Ll_transcript_409120

• Id Trinity: TRINITY_DN51674_c0_g1_i3
• Name Transcript: Ll_transcript_409120
• Sequence: CTTACCATAACCGGTTTCCTTTGTCAAGAAGTAAACCACCAAAAATATACAAAGATGAATTATAGTTATTACTATTATTACTGATATTGACTCAACTGAA ATCTGAACTTTCTTACAACCAAACACATTTTATTACCAAATCAATTCTTCATCATCATCGCCGCCGTCCACCCATGGCCGCGGCCACCCCCACCCCCAAC GTCATGCTCGCCATAACGGAGAAAAAAACAAACCCTATCGACCTCTACCGCCCTCTCCGCAACTACATCTCCCTCCACTACTCCGAACGCGAAGCCCAAA ACCTCGAAGACGATCTCCAAACCCTAAACCGCCACCGCTCCGACATCGACCGCCGCTCCGATCCATCCCTCCCCGCCCGCCGCGACCTCCTCACGTCGTA CTTCAAATCCCTCTGCCTCGTCGAAACCCGCTTCCCGATTTCCCCCGATCCCTACCACGTCAACACCGTTACCTTCGTCTGGTTCGATGCCTTCAAGCCC AAGCAAAAGGCATCTCTCCAGAACATTCATCTGGAGAAGGCTGCTGTTTTGTTTAACCTCGCAGCCGTTTATAGCCAGATCGCGCTTTCGTTCGATCGAG GCGCCGCGGATGGACGCAGGCAGGCGTTGCATGCTTTTGTTGGTGCTGCTGGGGCGTTTGCTCACTTGAGGGATGGCGCCGCGATGAAGGCGGCGGTTGG GGGTTCTGCGACGGTTGATGTGTCGGTTGAGTGTGCTGGGATGTTGGAGAGGTTGATGCTGGCACAGGCGCAGGAGTGTGTGTTTGAGAATACCATTGCT AAAGGAAGCACTCATGGTGTTTGTGCTAAGATTGCTAGGCAGGTTGGGCTCTACTATGAGGAAACTTTAGCTGCACTGAATGTTGCACCTCTAAGCCAGC ATTTTGAGAAATCATGGATAGTTCATGTGCAGTTAAAGGCAGCTTTATTCTATGCAGAAGCTTGTTATAGGCATGGATTAGAGCTACATGAGAAAGAGGA AATAGCAGAGGAGATTGCACGACTGAGGAGTGGAATTAATGCATTAACTGAGGCGAAGAAACACACAAAGGGTGCTGCAGCACAAATTCTAGATGCAATT GGCAAGTTGGAGTCCAATATGAACCGAAATCTTGAAAGGGCTGTTAAGGAGAATGATAGAGTTTACCTCATGAGAGTTCCTTCCCCTAATTCGTTACCTC CTCTTCCAGCATTTTCTATGGTGAAGTCAATGGCAATGAATGAGGTTTTAGATGCAAGCAAAGAGAAAATGTTTGCAAGTCTTGTTCCTGACAGCAGTGC AAAGGCCCTCTCCAGGTACACTGAAATGGTAGATGACATTATAAGAACACAGGCTGAGAAGTTGCAAGAAGCTAGTGAGCTAACACGAGTTAGGCTCAAG GAAATGGAACTGCCAGATTCTATTCTTGCTTTGGAAGGAAATTTTTCTCTGCCAACTCATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGTC CTGCCGGTTTGGATGCAGAGTTGCAGCAACTTAAGGATCTAAGGAGGGTGAATCAAGAATTGCTGGTCCAGATTGAGGAGTTGTTGCAGAAGGAAGCGAG AGAGGATTCTCAATTTAGGAGCCAATTCGGGACAAGATGGACTAGGCCACAATCAAGCACTTTGACGAAGACCTTGCAGGATAGGTTAAACAGGTTTGCA GGTAACTTGAAACAAGCTGCTGAAAGTGATGCTAGGATTGAGCGTTCAGTTAGAGAACATTCAGCACTCATGTTGATCCTTGATGCTCATCCGATTGAAT CTGCTCTTCCAACCTTGGCAAGACCAATTATGTCTTTTGATCAAAATGAAGATGCTGTTGTGGGGTCTCTCAAGCAGAGCTTGAGGCAACTAGAAAATTT GGGAGCTCAAAGGGCTGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGACATACTACCCAAGTTGATGACATTCACTGGTTCTCATGAGGAT