Ll_transcript_295856

• Id Trinity: TRINITY_DN51702_c0_g1_i18
• Name Transcript: Ll_transcript_295856
• Sequence: AATTAAGACATTGAAATTTTTTAATATAACTACACTGATGCACTTCAAGTTACATTATAATTTTATCATTAAAATACATTAAGTTACCACAGAGGGAGAG GAGTCTGACTCGTTTTTTTTGTGGACACAAGACAACCCGCGAAAATCCCCGACCAATCAAAGCCCACAAAAACCTTGGAAGCTCATCCTCATTTCGCCAC GTGTTCTTATCTCACTGTCTCTTTCAACCTTCAACGCCATGAATGAATGAATACTAACTAGGGTTTCACCTTCTCCTTCTCTCTCTTCACTCCTTCATTC AATGGCTTCCCTTTCTCTCTCCTTACCCGACCTCTATTTTCTCTCTCCTCTCAACCACCGCGTTTCTCTCTCCAAACCCCCCTCACGCAATTCCGTTTCT CGCAACCCAACACAGTACTGCGGTGTCACACTTCGCACGCGAGTCCGTGCTGTGAAGGAAGAGGGAGCGGTGGTTGAAGAAAGAGTGAATGATGTGAAGT GGAGTGGGAATGGATTTGCTGGTTCAAGTGGTGGAAGTAATGGGTCAGTGAAGAGGAGTAGATTGGTGGTGAAGGAGAGTGAGTTGGTGAAGTATGTGAA TGGGAACGGTGTTGCGGCGGCGAAGGGAGTTGAAGTGGAAGGTAATGCTGAAGATGGGAGGAAGAAGAGAGTGGAGGAGATTGGGAAAGAAGATGCGTGG TTCAAACAATCTGGGGAGTCACAAGTTGAGGTAGCAGCTGCACCTGGTGGTCGCTGGAGCAGATTCAAGACTTACTCAACTATCCAGAGAACATTGGAAA TTTGGGGATTTGTTGTAACGTTTATCTTTAAGTCGTGGTTGAATAATCAAAAGTTTTCATATAGAGGAGGAATGACTGAGGAAAAGAAAACCTTACGGCG AAAGATCCTTGCGAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCTACATTCATCAAAATTGGCCAGCAATTCTCTACGAGGGTTGACATTCTTCCC CAAGAATATGTTGACCAGCTGTCAGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACTGCTGTAGCTATTATTGAAGAGGAGCTTGGATCTCCTA TAGATGGCATCTTTGATCAGTTTGACTACGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCACCGTGCGAAGTTAAAGGGACAGGATGTTGTTGTTAA AGTGCAAAGGCCTGGTCTCAAGGGTCTTTTTGATATCGATCTTAAAAACCTAAGGGTTATTGCTGAATATCTTCAAAAAGTAGATCCTAAATCAGACGGT GCAAAGAGGGATTGGGTTGCTATTTATGATGAGTGTGCCTCTGTTTTATACCAGGTGACGATATTCTGGAAAATTGCTGCAGTCTTAGTTTATTTAAGAT CAACCGAAGAAAGTCATGTCTAGCTCATATCTTTATTGGTGTAATTTTGTTTTAATGAATTCAAGCTATAAGATTGCGTAGGAAGACTACTACTTTGGAG TATGATTTAAGTTTGGATGCATGGGATGGGTCTATCGCCTGGCTCTGCTCTTTGAAATTGCACATGTGCAAACCAAGGAAGTTCCTCTAGGTCATGGGAG ACTTTTATAACAAAGCTCTAGTAAATACTTTTGAAGGTTACTTGAGAAGCTCCTTAATCACACAAAAGGACATAACGAACGGCGTTACTTCAGTTGTTTT GACAGAAGGGATAGAGTGCCCTGCAATTTATCTGGCTAGATAATGGTGTAAAATGGAAGAAAATGAATTATGATGTGTAGGCGTAGAGGCATGCTCTTTG AGTCTTTCATACTTCATCAGTTGTTTTCTAAAACAAAGAATGATATTATTACTTTGGAAGGGTTAGAGCATATATGATGCATTAATAAAGGGATTCTTGT AGCAATTATTGCAACGGTTGGGAGGGTCGAGTTCTGGATCTTGTTCTTGTTTCCATATGATGTTTGCATGTGTTTTCTGCACAACTCTATTTAACTTGAA TTAACTATTTTCAGGAGATTGATTATACCAAGGAAGCTACTAATGCAGAACTATTCGCGAGTAACTTTAAAAACATGAGTTATGTGAAAGTCCCTTCAAT CGTATGGGATTATACCACACCACAGATTCTAACGATGGAGTATGTTCCCGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGC ACAAGGTTAGGGCGATATGCTGTCGAGTCTTACTTGGAGCAGATTCTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATG ATGTCAATGGTGGAAGATTGATCTTTTACGATTTTGGTATGATGGGAAGTATCAGTCAAAACGTCCGAGAAGGTTTACTTGAAACTTTTTATGGAGTTTA TGAGAAGGATGCAGACAAGGTCCTTCAAGCAATGATTCAAATGGGTGTTCTTGTCCCAACTGGAGATATGACTGCTGTTAGACGGACAGCACAGTTCTTT CTCAATAGTTTTGAAGAGCGTTTGGCTGCACAAAGGAAGGAGAGAGAGCTGGCTAAAGCCGAACTTGGGTTCAAAAAGCCATTAAGCAAGGAGGAAAAAA TAACGAAGAAGAAAGAACGTCTAGCTGCTATTGGTGAAGATTTACTATCCATTGCAGCAGACCAGCCCTTCCGGTTCCCTGCTACATTCACATTTGTTGT TAGATCCTTCTCAGTGTTGGATGGTATCGGAAAGGGTCTTGACCCCCGTTTTGATATTACTGAGATTGCCAAACCTTATGCTTTGGAGTTGCTAAAATTC CGCGAGGCAGGAGTAGAAGTTATCCTAAAGGACGTCAGAAAGAGATGGGACAGACAATCTCAAGCATTTTACAACTTATTTAGACAAGCTGATCGGATTG AAAAGCTTGCAGAAGTCATCCAAAGATTGGAGCAAGGTGACTTAAAGCTCCGAGTTCGAGCTTTGGAATCTGAAAGAGCTTTCCAACGTGTTGCCACTGT CCAGAAGACAATAGGGAATGCAGTAGCTGCTGGGAGCCTAATAAATCTTGCAACAATTCTGCATCTCAGTTCAATTAGGGTGCCTGCCACCATAGCTTAT TTCTTTTGTGCAATCTTTGGTCTTCAAGTTCTCATTGGTATTGTGAAGACCAAGAAGCTAGATGAACGGGAGCGGTTAATTACAGGAACTGCTTAAGCAA CTACCCATTGCAGATTCAGGATGAACATGTTGCTCATGTTAAGGTCATGGTTGCAAGTCAACCTCAAGAGCATCAACATACCAAGTTAATAGGCACCATT TTGCAAGACATCAACATGCATAAACTTTAAGCTGAAATTTTTCTGGAGGCCTCTTCTGTTCAATTGATTACATTTTGCAAGCCACATTTTTGTCTTTAAA ATATGAATCTTCTCCTTCCAAATGCAATTTCTCAAATAAAAGTTCATTATACTTTTTTATTTTATATCCATGTAATCTATAGGCATTGTTGTATTTACCA TATGATATGGTGCAGCTTCCAACAAAATTTGATAGTGGAAGCTCTGTTGTAAATTGTAACTGACGTACATAAATTTATTTAATAAAAATACAAGTCTAAG TATTTGCCA
• Tissue: pods
• Gene name: LI_gene_187005;
• Additional information: details;

Expression of Ll_transcript_295856

FPKM

• PAB: 6.9
• PNAB: 12.6
• PS1: 7
• PS2: 3.1
• PS3: 5.6
• PW1: 9.2
• PW2: 10.1
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295856

• Blastp: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 67.84% of identity
• Blastx: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 86.4% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT5G64940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462413.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;