Ll_transcript_408412

• Id Trinity: TRINITY_DN51685_c1_g4_i2
• Name Transcript: Ll_transcript_408412
• Sequence: ATGTAATTTGATATATAAAATAATATATGTAAATAATTTTGTTAATCATTTATTTATATATATATATATATATGATGAAAAATTCATATAATCTTTGATA ATAATCATTATTACAAGAGTGATATAAATAACTAGCCAAAATAATTGGAAAAGAAGATTAAATATTAATAGGTAAGTTATTAGAAGAAAATAGATTATAA AAAAGTTGTGATTACATTATAGACAATATGTGGTTTACCCTAAATATTGATGGAGTGAGGGGGTCCCACCGAGGCAGCAGTGGAGTTGTTATAAATGAAA TCCATCCGCGCCACGCGTCCCGTGAGATGCGTTTATGTGCTGGCTTGGCTTCTCACTGCTCATTCATTCATTCATATCTCGCACTCAAAGGAGAAAAGAA AAATGTGGAAGCTGAAGATAGCGGAGGGAGGGAGTCCATGGCTACGGACATTGAACAATCACGTTGGAAGACAAGTGTGGGAGTTCGATCCTGATCACGT TGGATCTCCACAACTACTCAATGATATTCAAACTGCTCGCACTCTTTTCCACAACAATCGCTTCTCCCACCCTCACAGCTCTGATCTCCTTATGCGCCTT CAGTTTGCAAAAGATAACCCTTTAAGAGGTGATCAAGTGTTGCCTAATGTTAAAGTTGAAGATATTGATGATGTAACTGAAGAGGCTGTCACAACAACCT TGAAAAGAGCCTTGAATTTCTATTCAACTCTCCAGAGTGACGATGGTCACTGGCCTGGTGATTACGGTGGTCCCATGTTTCTTATGCCTGGATTGATTAT TACTCTCTCTGTCACTGCTGCACTCAATGCTGTCTTAACCCAACATCATATCAAAGAGATGTGTCGCTATCTCTATAATCATCAGAATAAGGATGGTGGC TGGGGTTTGCATATTGAAGGTCCCAGCACCATGTTCGGCTCCGTATTGAATTACGTCACTTTGAGATTGCTTGGTCAGGGACCTAATGATGGACAAGGGG AAATGGAGAAGGCACGTGACTGGATTCTAAGCCATGGTGGTGCTACTAACATTACTTCATGGGGCAAGATGTGGCTTTCAGTGCTTGGAGTATTTGAATG GTCTGGAAATAATCCCTTGCCCCCCGAGATATGGCTCCTTCCATACATGCTTCCATTCCATCCAGGAAGGATGTGGTGTCACTGCCGAATGGTCTATTTG CCAATGTGCTACTTATATGGAAAGAGGTTTGTTGGTCCGATCACACCAACAATATTATCTCTCAGAAAAGAGCTTTATACTGTACCATATCATGATATAG ACTGGAATGAAGCTCGCAATTTGTGTGCTAAGGAGGACTTGTACTATCCTCACCCATTCGTGCAGGATGTTCTTTGGGCATCTCTACACAAGGTTGTTGA GCCTGTTTTGATGCATTGGCCTGGCAAAAAGTTGAGAGAAAAGGCTATTAAGGTTGCAATTGAGCATATTCATTATGAAGATGAGAATACTCGTTATATT TGCATAGGTCCTGTAAACAAGGTTTTAAACATGCTTTGCTGTTGGGTTGAAGATCCGAATTCAGAGGCCTTCAAGTTGCACCTTCCAAGAATCTACGATT ATCTATGGCTTGCTGAAGATGGCATGAAAATGCAGGGCTATAATGGAAGTCAACTATGGGATACTTCATTCGTTATCCAAGCATTTATTTCAACTAACCT CATTGAAGAATATGGCCCAACTCTAAGGAAAGCTCATATGTTCCTTAAGAATTCACAGGTTTTAGAAGATTGTCCAGGTGATCTTAATAGTTGGTATCGT CACATTTCAAAAGGCGCTTGGCCTTTTTCGACTGCAGATCACGGATGGCCGATTTCTGACTGCACAGCTGAAGGACTGAAAGCTGCTCTATCACTATCCA AAATTTCACCAGTGATTGTTGGTGAACCATTGGATGCAAAGCAATTTTATGATGCTGTTAATGTCATTCTCTCATTACAGAATACAGATGGAGGCTTTGC AACATATGAGCTCACACGATCTTATAGCTGGTTGGAGTTAATCAATCCTGCTGAAACTTTTGGTGACATCGTTATTGATTATCCTTACGTGGAATGTACC TCGGCAGCGATTCAAGCTTTGGCATCATTTCAGAAATTATATCCTGGGCATCGTCGAGAAGAAATAGCATGTTGTATTAAAAAAGCTGTTGCCTTTATTG AAAAAATACAAGCTTCAGATGGTTCATGGTATGGTTCTTGGGGGGTTTGCTTCACCTATGGCACTTGGTTTGGGATAAAAGGGCTGATCGCTGCTGGAAA GAGTTTCAGTAATTGCTCAAGCATCCGCCGAGGATGTGATTTTCTACTGTCTAAGCAGCTCCCCTCTGGTGGCTGGGGAGAAAGTTATCTGTCTTGTCAA AACAAGGTTAAGTTTGCTGTTTCTATTATCCATATCATATCACTAAATTCTGAAAAACCCAGAATCACTTCGCACTTCTTCATTTGTTATTCTTTGGAAC ATAATTTGTATGTGATCATTTCTCTGGAATGCATAAAAATGATTGCTAATATTCAAAGCACATTGATAGGAATGAGTTGGAGTGTTCTAAAGGATAGTTA CCTAAATCAAGAAATCAACATCTTTGCATCAATGATATTGCAAGAACATGAATCCGATAAAGAGTTCAACCAAACTATAAAATAAATAGAATAAGAGGAT TCAGCATTTCACAAAGCTTTTATTTTACATAGTAAGGGAAATGCAGTATCATCACAAATTTTCTGCACAAGGAACAAGTTTCATATATTTTCCCCAAGAG GGATGAAATAATGTATGTTAGCTGTTCTTCAGGTGTATTCAAATCTGGAAGGCAACAGGTCACATGCAGTAAACACCGCATGGGCTATGCTAGCTCTCAT TGGTGCTGAACAGGCCACGAGAGATCCAACACCATTGCACCGTGCAGCTGTATGTTTGATAAATTCCCAAATGGAGAATGGTGACTTTCCACAACAGGAA ATAATGGGAGTGTTCAACAAGAATTGCATGATAACTTATGCTGCATACAGAAACATATTCCCCATATGGGCTTTGGGAGAATATAGATGTCATGTGTTGC AGAAGCAGGCTTCCTCTTAATCTCAATCATTCCTATTCATCCTTCACTCTTAGAGAATGCTTATATAACTTCTTTTCTACTAGACTACTACTACTACTTC TTTTCTACTAGACTACTACTACTACTTCTTTTCCTTGGTTCGGATCATTGGTGAAATAAGTATGTAAACCGTGGATATGTTATGTTATTCACCCTTGTCA CCTCTATATCTAAATAGGACTCTTTATCTTTAAACACAAACTTTTTTCACTGTTTATCTAAAAGCACAACAAAATATTCTGATCCCAAAGCCTGTTATGG TACCAAGGCTTTAAATAAGCCAAGAGGAGTGTATTTAAATAGTAGAATATAAATATTAATATATGAATGATTAAGTAATTCGGCTTGTAAGGTTTAATAA GCCTTTTAAATATTTAAAGT
• Tissue: pods
• Gene name: LI_gene_186877;
• Additional information: details;

Expression of Ll_transcript_408412

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408412

• Blastp: Cycloartenol synthase from Glycyrrhiza with 86.1% of identity
• Blastx: Cycloartenol synthase from Glycyrrhiza with 86.1% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458558.1)
• Pfam: Squalene-hopene cyclase C-terminal domain (PF13243.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;