| Id Trinity | TRINITY_DN51682_c9_g2_i17 |
|---|---|
| Name Transcript | Ll_transcript_408968 |
| Sequence | TTTCCATTACCTGTCGGCACTTCACTCTCACCCTACGATCATATCACCCCCCCTTAATCAACGGTCATAAATAAACAACATTGTGCTCAGAAAGATTCAT CATTTCATCGTTACACCTTTAAATTCAAACCCACACCTACACCACTCTCTTTAACGAAACATAACATTTCTACACACACCTTCATTGTTTTTTCTGGTAT AACGTTGTTATCTCTGTCTCTTCATTCAAAGCTATGACGGAGCTCCAAACCAAACCTGAAACTGCTCCGGCTCCGACCACGGCTCCGGTGGTGGACCCTC AGCCTCTGGCTGAGGCTTTACCTCTTGCCGTCGTTGTTGATGAGAAAGCAGTGGTTCCAACGGCACCGGTGGTGCCGGTAGAGGAAACCAAGGCTCTTGT TGTTGTTGAGAAAGAGAAGATACTGGATCCTGTACCTGTGCATAAGAAAGGATCCCTTGATAGAGATATTGCTCTTGCAGAAGTAGAGAAAGAGAAAAAA TTGTCTTATGTAAAGGCATGGGAAGAAAGTGAAAAATCCAAGGCAGAGAATAAAGCTCAAAAGCAACTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGA AAGCAACTCTTGAAGCTGAGCTGAAAAAAATTGAGGTAATTCATAACCTGTTGTTAAGTTAATCATTTACATAATAGCATTGCTTTTCTATTATCCTAAC ATCATAATGCATGTTGGCACAACACTCAGAGAAGCACACCCTTTTTAAAGTTCTAAAGTCTAAACAATATAATAATTATTTCCAAGTTAGGATATAAGAT ACATCACAATATGATTCTGTTGACAGCCCAAAATATGTTGACTTTTTGAGCTAGCACATTCCTTTTTCTTCACTTTTCATTATTCTTACCGACATTTGGA ACTTTTATTCCAATTATGCTTTTAATTTTGTCAAATGGTATCAAATACGTAGAGCATCCCTAAGTTTAATCTTTTTATTGTTAAGAATATAATATGCTTT TACCAACTAAATAAGTAATTAAGTTAGGAAGGTACTAATACTTTAAAAAATGGTGGCACAGTACACGAGGTCCCATTAGTAGAGTATGAGGAGAGTAGAT GTAGTAATATTTTCAGTTGACAAATTTTTGCCATATCCTAAGATGTGTTGTACTATCTCTTTTTTTTGTTAAACATTACAAAATAGTGATTGTAAAGAAG GGCAGAATATGATTGCAGAACTTATAAATGAGTTCTCCACTGAGGACCCCTTTTCTTTTAGTCTCTTTCCATTCAAAAGATAGTTTAAAATCATGAACTG TGAAGATGGTTAAAAACAGATTTTACTGTGACCGGTAAATTACTAAATTGAATGCAGCAGTATTATAAGTGTTATATGTACAGCATTTTAGAACTTCTGG CTTAATTGAAAGTCAGCCCTATTCCTTAAGCCAAAAGTTGTTGCCTTTGTTCATTGTCACTTGGATTATAGCAGTTGCGGTGTGAATTATTCTATGATTA AAATATATTTTTGAATCTGATGTGGTACAATACAGCTTGATGCGGTTGTGTTGCGGCCTGATACGACCACATCATTATGACTTGGAATCACACTGTAATT GCGAGATATGATGTGATTGTGGTGCAATATTATGGCCGCATCAGGAGACGAAGTCTGCAATTTAAATAAGTGTTTTGTAGAAATATAATTTTTGAATTGA ATAAGGGAGATTCACATAAACATAGAAAAACGCTTTTATTTTACTACCATGTTTAACACTTGAGTCCTGAGCAGGAACAACTTGAGAAAAAGAAAGCCGA ATATGGTGAAAAAATGAAAAACAAGATAGCCTCGGTTCACAAAGTAGCAGAAGAGAAGAGGGCAATGGTTGAAGCCAAGCGTGGTGAAGAACTTCTCAAG GCAGAGGAATTGGCTGCAAAATTTCGTGCAACTGGAACCACTCCGAAGAAGCACATTGGATGCTTTTAAATGTCATAGCAATAGTCAAATATGTGTGTAT ATTAATTATTTCTTGTTTGTTTATTAGTGGTTTTTTTGTGTGTAAGAAAAGTTATCCAAAGAAAAAACATAAAGTTTGTGGCATACAGCTTGTAGAACAT TGGCTTAGTTGAAGTGTTCTATGATGTTTGCTTTTTTTTCCACAAGAGAGGCACTTTAAGTCTTAAGAATTGCGTAGAATTTCTATCTCTTCATTATTAA AAGGACCCTCTTTCTCTTTTTGGAAGATAAAGAATTCGATAGTTTAATGTTTTAATCATGAGAGCAAATCTTCTATTCAAGATAGTATCACTTCATGTAT T BLAST |
| Tissue | pods |
| Gene name | LI_gene_186856; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408968
| Blastp | Remorin from Solanum with 58.4% of identity |
|---|---|
| Blastx | Remorin from Solanum with 67.9% of identity |
| Eggnog | Remorin family(ENOG410YI71) |
| Kegg | Link to kegg annotations (102577743) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413951.1) |
| Pfam | Remorin, N-terminal region (PF03766.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |