Ll_transcript_408950

• Id Trinity: TRINITY_DN51682_c9_g2_i3
• Name Transcript: Ll_transcript_408950
• Sequence: CGTTCACTTTGCATTCTTTTTCTCAGATAACGTTGTTCTCTGTCTCTTCATTCAACCCAACCAAACTCCGAACCTATGACGGAGCTCCAAACCAACCATG AAACAGCTCCGGCAACGGCTCCGGTGGACCCTGACCCTCCTCTGACCGAGGCACCACCGGTTGCCGCCGCCGTTCATGAAAAGGCGGTGGCTCCACCACC ACCGGCACCTGTACCGGTAGAGGAAGCCAAAGCTCTTGCTATTGTTGAGAAAGAGAAGATACCAGATCCTGTACCTGTACATAAGAAGGGATCCCTTGAT AGAGATATTGCTCTTGCAGAAGTAGAGAAAGAGAAAAAATTGTCTTATGTAAAGGCATGGGAAGAAAGTGAAAAATCCAAGGCAGAGAATAAAGCTCAAA AGCAACTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGAAAGCAACTCTTGAAGCTGAGCTGAAAAAAATTGAGGTAATTCATAACCTGTTGTTAAGTTA ATCATTTACATAATAGCATTGCTTTTCTATTATCCTAACATCATAATGCATGTTGGCACAACACTCAGAGAAGCACACCCTTTTTAAAGTTCTAAAGTCT AAACAATATAATAATTATTTCCAAGTTAGGATATAAGATACATCACAATATGATTCTGTTGACAGCCCAAAATATGTTGACTTTTTGAGCTAGCACATTC CTTTTTCTTCACTTTTCATTATTCTTACCGACATTTGGAACTTTTATTCCAATTATGCTTTTAATTTTGTCAAATGGTATCAAATACGTAGAGCATCCCT AAGTTTAATCTTTTTATTGTTAAGAATATAATATGCTTTTACCAACTAAATAAGTAATTAAGTTAGGAAGGTACTAATACTTTAAAAAATGGTGGCACAG TACACGAGGTCCCATTAGTAGAGTATGAGGAGAGTAGATGTAGTAATATTTTCAGTTGACAAATTTTTGCCATATCCTAAGATGTGTTGTACTATCTCTT TTTTTTGTTAAACATTACAAAATAGTGATTGTAAAGAAGGGCAGAATATGATTGCAGAACTTATAAATGAGTTCTCCACTGAGGACCCCTTTTCTTTTAG TCTCTTTCCATTCAAAAGATAGTTTAAAATCATGAACTGTGAAGATGGTTAAAAACAGATTTTACTGTGACCGGTAAATTACTAAATTGAATGCAGCAGT ATTATAAGTGTTATATGTACAGCATTTTAGAACTTCTGGCTTAATTGAAAGTCAGCCCTATTCCTTAAGCCAAAAGTTGTTGCCTTTGTTCATTGTCACT TGGATTATAGCAGTTGCGGTGTGAATTATTCTATGATTAAAATATATTTTTGAATCTGATGTGGTACAATACAGCTTGATGCGGTTGTGTTGCGGCCTGA TACGACCACATCATTATGACTTGGAATCACACTGTAATTGCGAGATATGATGTGATTGTGGTGCAATATTATGGCCGCATCAGGAGACGAAGTCTGCAAT TTAAATAAGTGTTTTGTAGAAATATAATTTTTGAATTGAATAAGGGAGATTCACATAAACATAGAAAAACGCTTTTATTTTACTACCATGTTTAACACTT GAGTCCTGAGCAGGAACAACTTGAGAAAAAGAAAGCCGAATATGGTGAAAAAATGAAAAACAAGATAGCCTCGGTTCACAAAGTAGCAGAAGAGAAGAGG GCAATGGTTGAAGCCAAGCGTGGTGAAGAACTTCTCAAGGCAGAGGAATTGGCTGCAAAATTTCGTGCAACTGGAACCACTCCGAAGAAGCACATTGGAT GCTTTTAAGTGTCATAGCAATAATCAAAATTGTGTCTATATCATTTATTGTTTGGTTATCAATGTTGTTTTTGTGTGTAAGAAAAGTAATCCAAAGAAAA AAAACATAAAGTTTGTGGCATACAGCTTGTATATCTTTTGGCTTAGTTGAAGTGTTCTATGCTGTTTGTTTATTTTTTTATCAAGAGAATCTCACTCTTA ATCATGTATAGAGTTTCTCTCTCTTCATTATTAAAAGGGGACCAAGATCTGCTATCCCAAAACCTGTACCAAACCAATAATAACATGCCACACCATTCAA AAAAATTAAACATTCATATATTTATTTATTTTTTTCTTCATTTTGATTGGCTTGGTACATAGTTGTGGACATGTTTTGGGGCAAGCCTCTTCTCTTTTTG GATGATAAAG
• Tissue: pods
• Gene name: LI_gene_186856;
• Additional information: details;

Expression of Ll_transcript_408950

FPKM

• PAB: 3
• PNAB: 2.7
• PS1: 1.5
• PS2: 0
• PS3: 0.4
• PW1: 39.1
• PW2: 29.2
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408950

• Blastp: Remorin from Solanum with 57.26% of identity
• Blastx: Remorin from Solanum with 66.25% of identity
• Eggnog: Remorin family(ENOG410YI71)
• Kegg: Link to kegg annotations (102577743)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413951.1)
• Pfam: Remorin, N-terminal region (PF03766.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;