Id Trinity | TRINITY_DN51700_c0_g1_i12 |
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Name Transcript | Ll_transcript_296285 |
Sequence | TTATGACTTACTCTGTAGAATATGAAAAGTTACATAAGAACTGTGAGTCTATGAGTGTTGCGACAAAAGTGGAAACATGAAAAAAGAAATAATGTGAGGT ATATGGTTCAGTTACTACACCGTTGTTCGTTGCTCCCCAAATTCATACTTGTCATTTGATACAAACTGAATCCCCATGCCTCGCCGCAGTAAGTGGCAAC GGAACCCGCCACCCACCGTCAAAACCATTCAGGTGGCTACTGTTCAGAACAGTGACGGTTCGTGTTCGGAAGAAGGGCCAGAAACTACTGAAGATGATTC AGGAGTAAGTGATTATTCCGATCAAACTAAAGTTGGTAGAAAGAACCCATTTAGAAAGAGCAATGATGAGAGTTTGAAGAATTATGAGTCCAAACATAAC CTTGAAGGAAATAAAGATGGGTTTTTGATTAAGAAACGTGGTAGAAAAAGAAAAACCCTTTACAAATGTGAAGCTAGTGATTCAAAGGTAGAAGATCAAG CTAATGGGGAATCTCAAAACCCTTCAGAAAGCACCTTTCAGAGACGTAGCTTAAGAAATCTTCCTGGACCAAGTAATAAACAGGATATGCCAAAAATGAA GAGAGGTGTTAAATTTACAGAAGAAAAATGCCTAATGTGCCATCAATGTCAGAGAAACGATAAAGGCGATGTTGTGAGGTGTAAACGTTGTAAGAGTAAA AGATATTGCTTGTTCTGCTTGAAAAGTTGGTATCCTGAATGGAAACATGATGATGTTACTGAGGCATGCCCTGTGTGCCGTGGTAATTGCAATTGCAAAG CATGCATGCGGTCTTTTGCACATATTAAGAAAATGAAGAGAGATGTGGCAAATAAGAGGTATGAAGGTAACGAAGCTGATCTCTCTAAGTATGTACTGAT ACGTCTCATTCCATATGTAAGACGATTGAATGAAGAACAGATGATTGAGTTGGGGATAGAAGCTAAGAGACAAGGACTCTCAATCTCAGAGCTTAATATT GAAAAGGCAGAATACTCACTGATGAAACATGTCTACTGGTTGGGATGTGTTTGATTTCTTTTGTTTTTTCAGTTATACTCATATTATTTAGTTGCTGACT TAATGCTGTTTTGTAGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTAGAAAATGTTCTTTTCACCTTTGTCTCACCTGTTGCCATGA GCTTCGTGACGGGCAGCTTCTAGGTGGTCCAGATCCAGTTGAGTTGGAGTTCATCAATTGTAGTCTCGAGTATTTGTGTGGTGGAAAAGAAAAGGAACAG GTAAAAATGAAACGCACCCGTGTTGATGCTAAGCCTGAGATACACAAATCACCTGCTGGTGCTGAGCCTGACATTCGTGGATGGTCCAGATCTGGGTGGC ATGCAGAAAGTGATGGTAGGATTCCCTGTCCAAAGATGAATGATGAATGCTGCCATGGTCTTCTTGAATTGAAAAGCATATTTGGCCAGCCTTTTATTTC AGAGTTAGTATATAAAGCAGAAGAACTAGCAAAAGCATATACACTTCAAAATGCAATCGAAACTCCTGACAACTTGTGTTCTTGTCTGAAGATCAGTAGA AACACATATGTTAGAAATAATATAAGGAAGGTAGCTTCTCGTGAAGTTTCCAGTGACAACTGGTTATACTGTCCTAGGGCTGTGGATTTACGACCGGTTG ATTTAAAGCATTTTCAATGCCATTGGAATAAAGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAGTGTACATCAGGTTTAAGCTGGGAGCCACTAGTGAT GTGGCGTGCATTCCGTCAAATTAGTAATACCAAGCATGGTCAACATTTGGACGTGAAGGTCTTGGATTGCTTAGATTGGTGCGAGGTTGGTTTACTATCT CAATGTTTAACTAAAGGGGTGTAATTAATTGTTTGCCTTCATTCATTTGAAGTTTATTTATAATTTATTTAATGTCTACTATTTCTTTTTACTGCAACTA CTTTGGTTGAAAGTGGCAAAAATAGAATAATTTATTCGCTGAAAACAAAATTGTATAGTGTCAAGTATTCTACATTTTTTGAATTTGATAATGTTGTCTT TCTGGATTGAGGGAGGTTGCTGAGCGTTTGATAATCTCAATTTTTCAAATACGTAGCAAACATCAGTATTGAATGCCCCACACCAGGAGAGAATTTGCAA AGCACATATTAGTTATAAATTTTGTTGTTGACTGTTGATAGTTCAATGTTAGAGATCATTTTCTGAGTGAGTGTAATTGGTCCATGTTACAATCTTGTAG TAATAGTCGTGCGCAGTATACTGTCTATTCTATTGTAACATTGTCAACCGTATGAGTATTGCTTGATCAAGTTGTGTCATTATTGTTGTCAGCTGCCTAT