| Id Trinity | TRINITY_DN51706_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_294869 |
| Sequence | CCTCATTTCCCACTCCCCAATAATGTCGCTTTCTTTGTTCACTTCTCTGTTTTTTCACTATTCTCTTTGCATAATTTCAGGATCCACATCAAAATATAAC AACAACAAAAACACCAACACCAATCCTTAAACAAAGATTCTTCTTCATCATCATCATCATAATCATCAAGAACATCAAAGACTTTGTTTTGTGCATGATC ATCATACATGGGTGTCTTACATGATAAGTTATTGTCCTTATATAGAAGCAGATGGTTAGTTTTTGTGGCTGCAATGTGGTTACAATCATGGGCTGGTATT GGATATCTTTTTGGAAGCATATCACCAATCATAAAGAGTTCTCTTAACTATAATCAAAAGCAAGTTGCTATGTTGGGTGTTGCAAAAGACCTTGGTGACT GTGTTGGATTCATCACTGGTGTGTTGTGTGAGATATTACCTATTTGGGGTGCTCTTCTTGTTGGTGCTTGTTTGAACCTTTTTGGTTATGGTTGGGTTTG GTTGGTTGTTACTGGAAGAGTTTCAACTCTACCTTTATGGGCTATGTGTGTTCTTATATTTGTGGGAACAAATGGTGAAACTTACTTCAACACAGTTTCT CTGGTGTCCTGTGTGCAAAATTTTCCGAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGATTTGCAGGGTTGAGTGGTGCAATCTTGACACAAATAT ATGCCATTTTCCATTCCCCTGATCATGCATCATTGCTTTTTATGGTTGCTGTTGGTCCATCATTGGTAGGAATAGGTCTAATGTTCTTTGTTAGACCGGT AGGAGGTCACAGACAAGTTCGGCCATCGGACGAAAAAAGCTTCACATTTGTCTATGGTGTTTGCCTTCTATTGGCTGCTTATTTGATGGGAGTTATGATT GTCCAAGATCTAGTTCCTCTGAATGAAATAGTTATCACAATGTTCACAGCTATTCTGTTTATGATCCTACTTATTCCTATTGTAATTCCTATCTCATTGG TTTCTAGTCCAGATCAAAGACCTATAGAGGAAGAGACGCTTCTTCCGGAACAACAAAATAGTGAGCCAGGACAATCTCAGCAGTATTCTGATGAAGTAAT ATTAAGTGAGCTTGAAGAAGAAAAGCCTAAGGAAGTGGACTTGCTTCCGGCTTTAGAAAGGCGAAAACGTATCGCGCAATTACAATCGAAGCTACTCCAA GCAGCTGCAAAAGGAGCAGTGAGGGTAAAGAGAAGGAAAGGACCACATAGAGGGGAGGATTTTACCTTGACACAAGCATTGATCAAAGCAGATTTTTGGC TTATTTTCATTTCCATGGTCTTGGGTTCTGGATCCGGGTTAACTGTTATCGACAATGTTGGTCAGATTAGCCAGTCTCTAGGATATCACAATATGCATAT ATTCGTCTCTATGATCAGTATTTGGAACTTTCTCGGACGAGTCGGAGGTGGTTACATATCTGAGATTGTTGTGAGGGATCATGTATATCCAAGACCTATT GCACTAGCTGTATTTCAACTTATTATGACTATTGGGCATGTTTTCATTGCTATGGGATGGCCAGGAGCAATGTATGTTGGAACTTTACTAGTTGGACTTG GTTATGGTGCTCATTGGGCCATTGTTCCAGCAACAGCTTCTGAGTTATTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATTACTCTAGCAAACCC TGTAGGAACTCTTGTCTTTTCTAGTCTCATTGCAAGCAGAATCTATGACTCAGAGGCCGAAAAACAAGCTCGTGATGGCCATCGCGACAATCGGGGTATA GGATCATTTATGTTCGGTTCGATTAATGCTGGTCAGCCACTAAAGTGTGAAGGTTCTATATGTTTTTTCCTGACTTCAATTATCATGGCAGGATTATGCA TTGTTGCATCAGGTTTATGCATTATTCTAGTATTTAGGACTAAGATTGTTTATGCCAACCTATATGGAAAATCTTCTAGTAGTAGGCTTAGATAATAAGA GTTTGGACTAAGTATTTTGCTGCTATAACATTGTTGTGTATATTTTTCCAAACATTTATGTGTTGTATTCTTTCCTTTTGTGAGATAATTTTTCATTGGT ATAAGAAAAATCATTATTGCTTTTATCAGTAGTGGTGCTAAGATTATGCACTGTATCTAATAAGTTATATCATAGTTGCAAAATGCCTTGTACTTGGACT TAAAAGGTTGTGATTGATGATTTACTAGATATTGGTGTTCAATTTATTGTGTATAAGACTATACGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_187025; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_294869
| Blastp | Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 23.88% of identity |
|---|---|
| Blastx | Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 31.08% of identity |
| Eggnog | Nodulin-like(ENOG41105RT) |
| Kegg | Link to kegg annotations (AT1G31470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438652.1) |
| Pfam | Nodulin-like (PF06813.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |