| Id Trinity | TRINITY_DN51685_c1_g4_i8 |
|---|---|
| Name Transcript | Ll_transcript_408434 |
| Sequence | GCTGCTCTATCACTATCCAAAATTTCACCAGTGATTGTTGGTGAACCATTGGATGCAAAGCAATTTTATGATGCTGTTAATGTCATTCTCTCATTACAGG TAGCTAGACTCCTCATCAATAGTTTTCGGAAATTATGTCAAATCATGATAAACACACTGTTAGGGACCAGAAAATTCATTGAATATAAATGGAGTCTAGC TCCTTAGAATATGTTGTATACTTCCTCTTGGTTCAAGTGAAAAACAAAGAAAAGATAAAGAACACCTGCAGACTTGGACGGTCTGCCTTTCCCCTAGCCA AATGGCTCCAAACCTTTATTCAACAATTGCCTATCTCTCATTTTCTCCACGCCCACATAATTATGACACCTTTCTGATATTACCTTTATAAACTTGCCAC ATTGACAAGTTTGTTACAAATTTCTACTCCCATCCTCCCACCTTCCCCACGTGTAGCATAGGGTCTATCCCACACACGGCCTCACCTTTTCTATCATTTT GAAGTCTAATTGATTCTAATTGTAACTTCGGGTGATTATTAGTTTGATTCTTACAATCCTAATGAAGTATGTATTCTATATCTTCTATACTATAGTACCA TGATGGATGAGCTGGGCACCTAGTCATTTTGTAAAATCAATTAAATTTGCTTGGAAAATCAATGCAGTTATCCAAAGATGTGTTTTTTGTTTCCATCATT TCAGAATACAGATGGAGGCTTTGCAACATATGAGCTCACACGATCTTATAGCTGGTTGGAGGTATCCCTCTCATTATTTTGCCTATATTCGTTAGTTTAT AGTATATCTTCTTTGAAATGTGAAACACGTTATGGCATGTAGCAAATGTTTATCTTTCCATGGAAAGAACATAATGCATCCCTTGGTTTTTGTTTTTAGG TGCTTTTTGGTTATAAAGCTCTTCTTTGTATATAACACCTTCCTCATGAAGAATTGTAGATCCTTTGGTTTTTGTTTATAAAGCTCTTCAGATTTATGCC GCAAGAGTTACTATATATTGAATCATTGTTTTAGAATAAACCTTTTAGGGTTTCATTGGACTTTCCTTTACATTTTAGAATTAGGGGGTAATAGTTGATC CTGATAATTGTGGATATTCTTTATGGATTAATTTAATGATATACATACATATATTGATAATGCCTTCTATATTGTCAGTTAATCAATCCTGCTGAAACTT TTGGTGACATCGTTATTGATTATCCGTAAGCTATCAAATCCATATTTGTTTCTGTATCCCTCTTTCCATTCCCAAAATCCTACTGTTTTAACTTTTAATA TTTCCCTAATCTATGTTCTATAGTTACGTGGAATGTACCTCGGCAGCGATTCAAGCTTTGGCATCATTTCAGAAATTATATCCTGGGCATCGTCGAGAAG AAATAGCATGTTGTATTAAAAAAGCTGTTGCCTTTATTGAAAAAATACAAGCTTCAGATGGTTCATGGTTTGCTCCTCCCTCTTGGAAAACCACTTTTTT CATAAGCTTTTCTGTTGATTTGGTATATAAGGTGTTGAAGATATTTTTATATGTATACATGCATCTCAAGTTTTCTCTACCAAATTTTTTTGCTGCTTTT ACTTTTGCTTGTGTTTGGAATTGAACTTTCTCAGTTCAGTTGACTTCTAACCACTGAAACTGCTAAACAGGTATGGTTCTTGGGGGGTTTGCTTCACCTA TGGCACTTGGTTTGGGATAAAAGGGCTGATCGCTGCTGGAAAGAGTTTCAGTAATTGCTCAAGCATCCGCCGAGGATGTGATTTTCTACTGTCTAAGCAG CTCCCCTCTGGTGGCTGGGGAGAAAGTTATCTGTCTTGTCAAAACAAGGTGTATTCAAATCTGGAAGGCAACAGGTCACATGCAGTAAACACCGCATGGG CTATGCTAGCTCTCATTGGTGCTGAACAGGCCACGAGAGATCCAACACCATTGCACCGTGCAGCTGTATGTTTGATAAATTCCCAAATGGAGAATGGTGA CTTTCCACAACAGGAAATAATGGGAGTGTTCAACAAGAATTGCATGATAACTTATGCTGCATACAGAAACATATTCCCCATATGGGCTTTGGGAGAATAT AGATGTCATGTGTTGCAGAAGCAGGCTTCCTCTTAATCTCAATCATTCCTATTCATCCTTCACTCTTAGAGAATGCTTATATAACTTCTTTTCTACTAGA CTACTACTACTACTTCTTTTCTACTAGACTACTACTACTACTTCTTTTCCTTGGTTCGGATCATTGGTGAAATAAGTATGTAAACCGTGGATATGTTATG TTATTCACCCTTGTCACCTCTATATCTAAATAGGACTCTTTATCTTTAAACACAAACTTTTTTCACTGTTTATCTAAAAGCACAACAAAATATTCTGATC CCAAAGCCTGTTATGGTACCAAGGCTTTAAATAAGCCAAGAGGAGTGTATTTAAATAGTAGAATATAAATATTAATATATGAATGATTAAGTAATTCGGC TTGTAAGGTTTAATAAGCCTTTTAAATATTTAAAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186877; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408434
| Blastp | Cycloartenol synthase from Glycyrrhiza with 75% of identity |
|---|---|
| Blastx | Cycloartenol synthase from Glycyrrhiza with 89.4% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003610947.1) |
| Pfam | Prenyltransferase and squalene oxidase repeat (PF00432.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |