| Id Trinity | TRINITY_DN51668_c7_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_410791 |
| Sequence | ATTGATTTGTGATACCTTTTAAGATACCATTTGGACATGTGATCCCAATCTATCATTTCCCTCTTATAAATACGGCTTCAAAAACCTTTGCTAACAATCA TAATATCACACACATCTTTTTCTTGTCACCATAGCTTAAATTAATAATGTCCAACCAAAACTCTCTACCCCTCTATGAAAAACATTGGTACAAACATAAT TTCAAACGGGTAATGGATGTGCTGATTTTGTTCCTCCTCTTATTGCTTCTTTGTTACCGCGTTACCTCTGTTAATAACTACTCTATCCCTTGGTTTGTTG CATTGGTATGTGAATCATGGTTCACCTTTTCTTGGATTTTCATTTTCACAACTCAATGGACTCCTGCAATAGTTAAAACCTACCCAGATCGTCTCTTACA TAGTGTGCAAGAGCTTCCACGTGTGGATTTATTTGTGACAACAGCAGATGATGTGCTAGAACCACCAATAATCACAGTGAACACTGTTCTGTCTCTGTTA GCACTTGACTACCCAGCTGAGAAGCTAGCTTGTTATGTTTCTGATGATGGCTTTTCCCCTCTCACCTTCCACGCTCTTCAACAAGCCTCACATTTTGCAA AGCTTTGGATCCCCTTTTGTAAGAAGTACCATGTGCAAATTAGAGCTCCATTCAGGTTCTTCTGTGACCAGAATGGGGCCTCCTCGTACCAAAACACAAC ACCAAAATTTAGAGAGGAATGGTTATGGATGAAAGTAAGTGTTTGACATATATATAAAGTTGAAATAAAAAAACCCTCATATCAAATTAGCTAACTGAAA TTTGTCAGAGCTAGATGATATTAGTAATCGGTTCTGAAGTCATAAATGGCATTTTCATTTTGGAAATGAGTCATAAGCTAATTTGTTAAGATGGTATGTC ATTTACAACTATATAAATTTTATATATTGTCATTCTTATATTTAATTCTTCAAATAAAAATAATTTAAATAAATAATATGTGACAGTATATAAATTTTTA TAGTGATTTATATTCTATCAATTAATTGAAACTAATGATTTATTATCCTATAAAATCATCATAGATTCCATCTTAAAGACAAGAAAGAGACATGTGAGGA ATTAATTATTATAAACACTAACAAGAAAATACTAACAAGACATTGATATGTAAAGCTCAACTAGATCCTAAAAGTCAAGTGTTTTATGTGAATAATATTT GTTAAGAGGGTTAACCACAAACCTAAAAAAAGATTAGTTCCCTACCGTACCAAAAAACTAACCATTTATGGGGAGGATCAATTTGTTATAAGAGTAGGTT TAAAATATTTACTTCTCATCTTAGGCATCAATTCTAGAAAAGTTTGAATTAGTGATAGATTCAAACAATTCAATTTTTAATGAATTGATGACTAAAATAA GAAGTAAGTCTAAAAAGACTTACTCTTGGAATAAATTGATCACTACCCATTATTTATAGAATTTATAAACTAATGTAATGTTTTAAGAGAATATGTTATT TTTCTTTAAAAGTAAGAGTAACAAAATTAGGCATAAGTGACATGTGATTTGAGTTGGCAGGAGAAGTATGATAATCTTTGCCACAAAATAGAAGAGGCGT CCCATAAATCAATTCCTTGGCAACTTGATGGAGAATTTGCTGTATTTTCAAACAGTGACCGCAAAAATCATCCAACCATTATACGGGTTATATGGGACAA GAATGAAGGGCTTTTTGATGGGTTGCCACATTTGATCTACATATCTAGAGAGAAGAGATCAAACCACCCACATCATTTCAAAGCTGGTGCCATGAATGTG TTGACAAGAGTCTCTGGATTGATAACCAATGCTCCATTCATGCTGAACGTGGATTGTGACATGTATGTAAATAACCCAAACATTATTCAGCATGCAATGT GCATTTTGCTTGATTCCATTGGAGACAAAGAAGTTGCATTTGTTCAATGCCCCCAACAATTTTATGGTGGACTTAAGGACGACCCTTTTGATAATCAAAT GGTGGTTATGTTTAAGGTATGGATAACTAAACACTTAAGATAAATTAATATAACTTGCTTCTACAATATATACTGAAGTTCTAACTTTTTTGTGCCCTTT TAAGTACATTGGGGCTGGACTAGCAGGACTCCAAGGACCTTTCTATGGGGGAACAAATTGCTTCCATAGAAGAAAAGTTATCTATGGACTTTCTCCATAT AACATAGAAAAGGGTACTTATAATTATATATTGGGTATTGCCATTGTTTCCAATTTTGTAAGATACAATATTAAATCTAAGATATGTAGCTGATCTTGTA GGAAATATTATATCAGAGAAGGAGTTAAAACAAAAATTTGGAGGTTCAGAGGAGCTTGTGAAATCAGTTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_186727; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410791
| Blastp | Cellulose synthase-like protein B3 from Arabidopsis with 52.97% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein H1 from Oryza sativa with 57.69% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT2G32530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453795.1) |
| Pfam | Cellulose synthase (PF03552.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |