Ll_transcript_409123

• Id Trinity: TRINITY_DN51674_c0_g1_i6
• Name Transcript: Ll_transcript_409123
• Sequence: CTTTTATCCATCTTTATATCCCGCGTGGCCGCGTCCCCTGTCCCTTCATCTTTATATCCAGCTTGCACATTCATGCATCTTGCCTTACATTGAAAATGGA GCGACAGGAAATAAACTCATCTAAAACCTGAGACTTGGAAGACTCAATATAGTCAAATCGTAAACAAGGAAATTTGAAGCATATTCAAAATGTGCTAATC TAATAATATTATAAGGTTCCATTAGAAAAAGACAGCTACGCATCAAAAGAGGATTCCTTACCATATGCAAAATAAATACCAATCTTAGTTTCATTGGTCT TTGTAATCTCCAGCTATTCACACGAAATTGAAAGAAAAAGGCACGTAACGTGACTATTCTAAGAGTGTACTATATAGCATGCAAATATAAGACACAAAAC AATTCCTCTACCATTTCTCTCTTTCTCTCAACCTTCCACCGATAATGGCTGCGTCGCCGTCACCATCCACGGCGGCCACCACCAACATCATGCTACCCAT CCACGAGAAGAAAACAAACCAAATTGATCTCTACCGTCCCCTCCGCTACTACATCGCCATCCACTACTCAGAACGCGAAGCTCAAAACCTCGAAGATGAT CTCCAAACCCTAAAACAACTCCGCTCCGATATCGAGCGAAACTCCGACCCTTCCCTCCACGCGCGCCGCGACCTCCTCCAATCCTATTACAGATCCCTCT GCCTCGTCGAAACCCGATTCCCAATCTCACCCGACCCGAACCACGTAAACACGTTAACGTTCACCTGGTTCGATTCGTTCAAACCGAAGAACAAATCATC TCAGCAGAACATTCACCTTGAGAAAGCCTCAGTGCTCTTCAATTTGGGTGCGGTTTATAGTCAAATTGGATTGTCATATGATCGGAACATGGTTGATGGT CGACGCCAGGCGTTGCACGCATTTATCGCGGCAGCGGGGTCGTTTGCTTACCTGAGGGAGAATGTGGCTTTGAAGGCATCGGGTGGAGGTTCTATCACTG CGGATTTGTCGGTAGAATGTGCGGGAATGTTGGAGAAGTTGATGTTGGCTCAGGCTCAGGAGTGTGTGTTTGAGAACACCATTGCCAAAGGGAGCACCCC CGGCGTTTGTTCTAAGATATCTAGGCAGGTAGGGCTGTACTATGAGGAAGCATTAGCTGCGCTGAATATTGCACCTTTAACCCAGCATTTTGATAAACCA TGGGTAGCTCATGTGCACTTAAAGGCAGCTCTATTCCACGCGGAAGCTTGTTATAGGTATGGATTAGAGCTACATGAAAAAGAAGAAATAGCAGAGGAGA TCACACGACTCCGGAGTGCTGTAAATGTGCTAAATGAGGCAAAGAAAAACTCAAGGGGTGCTGCAGCACAGATTCTAGATGCGATCAGCAAGTTACTGGC CAATATTAACAGAAACCTGGAGAGGGCTGTCAAGGAGAATGATAGAGTTTATCTCATGAGGATTCCATCTTTCACTTCCTTACCACCTCTTCCAGCATTT TCTATGGTGAAGCCAATGGTGATGAATGAAGTGCTAGATGCAAGCAAAGAGAAGATGTTTGCAAGTCTTGTTCCTGACAGCAGTACAAAGGCCCTCTCCA GATACACAGAAATGGTAGACAACGTTATAAGAACACAGACTGACAAGTTACAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAACTGCC AGATTCTATTCTTGCTTTGGAAGGAAAATTTTCTCTACCAACAAATCTCAAAGAAGATTTGGAAGCTGTGCAGGTCAGTGGGGGTCCTGCCGGTTTGGAC GCAGATTTGCATCAACTCAAGGACCTAAGGAGGGTGAATCACGAATTGATTATCCAGACTGAGGAGTTGTTGCAGAAGGAAGCAAGAGAGGATTCTCAAT CTAGAATCCAATTTGGATCAAAGTGGACTAGGCCACAATCAAGCACTTTGACGAAGACCTTGCAGGATAGGTTAAACAGGTTTGCAGGTAACTTGAAACA AGCTGCTGAAAGTGATGCTCGAATTGAGCGTTCAGTTAGAGAACATTCAGCACTCCTGTCAATCCTTGATGCCCGCCCAATTGAATCTGCTCTTCCAACC TTGGCAAGACCAATTATGTCTTTTGATCAAAATGAAGATGCTATTGTGGGCTCTCTCAAGCATAGCTTGAGGCAACTAGAAACTCTGGGAGCTGAAAGGG CTGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATACTGCCCAAGTTGATGACATTCTCTGGTTCTCATGAGGATCTTTTCAAAAAGGA GATATCGAAATATGATCATATTTGTGAAGAAATAGGTCAAAATATTGAGGCACAAGAGCAGTTGTTAGTGCACATCCAGGTTCAAAATCATGATTTCTCT GTTATCTTCAATCTTGACGATTACAAAGTTTCACGTGAAAAATCATACAAGCAGATTGAAGCTGCTATCACAATGTTTCGAGAAATAAAGGACAACATCA ACGAAGGGTTAAAATTCTATCGTACTCTGCAGGACGCAATCATAAATGTAAAGCAGCAGACCAATGACTTTGTAATGACAAGGAACATCCAGTGCAGGGA AATGCTTGAAGGAGTTCAGAGACAAGTAGCTGGTCTGAGTTTCCAGGATAACAAAAACACAGGTGCTTATAACAGCAACTACACTTCGATGGGAAATCAA AACCAAAGATCCAATGCACAACCAACCGATTCTCGCCCTCAAACACCTTATTATCAGTCATCTGAGCAGCCACCGGGTCCTGCGTATGTTCATCCCCCTT CCCCATATGGTCATGCCCATCAGCCTCCTCCATACAACATTCCATCAACGTCAACTATTCCATACTCACCTCCTCAGGCCCATCAACAGCCACCGGCAAA CCATGAATATGGCCAGCCGGCATATCCTGGTTGGCCTGCTCCACCATACTATAATAATACACAAACTCAACAGCCTGGGTCTGTTCCGCGTCCTCCTTAT ACCATTCCATCTCCATACCCTCCACCTCACCAAAGTGGCTTCTATAGGCAGCAATAGTGTTCATACAATCATATCCTCTAGGATATAGGTAATATTCTTT CTGTTGTCAGTATCTCTTGAAGAGTTGGGATTATCGAGCCATTTATCTTAAAGCCTTATCGGAGCGTGAAGCATTTTGTTTCCTTTGGTTGTCATTGTAC TTGTTTTTCTATTGATTTGCATTATAATTGGATTGTGAATAAGTTTAGCTTGTACAACAATGCTGTATGTAAAGTTTGATGATACATTAAAAGGAAATTA GACAAGCTCAGGAGCTAGATATTCTAAGTCTTTTTTTAGTGTTTACATTATGTTGATTGAATACGAACGTCTACTACTAAATTTAAAAGAGGTTTGATCA TGTAGACGTGTGGTTGATTAGTTTTAAGGTCAAAGTAAATCACAGTAATAATGCTAATCAAACTTTACTTGAAAAC
• Tissue: pods
• Gene name: LI_gene_186783;
• Additional information: details;

Expression of Ll_transcript_409123

FPKM

• PAB: 0.6
• PNAB: 1.9
• PS1: 5.3
• PS2: 2.1
• PS3: 2.9
• PW1: 11.4
• PW2: 4.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409123

• Blastp: Vacuolar-sorting protein BRO1 from Arabidopsis with 67.4% of identity
• Blastx: Vacuolar-sorting protein BRO1 from Arabidopsis with 71.95% of identity
• Eggnog: Rhophilin, Rho GTPase binding protein(ENOG410XQX6)
• Kegg: Link to kegg annotations (AT1G15130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428016.1)
• Pfam: BRO1-like domain (PF03097.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;