Ll_transcript_296283

• Id Trinity: TRINITY_DN51700_c0_g1_i10
• Name Transcript: Ll_transcript_296283
• Sequence: TTATGACTTACTCTGTAGAATATGAAAAGTTACATAAGAACTGTGAGTCTATGAGTGTTGCGACAAAAGTGGAAACATGAAAAAAGAAATAATGTGAGGT ATATGGTTCAGTTACTACACCGTTGTTCGTTGCTCCCCAAATTCATACTTGTCATTTGATACAAACTGAATCCCCATGCCTCGCCGCAGTAAGTGGCAAC GGAACCCGCCACCCACCGTCAAAACCATTCAGGTGGCTACTGTTCAGAACAGTGACGGTTCGTGTTCGGAAGAAGGGCCAGAAACTACTGAAGATGATTC AGGAGTAAGTGATTATTCCGATCAAACTAAAGTTGGTAGAAAGAACCCATTTAGAAAGAGCAATGATGAGAGTTTGAAGAATTATGAGTCCAAACATAAC CTTGAAGGAAATAAAGATGGGTTTTTGATTAAGAAACGTGGTAGAAAAAGAAAAACCCTTTACAAATGTGAAGCTAGTGATTCAAAGGTAGAAGATCAAG CTAATGGGGAATCTCAAAACCCTTCAGAAAGCACCTTTCAGAGACGTAGCTTAAGAAATCTTCCTGGACCAAGTAATAAACAGGATATGCCAAAAATGAA GAGAGGTGTTAAATTTACAGAAGAAAAATGCCTAATGTGCCATCAATGTCAGAGAAACGATAAAGGCGATGTTGTGAGGTGTAAACGTTGTAAGAGTAAA AGATATTGCTTGTTCTGCTTGAAAAGTTGGTATCCTGAATGGAAACATGATGATGTTACTGAGGCATGCCCTGTGTGCCGTGGTAATTGCAATTGCAAAG CATGCATGCGGTCTTTTGCACATATTAAGAAAATGAAGAGAGATGTGGCAAATAAGAGGTATGAAGGTAACGAAGCTGATCTCTCTAAGTATGTACTGAT ACGTCTCATTCCATATGTAAGACGATTGAATGAAGAACAGATGATTGAGTTGGGGATAGAAGCTAAGAGACAAGGACTCTCAATCTCAGAGCTTAATATT GAAAAGGCAGAATACTCACTGATGAAACATGTCTACTGGTTGGGATGTGTTTGATTTCTTTTGTTTTTTCAGTTATACTCATATTATTTAGTTGCTGACT TAATGCTGTTTTGTAGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTAGAAAATGTTCTTTTCACCTTTGTCTCACCTGTTGCCATGA GCTTCGTGACGGGCAGCTTCTAGGTGGTCCAGATCCAGTTGAGTTGGAGTTCATCAATTGTAGTCTCGAGTATTTGTGTGGTGGAAAAGAAAAGGAACAG GTAAAAATGAAACGCACCCGTGTTGATGCTAAGCCTGAGATACACAAATCACCTGCTGGTGCTGAGCCTGACATTCGTGGATGGTCCAGATCTGGGTGGC ATGCAGAAAGTGATGGTAGGATTCCCTGTCCAAAGATGAATGATGAATGCTGCCATGGTCTTCTTGAATTGAAAAGCATATTTGGCCAGCCTTTTATTTC AGAGTTAGTATATAAAGCAGAAGAGCTAGCAAAAGCATATAAGCTTCAAAATGTAATCGAGACTCCTGACAACTCGTGTTCTTGTCCGAAGATCAATAAA AACACAGATGTTATAAATAATATGAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGACAACTGGTTATACTGTCCTAGGGCTGTTGATTTACAACCTGTGG ATTTAAAGCATTTTCAATGGCATTGGAACAATGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGTTGGGAACCACTAGTAAT GTGGCGTGCTTTCCGTCAAATAACTAATACCAAGCATGGTCAACACTTGGATGTGAAAGTCTTGGATTGCTTAGATTGGTGTGAGGGAGAGATCAACATC CATCAATTCTTTACAGGGTATACAGAGGGCCGGTATGATTGGTGTGATTGGCCTCAGATACTGAAATTGAAAGATTGGCCCCCTTCTAATTTATTTGAGG AACGTTTACCTCGCCATTGTGCTGAGTTCATATCTTCCTTGCCCTACAAAGAATATACAGATCCTCTCAGAGGTGCTCTCAACCTTGCTGTGAAGTTACC TACTGGCTGTCTGAAGCCAGACATGGGACCAAAGACATATATTGCTTATGGAGTTGCTCAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTTCACTGT GATATGTCTGATGCAGTAAATGTATTGACTCATATTGCCGATGTGGAATTGAAGCATAAAAGTATCCTTGCCATTGATAAATTGAAGCTAAAGCATCTTG AACAAGACAAGAGGGAGCTATTTCGAGATGATCAGGAGGGAGAAACTAATGTTGGGATGCCTACTAGTTCATCCTCTACTGTAGATTGTCTTTCAAATGG GTCAGAGTTGGAAGATGTTGAGAAAGTCAAAATGAAACATGAAAACATTATGTCAATTGGGGATGATGCTTCAGATGGTGCTCTATGGGATATTTTTCGG AGGCAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTTAGAGAGTTTAGGCATGTGCACTGCCGTCCTTTAAATCAGGTTATTCACCCCATCC ATGACCAAACCATGTATCTGACGGAGGAGCATAAGAAGAAGCTAAAGGAGGAGTATGGGATTGAACCATGGACTTTTATTCAGAAGCTAGGAGATGCTGT TTTTATTCCCACTGGCTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATTAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTTTC CACTTGACAGAGGAATTCCGCACACTCCCGATAAATCACAAATCTTCCGAGGACAAATTGGAGGTGAAGAAAATGACAGTGTATGCTATGGATACTGTGG TTAAAAACTTGGAGAAAACAAGGTCTGGGGAAACCTAGGTTTCCAAGGTAAATGTATCCATAACATATTGAAGCTGATTTGAAGTGTTTTTTTGAGCCAT TATATTGATGAGGTGTGATAATCTTAGATTATGTAATGCCCTAACTGTAGAACAGCTTTTTATTTTGTTTTCTGTAACACTGTTGTATGATGTACTTTTT AAACATCACATTACTGACATGTAATGGTGTGCATATATGTATCACCAGTGGTATATCTTGCATTTTTATGCTTAATCAAGTTTACGGTCAGATGCTAATG TGAGCATCATACTTTTAGAACTTCAGAGTGCTTAGATAATGAGATCTCTTAAGTTGCCCTTGTTTAATTATATTTTGCAAAATTTGGTGTTGATGTTGAT GTCATGACCTATATAGTTTCTGCCACTAAAACTTTCTGAATGAG
• Tissue: pods
• Gene name: LI_gene_186999;
• Additional information: details;

Expression of Ll_transcript_296283

FPKM

• PAB: 0.3
• PNAB: 2.3
• PS1: 3.8
• PS2: 1.6
• PS3: 1.4
• PW1: 1.3
• PW2: 1.5
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296283

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 50.31% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 46.63% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: Link to cantataDB annotations (CNT0001036)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427793.1)
• Pfam: JmjC domain, hydroxylase (PF02373.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;