Ll_transcript_408423

• Id Trinity: TRINITY_DN51685_c1_g4_i6
• Name Transcript: Ll_transcript_408423
• Sequence: GCTGCTCTATCACTATCCAAAATTTCACCAGTGATTGTTGGTGAACCATTGGATGCAAAGCAATTTTATGATGCTGTTAATGTCATTCTCTCATTACAGG TAGCTAGACTCCTCATCAATAGTTTTCGGAAATTATGTCAAATCATGATAAACACACTGTTAGGGACCAGAAAATTCATTGAATATAAATGGAGTCTAGC TCCTTAGAATATGTTGTATACTTCCTCTTGGTTCAAGTGAAAAACAAAGAAAAGATAAAGAACACCTGCAGACTTGGACGGTCTGCCTTTCCCCTAGCCA AATGGCTCCAAACCTTTATTCAACAATTGCCTATCTCTCATTTTCTCCACGCCCACATAATTATGACACCTTTCTGATATTACCTTTATAAACTTGCCAC ATTGACAAGTTTGTTACAAATTTCTACTCCCATCCTCCCACCTTCCCCACGTGTAGCATAGGGTCTATCCCACACACGGCCTCACCTTTTCTATCATTTT GAAGTCTAATTGATTCTAATTGTAACTTCGGGTGATTATTAGTTTGATTCTTACAATCCTAATGAAGTATGTATTCTATATCTTCTATACTATAGTACCA TGATGGATGAGCTGGGCACCTAGTCATTTTGTAAAATCAATTAAATTTGCTTGGAAAATCAATGCAGTTATCCAAAGATGTGTTTTTTGTTTCCATCATT TCAGAATACAGATGGAGGCTTTGCAACATATGAGCTCACACGATCTTATAGCTGGTTGGAGGTATCCCTCTCATTATTTTGCCTATATTCGTTAGTTTAT AGTATATCTTCTTTGAAATGTGAAACACGTTATGGCATGTAGCAAATGTTTATCTTTCCATGGAAAGAACATAATGCATCCCTTGGTTTTTGTTTTTAGG TGCTTTTTGGTTATAAAGCTCTTCTTTGTATATAACACCTTCCTCATGAAGAATTGTAGATCCTTTGGTTTTTGTTTATAAAGCTCTTCAGATTTATGCC GCAAGAGTTACTATATATTGAATCATTGTTTTAGAATAAACCTTTTAGGGTTTCATTGGACTTTCCTTTACATTTTAGAATTAGGGGGTAATAGTTGATC CTGATAATTGTGGATATTCTTTATGGATTAATTTAATGATATACATACATATATTGATAATGCCTTCTATATTGTCAGTTAATCAATCCTGCTGAAACTT TTGGTGACATCGTTATTGATTATCCGTAAGCTATCAAATCCATATTTGTTTCTGTATCCCTCTTTCCATTCCCAAAATCCTACTGTTTTAACTTTTAATA TTTCCCTAATCTATGTTCTATAGTTACGTGGAATGTACCTCGGCAGCGATTCAAGCTTTGGCATCATTTCAGAAATTATATCCTGGGCATCGTCGAGAAG AAATAGCATGTTGTATTAAAAAAGCTGTTGCCTTTATTGAAAAAATACAAGCTTCAGATGGTTCATGGTTTGCTCCTCCCTCTTGGAAAACCACTTTTTT CATAAGCTTTTCTGTTGATTTGGTATATAAGGTGTTGAAGATATTTTTATATGTATACATGCATCTCAAGTTTTCTCTACCAAATTTTTTTGCTGCTTTT ACTTTTGCTTGTGTTTGGAATTGAACTTTCTCAGTTCAGTTGACTTCTAACCACTGAAACTGCTAAACAGGTATGGTTCTTGGGGGGTTTGCTTCACCTA TGGCACTTGGTTTGGGATAAAAGGGCTGATCGCTGCTGGAAAGAGTTTCAGTAATTGCTCAAGCATCCGCCGAGGATGTGATTTTCTACTGTCTAAGCAG CTCCCCTCTGGTGGCTGGGGAGAAAGTTATCTGTCTTGTCAAAACAAGGTTAAGTTTGCTGTTTCTATTATCCATATCATATCACTAAATTCTGAAAAAC CCAGAATCACTTCGCACTTCTTCATTTGTTATTCTTTGGAACATAATTTGTATGTGATCATTTCTCTGGAATGCATAAAAATGATTGCTAATATTCAAAG CACATTGATAGGAATGAGTTGGAGTGTTCTAAAGGATAGTTACCTAAATCAAGAAATCAACATCTTTGCATCAATGATATTGCAAGAACATGAATCCGAT AAAGAGTTCAACCAAACTATAAAATAAATAGAATAAGAGGATTCAGCATTTCACAAAGCTTTTATTTTACATAGTAAGGGAAATGCAGTATCATCACAAA TTTTCTGCACAAGGAACAAGTTTCATATATTTTCCCCAAGAGGGATGAAATAATGTATGTTAGCTGTTCTTCAGGTGTATTCAAATCTGGAAGGCAACAG GTCACATGCAGTAAACACCGCATGGGCTATGCTAGCTCTCATTGGTGCTGAACAGGCCACGAGAGATCCAACACCATTGCACCGTGCAGCTGTATGTTTG ATAAATTCCCAAATGGAGAATGGTGACTTTCCACAACAGGAAATAATGGGAGTGTTCAACAAGAATTGCATGATAACTTATGCTGCATACAGAAACATAT TCCCCATATGGGCTTTGGGAGAATATAGATGTCATGTGTTGCAGAAGCAGGCTTCCTCTTAATCTCAATCATTCCTATTCATCCTTCACTCTTAGAGAAT GCTTATATAACTTCTTTTCTACTAGACTACTACTACTACTTCTTTTCTACTAGACTACTACTACTACTTCTTTTCCTTGGTTCGGATCATTGGTGAAATA AGTATGTAAACCGTGGATATGTTATGTTATTCACCCTTGTCACCTCTATATCTAAATAGGACTCTTTATCTTTAAACACAAACTTTTTTCACTGTTTATC TAAAAGCACAACAAAATATTCTGATCCCAAAGCCTGTTATGGTACCAAGGCTTTAAATAAGCCAAGAGGAGTGTATTTAAATAGTAGAATATAAATATTA ATATATGAATGATTAAGTAATTCGGCTTGTAAGGTTTAATAAGCCTTTTAAATATTTAAAGT
• Tissue: pods
• Gene name: LI_gene_186877;
• Additional information: details;

Expression of Ll_transcript_408423

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0
• PS2: 0.2
• PS3: 0.5
• PW1: 0.3
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408423

• Blastp: Cycloartenol synthase from Glycyrrhiza with 87.1% of identity
• Blastx: Cycloartenol synthase from Glycyrrhiza with 87.1% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458558.1)
• Pfam: Squalene-hopene cyclase C-terminal domain (PF13243.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;