| Id Trinity | TRINITY_DN51705_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_296425 |
| Sequence | ATTTGTTAAAGATAGAACTTTTCTAATGGGCCTTAAGCATTTTAGTAAGCCCAACGGCCCAAACTCATCATCATCGTTTTCTTCTAACATTTTCAATTTG TGCAGTGTTGAGTGAGATGAACATGGCAGAGGAAGAAGAAGAAGCATTAACGAAAGCTACAAGAGAAGTTGAAGATCTTTACCATATCAGAGATACTTAT TTTCCACCTGAACCCATTGACAGAATTTCTAAGCTGCAACATCATTCCGATCTCGCTCTTCAACTCCTCGATTCCGTTCCTCTAGAACAAAGGAAATCGC CTATGCAACGAGCAACATTTGAATATCTCAGAGGGAAGATATTGGATGTATTTCCTGATTATAGGAAAGAAGCCGAGGATCATCTATCAAAAGCTGTTAA GTTAAACCCATCTCTTGCAGATGCTTGGCTTTGTTTAGGTAACTGCATTTGGAAGAAAGGTGATTTATCAGCCACAAAGAATTGTCTAAGTCTTGCATTA AATAAGGTTAATGCCAACACTGGAGATCCATGATTTAAATTACATTACGGGTGCAGTAATTTTGTTCTGGTTGAGATTCTGCACAGTGAACTAGTGATGG ATATTGGTTGTTATGCAGGGTCCTAACAAAAAAATTCTTTGTCAATTATCAATGCTTAAAAGGAAAATGTCTCAAGGTAAGGGTTTTGCTTTTACTTTTC TATTTTTGAAGATCATCCTTTTTTAGTTGTCCTGATTTCTTTAGTCGTTGTCCCTTTTGGTGTTGATTTTAGCCATCCTTTTATTAATTGGTTAGACAAG TTGGTTTCAAGACTGGTTAATTCTTAATGTGTTCTTTATGGTGTAATATCTGGAGATACTTTACCTTAACCACTAGAGAAATGGGTTTAAGATCTTTCTT GATGTTTTGGATAGAGTATATCTCTTTTTCCCCTTTTAATAGCAGCAATAAATCCTGGTAGTTGTACGGTACTTCTTTATCAGTGGTCTCAGATTTGATT ATGCTACTTGGGCATCAAATTAAGATTGAATGAAAATGTAAAAGTAGAAAGAAATATGTGGTGTTATGATATGCACTTGCAGAGCAGTTACTTTGGTTTG TTTTGTAATGAAAAAATTGAAGGTAGAAACTTATGCTTAGAAACAAGAAGTTGGGAAGGAGAACGGAGTGATGTGGGGCAGATAAGAATGTAAGAAAATG TAGAAAGTGTAGAGAAAATGATTATGTGTAAGTTTTTATGTTTGCATAAATACATAACAATATAATTCCTTTAAGTTTATCTGACAAAATGTGAACAGAA TAAGCACTTTGTGGTATGTTTTTGGAGAAAACTGAAAATTTTAAACTACCTAATAGTAGAGCAGTGCTATTTTCCTTGCTATGTACACAGGTGCAGAGAA TCAGGTAGAACTTGTTGAGGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTGGATGTCAAAGATGGGAACTCTTGGTGTACGTTTGTTAAATAAACT ATTACTTTGATATATCTGGCATATCCTCTTATTGATTAACCACTTGTAAATATATGTTCATCTGTAAACATGTCGGTTGCTGTAAATTAGCTAGTGATTA GGCTGTCAGTTAGCTACTGATCTTCTCCTAGACTGATTAATATTTCAATTAAATAAGGGACCGGTTTGCATCCTAAACACAATTTGCTTAAAATATTGAT TATCCCCTTGGTTGTTCCTTGATTAACTGTAATTACACCATAAAATAAGGGCTCGTTGTGCAAACTAGACATGCTCAATTTCTCTCATACTTTATGCTCA CCTTCCCACTAGACATTAATCTTTATAGTTATTATGACCTTGGTCAAAAAAACATCATAAATAATGCTGTTCATAGAATCTGAAAACACTTTTATTTATT TTCATGCTTGTCCTTGAAAGTTGTTTGTAACTGAGGTCTCTAATATGTGGGAAGGGGGTGTTAGATCTTGTCTGTTGTGAATATAAGTTGCAAGATCTGT ATGTTTTAAGTTTTAACATCATCTGATCTCCTTGACAGATAATCTTGGAAATGCATGCCTTACAAGTTTTTTTGTCAATGGCGCTTGGGATCATAGCAAA CTTTTAAATTCTTTGAAAGCATATCAAAATGCTGTGAGTGTGAAGAAGAATGATATAGAATTTAGCATCAATAATGTGTTATTATCTTCTTATATTTTTA GTGAATTTTAGGCTTATCCCTTACATATGTGGAAAACCTAATGATGTTTGGCTAATATGTACCAGGAGAAAGATGAAAGAATGAGTTCTAATCCAGATCT ATATTTTAATAGTGCCACTGTTCACAAATATCTAGAGAACTACCAGAAGGCTCTTAGTGGTTTTGAGGCTGCTGCTTTAAAGGATCCGGGTCTCAATGCT GCAGAGGAGGTTCAGAAGATAGTCAATTTACTTGACAAGGTCGACAATTTGTTGAGGGGACATGTAAGAGTTAAGCGAATTGCATCTTTGGCATCATCAT TGTCTGCTGTTAATTTGAATTTGTCATACAAAAGAGTTACCATAAACCTTCTATCAGAGGGTCCAAATAGAGCTGTAGCGGTTGAGGGGAAGGTGTTTTT CTTTATCAGGAGTGAGAGTATTGCTCCTCTATACTATTTGCTTTGTGATGCAAATCAAACTTGCTTTGTTCTCTCAGTTTATGGTGTACATAATGATGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_187021; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296425
| Blastp | Tetratricopeptide repeat protein 5 from Homo with 33.97% of identity |
|---|---|
| Blastx | Tetratricopeptide repeat protein 5 from Homo with 39.23% of identity |
| Eggnog | tetratricopeptide repeat domain 5(ENOG410XP1F) |
| Kegg | Link to kegg annotations (91875) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453516.1) |
| Pfam | Tetratricopeptide repeat protein 5 OB fold domain (PF16669.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |