| Id Trinity | TRINITY_DN51685_c1_g2_i21 |
|---|---|
| Name Transcript | Ll_transcript_408436 |
| Sequence | CTCAAGAATGTGCGGTTCAACTCCCAAACAGCATTGAAAATACCTATTCTTTGAATTAATTATTACTTTTTCATAAGATGAGTCAAATGTTCCAATTGGT GAAGATATATTCTTTTTTAATAACTTTTCATATGTAAAAATTTCATTCATTTTCACCCATTTCAAAAAATATCTCTCCTTAAACCTCGTTCATGGACTAT TTTTTCTCTTTCAACATCACTCTTCACTATTTCAACCTCCACTTTTCATCATTTTCCCCCAAATTTTCATTCTTTCTCCGTTCTCTATGTTGATGTCTCT TTCTCCAAGCTAATTTAGCTTTTGGGTCTTCTTAATTTGTCGATATAACCAATTTTTCTACACTTTCTCTTAGATTCAGGAACTTAGTTGAGATGAAAGC TACTTTGATTTGAGGGTATGCAAACTATCTTAAGTGCAAAAGCAGATAGTGAATACTTGAATTCCCGAAAGACATGCTTTCAGCTTTTTTTCATCTGAAA TGAAGAACTTGCAGAACACAGACGAATTACAGTCATCAACTCAAGCTTCTAATGAGCCGAAGAGTGAACCACCAAACAATCACACAACAGATGCTCCTAC GACAGACTCAGGTTCCGCATCTGCCTCAAGCAACGATAGTAAAAAAGTTTCACGGCAGGATATTGAGCTTGTCCAAAATTTAATCGAAAGGTGCCTACAA TTATATATGAACAAAGATGAAGTGGTTAAAACACTACTAACTCGGGCAAAGATAGATCCTGGATTTACAACTCTAGTATGGCAGAAGTTGGAAGAAGAGA ATGCTAACTTCTTCAGGGCCTACTATATCAGACTAAAATTGAAAAAGCAAATACTTTTATTCAATCATTTGCTTGAGCATCAGTATTATTTGATGAAGTG TCCCATGCCCGCAAAGCTTCCATTGGCTCCAATACAGAATGGAGTCCATCCGATGCCTGTCAACAACCTACCAATGGGATACCCAGTGTTACAGCAGCAA CCCATGCCAGCAGCAGGTCAGCCTCATCATATTGACTCCATGGGTTGCAATATATCAATGGGTCACGTGGTTAATGGAGTCCCTGCACCTAGCAATTTTC ATCCCATTCGGATGAATTCTGGCAATGAGTGAGAACTTGTCTAACTATACATATTTTCTTTATGCTATTCATACGCCAGATTTTTTTTTTGCAAAGAAGA CTGTTTCTAGATGATCTTGTGGTTCAGAAGATATGATTTCATCAGTGAACTGTTTAGTAGTTCGACTCATCATGTGCTTCTAACTTTTGTTAAAATGATT CATGGTCATGCTGGTAGGTATTTTGATCTTTATGTTGTGATTTGCCACACAATATCCAGAAAAATATATATTTAAAATACATTTCGTGCAAACAATTATA TTTCGTGCAAAAATATATAGAATCCACTAATACAGCTGCTTTTGTCCTTGTTGAAGTATGCTGGTGGACCACAGTGCTCCTGATATGGCTCCTATCATTT CACCAAATAGTGGAATGTCATCCATGTCAGATATGCCAGTGAGTCCGACATCAGTAGCACCCAGTGGCCATTTCCCCTTCACTGCATCAGAAATACCAGG AATGGGGGCAGACGTATCAGCTCTTGATGCTGCATTTGCATCTGATGTGGTAAGTTCAGTAGGACTACAGCTTGCACCGGATGGCGGCAATGGCATTTCC AGATCGCTAGATCAAATTCCGTGGAATTTCAGCCTATCTGATCTAGCAGCAGATTTGCCAAACTTAGGAGATCTAGGAGCTCTGGGAAATTATCCTGGTT CACCATTTTTGCCATCTGATTCAGACATTTTACTTGAATCTCCAGATCAACATGATATAGGTAATGTTTTTGGTTTCAGGATATGAAATTACACACACAC ACACATATATCCTTGCAACCACCATATTCTACCGTTACTAACTAGAAGTGCGACCTAGTGCACGAGGCTCCCACCTAGGTAGATATGTATGCAGCCTTAT