Ll_transcript_409133

• Id Trinity: TRINITY_DN51674_c0_g1_i16
• Name Transcript: Ll_transcript_409133
• Sequence: CTTTTATCCATCTTTATATCCCGCGTGGCCGCGTCCCCTGTCCCTTCATCTTTATATCCAGCTTGCACATTCATGCATCTTGCCTTACATTGAAAATGGA GCGACAGGAAATAAACTCATCTAAAACCTGAGACTTGGAAGACTCAATATAGTCAAATCGTAAACAAGGAAATTTGAAGCATATTCAAAATGTGCTAATC TAATAATATTATAAGGTTCCATTAGAAAAAGACAGCTACGCATCAAAAGAGGATTCCTTACCATATGCAAAATAAATACCAATCTTAGTTTCATTGGTCT TTGTAATCTCCAGCTATTCACACGAAATTGAAAGAAAAAGGCACGTAACGTGACTATTCTAAGAGTGTACTATATAGCATGCAAATATAAGACACAAAAC AATTCCTCTACCATTTCTCTCTTTCTCTCAACCTTCCACCGATAATGGCTGCGTCGCCGTCACCATCCACGGCGGCCACCACCAACATCATGCTACCCAT CCACGAGAAGAAAACAAACCAAATTGATCTCTACCGTCCCCTCCGCTACTACATCGCCATCCACTACTCAGAACGCGAAGCTCAAAACCTCGAAGATGAT CTCCAAACCCTAAAACAACTCCGCTCCGATATCGAGCGAAACTCCGACCCTTCCCTCCACGCGCGCCGCGACCTCCTCCAATCCTATTACAGATCCCTCT GCCTCGTCGAAACCCGATTCCCAATCTCACCCGACCCGAACCACGTAAACACGTTAACGTTCACCTGGTTCGATTCGTTCAAACCGAAGAACAAATCATC TCAGCAGAACATTCACCTTGAGAAAGCCTCAGTGCTCTTCAATTTGGGTGCGGTTTATAGTCAAATTGGATTGTCATATGATCGGAACATGGTTGATGGT CGACGCCAGGCGTTGCACGCATTTATCGCGGCAGCGGGGTCGTTTGCTTACCTGAGGGAGAATGTGGCTTTGAAGGCATCGGGTGGAGGTTCTATCACTG CGGATTTGTCGGTAGAATGTGCGGGAATGTTGGAGAAGTTGATGTTGGCTCAGGCTCAGGAGTGTGTGTTTGAGAACACCATTGCCAAAGGGAGCACCCC CGGCGTTTGTTCTAAGATATCTAGGCAGGTATAGTGCTTTGATGCTGAATTAGTCACTCATTTGCTTTGAATCCTGGATTTTTAAGAGTGCATGTTCATT CTATAGTAAAGGCTCAAACTGGTATATAAAAGCAACCTTTAGTCGTTAAAAAACTAACAATTTCTCGTGACCAAAGGTTTACCCGTATTTTTTTTAAATT TTAAATATGAAATATGAAGTGTGAGCATGGAACGTTTTGTATGTGATTAGTGCTTTGCTAATTGTCAATTCTGATAGCTGCTCTGTTGTCTATCTTGTGG CTTGCATTTGTGACGATGTAGGTAGGGCTGTACTATGAGGAAGCATTAGCTGCGCTGAATATTGCACCTTTAACCCAGCATTTTGATAAACCATGGGTAG CTCATGTGCACTTAAAGGCAGCTCTATTCCACGCGGAAGCTTGTTATAGGTATGGATTAGAGCTACATGAAAAAGAAGAAATAGCAGAGGAGATCACACG ACTCCGGAGTGCTGTAAATGTGCTAAATGAGGCAAAGAAAAACTCAAGGGGTGCTGCAGCACAGATTCTAGATGCGATCAGCAAGTTACTGGCCAATATT AACAGAAACCTGGAGAGGGCTGTCAAGGAGAATGATAGAGTTTATCTCATGAGGATTCCATCTTTCACTTCCTTACCACCTCTTCCAGCATTTTCTATGG TGAAGCCAATGGCAATGAATGAGGTGCTTGATGCAAGTAAAGAGAAGATGTTTGCAAGCCTTGTTCCTGACAGCAGTGCAAAGGCCCTCTCCAGGTACAC TGAAATGGTAGATGACATTATAAGAACACAGGCTGAGAAGTTGCAAGAAGCTAGTGAGCTAACACGAGTTAGGCTCAAGGAAATGGAACTGCCAGATTCT ATTCTTGCTTTGGAAGGAAATTTTTCTCTGCCAACTCATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGAGGCCCTTCTGGTTTGGATGCAGAAT TGCAGCAACTTCAGGACCTAAGGAGGGTAAATCAAGAATTCTTGGTCCAGACTGAGGAGCTGTTACAGAAGGAAGCAAGAGAAGATTCTCAATTTAGAAG TCAATTTGGGATGAAGTGGACTAGGCCTCAATCAAGCACTTTGACAAAGAACTTGCAGGACAGATTGAACAGATTTGCAGGTAACTTGAAGCAAGCTGCC GAAAGTGATGGTCGTATTGAGCGTTCAGTTAGAGAAAATTCAGCATTCATGTCAATCCTTGATTCCCGTCCGATTGAATCTGCACTTCCAACCTTGGCTA GGCCAATAATGTCGTTGGATCAAAATGAAGATGCTGTTTTGGGGTCTCTCAAGCTGAGTTTGAGGCAACTAGAAACTCTGGGAGCTCAAAGAGCTGGTCT TGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATACTACCCAAGTTGATGACATCAACTGGATCTTATGACGATCTCTTCAAGAAGGAGATAGCA AAATATGACCATATTTGTGAAGAAATAGCTCAAAATATCGAGGCACAAGAACAGTTGTTGCTGCAGATCCAGGCTCAAAATGATGATTTCTCTGCTATCT TCAATCTTGAAGATTACAAAGCTTCACGTGAAAAGTCGTACAAGCAGATTGAAGCTGCAATAGCAAAGTTCCGAGAAATAAAGGATAACATCAATGAAGG GTTAAAATTTTATGTTACCCTGCAGGATGCGATAACAAATGTAAAGCAGCAGTGCAGTGACTTTGTAATGACGAGAAACATCCAGTGCAGAGAAATGATT GAAGATGTTCAGAGGCAAGTTGCTGGTCTCAGTTTCCAAGATAACAGAAACACCAGTGCTTTCAACGGCAACTACCCTTCAGTGGGACACCAAAACCAAA GGCCCAATGCGCAACAAACAGATACTCGTCCACAAACACCATACTATCAGCCATCTGAGCAGCCACCGGTGTCCGGTTACGGTCATGCCCCTAACCCATA TGGTCCTGGTCCTGCACATCAACCTCCACCTCCATACCACATTCCACAAACATCAGGTGCTTCATATCCACCTCCTCCTCAGGCCCATCACCCACAGGCA AGTCATGACTATGGCCAACCTGCATATCCAGGATGGCGTGGTCCATACTATAATGGACAAGCACAACATCAACAACAACAACCTGCATCTGCACCCCAGC CTCCTTATACTGCCCAATCTCCGTATCCTCCTCACCAAAGTGGCTACTATAAGCAGCAATAGTGTTCATCCTGTGTAGGATAAAAGATAATACTCACTTT GATGTTATTGTTGCTCCATGAATAAATTGGTTTTATCTTGATCTACCCTTTTGAACTTGTCTATGTTCTGTTGGATTGGGTTATTATTGGATTCTTAGTA GCTTAGCTTATACAAGATTGCTCTATGTAAAGCCTATTTTTGTAACTTATACTTTACTGAGAGGGATTTTCCCAGGTGTAAATGCTCGGTCTTGAAAGGA AATACCAGTGTGCAGATTCTCGTTGGTGGGCCA
• Tissue: pods
• Gene name: LI_gene_186783;
• Additional information: details;

Expression of Ll_transcript_409133

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 1.1
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409133

• Blastp: Vacuolar-sorting protein BRO1 from Arabidopsis with 70.56% of identity
• Blastx: Vacuolar-sorting protein BRO1 from Arabidopsis with 75.67% of identity
• Eggnog: Rhophilin, Rho GTPase binding protein(ENOG410XQX6)
• Kegg: Link to kegg annotations (AT1G15130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456175.1)
• Pfam: ALIX V-shaped domain binding to HIV (PF13949.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;