Ll_transcript_295838

• Id Trinity: TRINITY_DN51702_c0_g1_i4
• Name Transcript: Ll_transcript_295838
• Sequence: AGAGGACAACGTGGACACGTGGTTTATGAATAACCCGCGAAAATCCCTGACCAATCAAAATCCTTGAAAACCTTCGCCGCTCATCACCATTATGCCACGT GTCCTTATCTAGTTCTCCCCTTTGTCTTGCACTTCTATACTCTTTCACTGTCCAATTCAATCTTACACGCCATGAATACTAGGCTTCAACCTTGATCCTC TCTCTCTTGAAATTTGAAAACTTCATCAATAAATGGCTTCCTCTTCTATCACCTTACCCAACCTCAATTTTCTTCCTCCACAAATCACTCTCAAGCATCG CGTTTCCCTCATAAAATTCCGCTCTTGCAATTCTATTTCACGAAAATCCAGGTACTACAATGTTACACTTCGCACGAGGATCCGCGCGTTGATTGAAGAA AGAGTGAGTGATGTGAAGTGGAGTGAAAATGGAGTTATTGGAAGCAACGGCTCAGTGAATGGTAGTAATAGATTGGTGGTGAATGAGAGTGAGAATAATG GAAATGGAAGCGTAGTGAAGTATGTGAACGGTAACGGTGTAGCGGCGTCGAAAGAAGTGGTAGAAGTGGAAGATTTTGCTGAAGGTGGGAAACGGAAAGA GGATGGGAGGAAGAAGAGAGTGGAGGAGATTGGAAAAGAAGACGCCTGGTTCAAACAATCTGGGAAGTCACAGGTTGAGGTAGCAGCTGCGCCTGGTGGT CGCTGGAGCAGATTCAAGACTTACTCGACAATCCAGAGAACATTGGAAATTTGGGGATTTGTTATAACATTTATCTTCAAGGCTTGGTTGAATAACCAGA AGTTCTCATATAGAGGAGGAATGACTGAGGAAAAGAAAACCTTTAGGCGAAAGACCCTTGCCAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCTAC ATTCATCAAAATTGGCCAGCAATTCTCTACGAGAGTGGACATACTTCCTCAAGAATATGTTGACCAGTTGTCAGAACTTCAGGTTAAATTGTAGCTTAAA CATCATCTATAAGGTCATATCCATGCAAGGGGATATTTCGAACTAGCTTTTGTTGTATTGTCTTTCTTATCTTCATTGTTATTTGTCATAGGTTCTATAG TTTCATGGGAGATGAATCACAATATGTCTAACTTTTAGGTTTGTTCTTCATTTATTTGATTGAGGCTTGGCTTTCTATTGTCAACATTCTATTAGTTGTT TTGTAAGAAATCATGTGGTATTTTTGTACCAAATTCATGATCATCTATGCAAATTTATATTGGAAGTCATTACATGACAGGCAAACTTTCCTTCTATAAG GTTAGACTGAGGCATTGGTGCGCATGCGTTCTTCAGTTTTAATTTAGTTAGTTGTAAATCTTATTCGCCTAATTTAAAAAGCTGATGACACAATCATCTT GGGGGGGTGGGGACTGAAAGCCTTCATCCAGAAGACAAAACATGTTAAGGTTGCATTTCTTCAGGGCTTAAGTTACACCGTTTTTTGGTTCAGGATCAAG TTCCTCCATTTCCCTCAGAGACTGCTATAGCTATTGTTGAAGAGGAGCTAGGATCTACTTTACATGGCATCTTTGATCAGTTTGACTATGAACCAATTGC TGCTGCAAGTCTTGGTCAGGTTCACCGTGCAAAGTTAAAGGGACAGGATGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGGTCTTTTTGATATCGAT CTTAAAAACCTAAGGGTTATTGCTGAATATCTTCAAAAAGTAGATCCTAAATCAGACGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAGTGTGCCT CTGTTTTATACCAGGTGACGATATTCTGGAAAATTGCTGCAGTCTTAGTTTATTTAAGATCAACCGAAGAAAGTCATGTCTAGCTCATATCTTTATTGGT GTAATTTTGTTTTAATGAATTCAAGCTATAAGATTGCGTAGGAAGACTACTACTTTGGAGTATGATTTAAGTTTGGATGCATGGGATGGGTCTATCGCCT GGCTCTGCTCTTTGAAATTGCACATGTGCAAACCAAGGAAGTTCCTCTAGGTCATGGGAGACTTTTATAACAAAGCTCTAGTAAATACTTTTGAAGGTTA CTTGAGAAGCTCCTTAATCACACAAAAGGACATAACGAACGGCGTTACTTCAGTTGTTTTGACAGAAGGGATAGAGTGCCCTGCAATTTATCTGGCTAGA TAATGGTGTAAAATGGAAGAAAATGAATTATGATGTGTAGGCGTAGAGGCATGCTCTTTGAGTCTTTCATACTTCATCAGTTGTTTTCTAAAACAAAGAA TGATATTATTACTTTGGAAGGGTTAGAGCATATATGATGCATTAATAAAGGGATTCTTGTAGCAATTATTGCAACGGTTGGGAGGGTCGAGTTCTGGATC TTGTTCTTGTTTCCATATGATGTTTGCATGTGTTTTCTGCACAACTCTATTTAACTTGAATTAACTATTTTCAGGAGATTGATTATACCAAGGAAGCTAC TAATGCAGAACTATTCGCGAGTAACTTTAAAAACATGAGTTATGTGAAAGTCCCTTCAATCGTATGGGATTATACCACACCACAGATTCTAACGATGGAG TATGTTCCCGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGCACAAGGTTAGGGCGATATGCTGTCGAGTCTTACTTGGAGC AGATTCTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTTTACGATTTTGGTAT GATGGGAAGTATCAGTCAAAACGTCCGAGAAGGTTTACTTGAAACTTTTTATGGAGTTTATGAGAAGGATGCAGACAAGGTCCTTCAAGCAATGATTCAA ATGGGTGTTCTTGTCCCAACTGGAGATATGACTGCTGTTAGACGGACAGCACAGTTCTTTCTCAATAGTTTTGAAGAGCGTTTGGCTGCACAAAGGAAGG AGAGAGAGCTGGCTAAAGCCGAACTTGGGTTCAAAAAGCCATTAAGCAAGGAGGAAAAAATAACGAAGAAGAAAGAACGTCTAGCTGCTATTGGTGAAGA TTTACTATCCATTGCAGCAGACCAGCCCTTCCGGTTCCCTGCTACATTCACATTTGTTGTTAGAGCCTTCTCGGGTAAATATTGTCAAGTTAAAAGGGTT ACTTTGCATGTTCTATGCATGTGACTGCAAGATAACAAGTCAACATTGTTTCTGCAGTGTTGGATGGCATTGGAAAGGGTCTTGACCCCCGTTTTGATAT TACTGAGATTGCCAAACCTTATGCTCTGGAGTTGCTAAAATTTCGTGAGGCAGGAGTTGAAGTTATCTTAAAGGCAGTCCAAACTTGTTCTACTGTGCTT GAATTCAGTCCGAGTATTATGATTTTCTTTCTCATATCTTTCTTATAATTGTACAGGACTTCAAAAAGAGACAGGACAGACAATCTCAAGCATTTTACAA CTTATTCAGACAGGCTGATAGAGTTGAAAAGATTGCTGAAATTATCCAAAGATTGGAGCAAGGTGACCTAAAGCTCCGAGTTCGAACTTTGGAATCTGAA AGGGCTTTCCAACGTGTTGCCACTGTCCAGAAGACAATAGGGAATGCAGTAGCTGCTGGGAGCCTAATAAATCTTGCAACAATTCTGTATCTCAATTCAA TTAGTGGGCCTGCCACCATAGCATATTTCTTCTGTGCAATCTTTGGTTTTCAAGTTCTCATTGGTATTGTGAAGATCAAGAAGTTAGATGAACGCGAACG GTTGATTACTGGGACTGCTTGAGAAACTACAAGCCCATTGCAGATTCAGGCTGGACATGTAATTCATGTTATGGCCATGTTTACAAGTCAACCTCATTTG CATCAAAAGGATTAGGAGATCAAGTTAATAGCTAAATTTTGCAAGACATCATGTGCAGAAACAAACTGACAAGTTTGCTGGAGTCTTTATCTCTTCGATT GATTACTTTGCTAGTATGAGCATGCTCTGAGGTAACCAATTGGCCAGCCACATTTTTGTCGTTAATATAAACCTTCCCCCTCCTTCCAAAAGTTTTTTGT ATCAAATAAGAGATCATTGGTGCCTTTTTACCTTGCATCCCTGTAACTTATAGCATATTAATGTAGAGTTCATTGTTGTATTTACCATATGGTATGCTTC AGCATCCAACAATATTTGACAGCGGGAAGCCTTACTTGTAACTTTACGTGCATAAATTTGTTAAATGAAAATACAAGTGTAAGTATTTGTCATCCAAATT CCAATCCATAATTTGGACTTAAGTTGCCCG
• Tissue: pods
• Gene name: LI_gene_187005;
• Additional information: details;

Expression of Ll_transcript_295838

FPKM

• PAB: 0.6
• PNAB: 0.5
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295838

• Blastp: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 54.23% of identity
• Blastx: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 87.76% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT5G64940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462413.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;