CTCGGCAAATGGATAGGCTATTATTTTTTATAGGTCCTAAATATTAATATTATTGATGAAATTGTAGTGACCCAACATTTACATCTACAATATATAGAAC ATTCAATATAACTGCTACAAAGCCTGGTTTAACAAAGATAGCTCTTTTTTTTTATTTCAGTGGATGACTTCTTTGTTAATTTAGAGCCCCCATGCTCCCA ATCAGATGAGGAGAAATCTTAAGTTAAGGTGAGGCAATGTGTGTTTCACACTGAAATTGTTAAGTTAGGAAAGATTAGGATATTAATATATGCCACCTAG CTTACATGGCATAAATGCTTACTATTACTTTAAGTGTAGGCTGATTGATCTATCTCATCAGCATGAAGATAGAACATGTGCATTGTTGCCAGTAACTGTA ATCTTTTGTATTCTTTTAAGATATGTTTTATCAGGATATAATTGCTTAGATCCTTTTCAGTGCCAAGGTTGATGTGATTTCTACTGCAACGTTTCACATT ATATATAATGAAGCAACACTTTATCCAATTTTACCCATGGAGTAGTATATTTACCCAATGTTAAAGGCTTTATATCTTTGCATCTAGTTAAACCTTGAAT TTAATCTCAGCACCCAGTATTAGCAATATATGCATGTGTATGCATTGAAAGGAGTTTAAATATTAAGTACCAGAATAAGAAGTCACTGGTATGTATCTCT CTAGCTGAGTTATTGCTTTTACATTTCCTTGTAAGGGTAAAAATATCATTATATTTGTATCTAAAAGATAAAAGTGTCACAATGCCATTTTTTTGCTTTT ACTTTTGATGCACGATCTTCCTTTACCCTTTTAACATTGGGTTCATATTGTACCTTATGCATTTTGTGTATAAAAACTGTTCAATTTGGAAATGCATAGA TATAGAAAGTCTATCATGATCTACCTTAAATCAATAATGTATTTGTCTAAAGAATGGTTGCACATAAATACTGATAATATTCTATCTCGAAACTAATTGT CAACAAGAGAAGTAGCGCAATAGATATTTAAACCATTCATGAAACAATGAGGTAGACAATATGAAAATTAGTTCCTCTATAAAAAAGATAGTAATAAGCA TGTTCCTTAATGAATCAAGGGTCACTGGTTATAACATGAACAATAGAATGAGAGGGAGGGTTGCGGCAAACTGGGCATGTTGTGTTCATGTGAAGCCACT TATCAATGCATTCAACATGAAAACAATGTTTACATTCAGGAATGCATCTGATTGTCTCTTTGGTTTTGTACTCTGATAAGCATATCCAGCATGATACATC ATTCGGTCCCGGAACCCGTTGACTCTCCCCAAGTACTAGTTTCTCAAAAGATTCAATGATAGATTCATCCAGACCTGTAGAACCAGTAATAGTAGTATGT TGTGGTCCTATTGCAGCTTGTGCAGAACTCTGGAAAGCAGCATCGGCTATTCTGACCTTGTAGCACATGCAGCATACTATGACAATAACACATAATGCAG CTGGTGCAACTATAGTTACTGTGATGGTTCTCAATGTTATCAGTCCACGTTGTGATCTGCCTGAAAATTGAAGACAATATATGAGATTATATACTTTTTT TTATAGGCAAATGTTAGTATTTGTTCCGGGTTCAGAGTCCTTTATTTTATTATTTGTATGGCTATGGAATCTGTAAGGGTGATAAATGGGACGATAAACT TCATCAATTGAAGCAAAGCAAGATAGTTGACAGATGCTACCAAATTTACTATGATTCAGCCAGAGAAGCAACATAAGAGAATGAGGAAGTAATATTAACT AAAGTTATGTTTGGTTTAATTGTATTAATATCTCTTTTGTTTCAAATTTCACATAAATCTCATTTCAGTTTTATGCTATTATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186875; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408436
| Blastp | - |
|---|---|
| Blastx | Putative RING-H2 finger protein ATL21A from Arabidopsis with 52.5% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429088.1) |
| Pfam | - |
| Rfam | - |
| GO | - |