GACTATCGGGTCACACTCTGTATGTTAACATCTTATGTTAAATATTATCTGAATTTCATTCTTCTCGTCGTCCTTGCCTGTTTCTATTTTTCCTTGTACA ATATGGATATTTTCTTGTAACCCTTGCATCCTCTGCTTTCTATTATAATATTGGTATGTTTGCCTGCTTCTGAGGCATACTATGCTTGTAGCTGAATTCA GAAGAATTTTGGGTAGAAATATTATTGTTTTTCCAGTCCCCCCCCCCAAATCAGACTCAAGTAAATATTTTTTTTACCAATACTTTGCTGCTTTTAATTA ACATGTGTACTAAGTTGATTACACGCAGAAAGAGATCAATATCCACCAATTCTTTATTGGGTATACAAATGGTCGTTATGATTGGGTTAAGTGGCCTCAG ATACTGAAATTGAAAGATTGGCCTCCGTCTAATTTATTTGAGGAACGTTTACCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCCTTTAAAGGATATA CAGATCCTCTCGGAGGTGCTCTTAACCTCGCTGCTCTTAACCCCTCTTCTCTTCCATGTGCAAAGGCAGACATGGGGCCAAAGACATGTATTGCTTATGG AGTTAGTCAGGAGCTTGGACGTGGTGACTCTGTGACTAAGCTTCACTGTGACATGTCTGATGCAGTAAATGTGTTGATTCATATTGCCAATGTGGAATTG GTGCATAGTAGTCTCACTGCCATTGATAAGTTGAAGCTAAAACACCTCGAGCAAGACAAGAGGGAGCTACTTCGAGATGATCAGGAGGGAGAAGGTAGTG ATGGGGTGCGTAGTAGTTCATCCTCTACTGTAGATGGTCTTTCATATGGGTCAGAGTTGAAAGACGATGAGAAAGTCAAAACGAAGCAAGAAAACAGTAT GTTCAACGGGAAGGATGCTTCAGATGGTGCTCTCTGGGATATTTTTCGAAGACAGGATGTACCTAAATTGCAGGAATATCTAAAGAAGCATTTTAGAGAG TTTAGGCATGTGCACTGCCGTCCTTTAAATCAGGTTATTCACCCCATCCATGACCAAACCATGTATCTGACGGAGGAGCATAAGAAGAAGCTAAAGGAGG AGTATGGGATTGAACCATGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTTATTCCCACTGGCTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCAT TAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTTTCCACTTGACAGAGGAATTCCGCACACTCCCGATAAATCACAAATCTTCCGAG GACAAATTGGAGGTGAAGAAAATGACAGTGTATGCTATGGATACTGTGGTTAAAAACTTGGAGAAAACAAGGTCTGGGGAAACCTAGGTTTCCAAGGTAA ATGTATCCATAACATATTGAAGCTGATTTGAAGTGTTTTTTTGAGCCATTATATTGATGAGGTGTGATAATCTTAGATTATGTAATGCCCTAACTGTAGA ACAGCTTTTTATTTTGTTTTCTGTAACACTGTTGTATGATGTACTTTTTAAACATCACATTACTGACATGTAATGGTGTGCATATATGTATCACCAGTGG TATATCTTGCATTTTTATGCTTAATCAAGTTTACGGTCAGATGCTAATGTGAGCATCATACTTTTAGAACTTCAGAGTGCTTAGATAATGAGATCTCTTA AGTTGCCCTTGTTTAATTATATTTTGCAAAATTTGGTGTTGATGTTGATGTCATGACCTATATAGTTTCTGCCACTAAAACTTTCTGAATGAG BLAST |
Tissue | pods |
Gene name | LI_gene_186999; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296285
Blastp | Lysine-specific demethylase JMJ25 from Arabidopsis with 55.51% of identity |
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Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 52.46% of identity |
Eggnog | lysine (K)-specific demethylase(ENOG410XTAA) |
Kegg | Link to kegg annotations (AT3G07610) |
CantataDB | Link to cantataDB annotations (CNT0001036) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441694.1) |
Pfam | JmjC domain, hydroxylase (PF02373.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |