TGGACATTTGTGTTGTGGGCATGCATATCTGTCCTGGGACTAGCTTCTAGTGTGCTATTATTCTTAAGAACCAAACATGCCTACGATTGTTTTGAGAGGC ACCGCATTTCAGCACAATCAATCCTGTCTTAATTGTTGGCACTGTAAAGATTTGAAGATCATAGCACCCTTGATAGCAGAAGTGATCTCATTTAATTCCT AATTATCAATATGCAAATACATGTTTTTCTACCTTTTCTATGCAATTCACATGCTTTGTCATTTCTCTCTATCTACAATTCCACTTGTTGGATTGAATGT CATGTTTCTCTCTTCTACTTGACTAATTTTAATAATACATATTGATGAAGTATCATAAAATATTGGTATAAGATATGGATATGCAAAGGATATTGAAGTA TATGTGATTCGTAGTTTACTCTTATCGAGTAGAACTAGTCTTTACCTAGTACCCGGTATGGGTACGATTTAATCGACTCTATTTCAACAGGACACTTAGC TATTTCCCAAATCCTGTTTTGAGAATTCTGATCAGCTACAGTTCAAGCAGAAACAGACTCATCATGACATCCTTAGAAGTCTGACAAAGAAGTAATTGTG AAATTTTCCAGACTTGATTGTCATTAATTATTATATGCTGAATCTTTAGCATGTACTATGATGCACCATTACAATCACCATAATATTGTTTTACTTTATC AGTACAATTGTATGTTCACATATTTGGTGTTTCAACTCATTTGGTGTTCTTGTATGTATGTATGTTCACATATAATATAAAATATCAGTTCCTC
• Tissue: pods
• Gene name: LI_gene_186717;
• Additional information: details;

Expression of Ll_transcript_408132

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408132

• Blastp: Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 54.09% of identity
• Blastx: Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 54.25% of identity
• Eggnog: Nodulin-like(ENOG41105RT)
• Kegg: Link to kegg annotations (AT1G31470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421717.1)
• Pfam: Nodulin-like (PF06813.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;