Ll_transcript_408100

• Id Trinity: TRINITY_DN51670_c0_g1_i6
• Name Transcript: Ll_transcript_408100
• Sequence: CGATACTCTACGCCTTTGACCAACCAATGAATTCTACTCTAATCGTCACCACGACGGTGCAAATGCCGTTTCTCAAATCGCTCAACCGCCACATCACCGC ACCTCCTCACAACCTCCTCCTCCTCCGCCGCAACAACCTCAAATACGTTGTTGCTTCTTATAACAACAGCTCTCACTGCATTTCCACCTCCTTCGCTTCT GCTCCATCGTCACGCTCGCTCTGTGCTTTCAGTTCACTTCTCCGACGAACGCCGTTCCTTCTGCGGTGTGTTTCAAGCTCCGACGCTTCCTTTGCTTCTT CAGCCGGCGGAGGAAATTCTGGCGGTGGAGTTTCCGGCGGAAGTGGTGGAGGTGGTGGTGGTTCTGGCGGGGATTATGGAGATGGTAGTGGTAAATTGGT TGTAGACGCGGCGGTTCAGGATCTTTCAGAAGTTTCAGCGGACGTTATTATTTTAGATGTTTCGGGAATGGTGTGTGGTGGATGTGCAGCGAATGTGAAA AGGATCCTGGAAAGTCAAGTAAGTTGTTCAAATTTTGTATTTGATTTGATTTGATTTAGATGCTTCAATTACTAAGATGATAGGGGTTCTTATAGGTTCA ATTTAATGTTGATGATGTTCTGCTAACTTGCTAAGTTTATATTGTTAGTTATTGAAACTGGATAATTATGAGCTCACCATATTTTTATAATTTCCTTAAG CCTGTGGATGTTCTTGGAGAAAATTAGCAACCGAGGTGAAAAAGTTATGCTGAGAGATTTAAAGGGAATGTGGTAGTTTACTGTCTGGGAAGTGGGAATT CTTAATTTGAATTTGCTCTTTTATACATATGGATTCCAGAAAATGAAAAACAGTCGAACAAAGAAATTATTTGCGGGGAAGGGTAAAATTGGCATTCTAG TTTGGTTCCATGCCATCTTTTCTGATAAAAATAAGATGTAATAAAGGAAAAAAATCAATGAAAGAAATATGAGGTAAACAAAGTTTATATCTTCTTTAGA TGTGTGAGCATATATAGTTTTATTTTTAACTTTTCAGTAATATAAATCATGGTTCTTTAATTTTATGTCGATGGACAGCCACAAGTATCATCGGCTAGTG TAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAGACTGCACCAAATTGGAAAAAGCAATTAGGAGAGGAACTTGCACAGCATTT AACTGGCTGTGGTTTTAATTCTAGCCTTCGAGGTGATGAAGATAGCAACTGAAGCAGTTATTTCATTCACCATATAAATGCACTAGAGTGGTTGTTTGGA GTTGATGGTATGTCCCCAATTCACGAGGTTATGAGTTCGCCATGATACCTTTTATTTCACTAAACTGTTTTCAAGTTTGATATCCACCTTTCCTAGATCT TAAGCATAGTTTAGAAACCATCATTGATGTTATAATTTCTCCCTTCAGGAGGTGAGTATCTGTGATCTGTGGCTTCTTGTGGTGGGTAGGAGAGACATCT GTGTTCAGGCGACCTTGCATGTTGAAGAGTTTGCTGATGTTGAATCTGAAAGTAGCAATCCTTTAGTTTTGAAGATTTTTGAGGACTCTTATGAATTGAA GTTAGTTGTGCTTTGTTTTTATGTATGATAGATGGGGATATATAATTGTATGCCGAACAAATGTTCAGAACTACTGTATTTTATTTTTACCCACTACAGT GTAATAAAATTTCAATACATTTATCATGGTCACATTTATTTTCTTCTCCTGTCATAATGTGTTTTTTCCTACCCCTCATTGATTTCTCTTCATAATGTAT GGTGGAGATTACAATGATTCGAGCTTTTCTGCTTTTATGGCCC
• Tissue: pods
• Gene name: LI_gene_186739;
• Additional information: details;

Expression of Ll_transcript_408100

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408100

• Blastp: Copper-transporting ATPase PAA1, chloroplastic from Arabidopsis with 75% of identity
• Blastx: Copper-transporting ATPase PAA1, chloroplastic from Arabidopsis with 70.91% of identity
• Eggnog: p-type ATPase(COG2217)
• Kegg: Link to kegg annotations (AT4G33520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461307.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;