CTTTTCAAAAAGGAGATTTCAAAATATGATCATATTTGTGAAGAAATAGCTCAAAATATTGAGGCACAAGAGCAGCTGTTGCTGCAGATCCAGGTATATC TGTGCTCCCATGTCATTTGAACTAATGCATATTAAGCATGGAAACGCATGTAAACTATCTAGTCCGACAACTTTTTTATCCTTTTTCTTTGTGTGTGTGT GCATGGGGGGATACTCATTTCTTTTATTACTGTGAACTACCTTCCCCTGTACAGTAGTTATTCACTTTGGCCTTTACTGTTGAGGTTCTTTTCCCTTATA GAAGCAAGGGTGTGCTGAGAGCATCCATTTTCTAGTTATTTTGTGGTCGCGAGTTTCTTCGTAGGTGATTACTTCTGATAGATGGTTCTCGAAACAATAA ATTCAATGATTCTGATAATGTTTGCCATTGTTCACAGGCTCAAAATGATGATTTCTCTGTTATCTTCAACCTTGAAGATTACAAAGTTTCATGTGAAAAA TCATACAAGCAGATTGAATCTGCTGTAGCAAAGTTTCAAGAAATAAAGGAGAACATCAACGAAGGGTTAAAATTCTATGTTACTCTGCAGGATGCAATCA CAAATGTAAAGCAGCAGAGTGACGACTTTGTAATGACAAGGAACATCCAGTGTAGGGAAATGATTGATGATGTTCAGAGACAAGTAGCTGGTCTGAGTTT CCAGGATAACAAAAACACAGGTGCTTTTAACAGCAACTACCCTTCAGTGGGAAACCAAAACCAAAGATCCAATGCACAACCAACAGAATCCCGTCCTCAA ACTCCTTATTATCAGTCAGCTGAGCAACCGCAAGTTCCTGCCTTTCCTCATCCCCCTCCCCCATATGGTCATCCACATCAGCCGCCACCTCCATACCACC TTCCATCAACATCATCTGCTCCATACCCACCTTCTCAAGTCCATCAGCAGCCACTGGCAAACCATGACTACGGCCAGCCTGCATATCCTGGGTGGCGTGG TCCATACTATAATAATGCACAGGCTCAACAACCTGGGTCTGCTCCTCGTCCTCCTTACACCGTTTCATCTCCATACCCTCCTCCTCACCAAAGTGGCTAC TATAGGCAGCAATAGTGTTCATAGAATCATATCCCCTAGGGTTGAAAATGCTAAGTGTTCATACAATCATGGTGTGAAAATGTTTTTGTTTCTTTGGGTT GTCATTGTACTTCTTTTTCTGATGGTTTGCATTATAATTGGATTGTGAATAAGTACAGCTTCTACAACAATGTTGCATGTATCGTTTGATGAACTATACT GTACGAGGGAAATTCTCCCAACTATAAATACTCACTCCAGGGAAGTTAAAGCAAGCACAACTAGATTTCCAAAGTTTTCTTTAGTGATTACATTATGTTC ATCCATAGTCACTAATTACAGGTCTGCTACCTTATATTTAAAGAGCTTTGATATAGTAGACATATTGATGTGA
• Tissue: pods
• Gene name: LI_gene_186783;
• Additional information: details;

Expression of Ll_transcript_409120

FPKM

• PAB: 0.8
• PNAB: 0
• PS1: 0.3
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409120

• Blastp: Vacuolar-sorting protein BRO1 from Arabidopsis with 77.59% of identity
• Blastx: Vacuolar-sorting protein BRO1 from Arabidopsis with 78.18% of identity
• Eggnog: Rhophilin, Rho GTPase binding protein(ENOG410XQX6)
• Kegg: Link to kegg annotations (AT1G15130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456175.1)
• Pfam: BRO1-like domain (PF03097.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;