Ll_transcript_295634

• Id Trinity: TRINITY_DN51712_c1_g1_i5
• Name Transcript: Ll_transcript_295634
• Sequence: TTGATAGCAAAGATTGGTCTCGGTATGGATACATGCGTAGAGTCTTCATAATTTTGAAGAACAACTTTAAAATTTTGGAACTACAATCGGGACTCGAAGC CCCCTGCTCAAACAAAATGGTAATCCTTCGGAATTGAAAATTCCTTTCGGATTTATTATATTCATAATTATAGTGGAGGGGAGAAGACTCATTTTTAATT CTATCTATATAGGGGGGGGGAGCCATTGTGAAGCCTAGAGAGGCGGAAGCGGCAAATCGCTTCTACCGAGTTCCCCAACAGCAGCTTAGCTTAGTAGCTT AACTCTTTCTACTGGCGTGGTGCTACTGGATGCTTCTGATCAATAGAACAGGAACAGGAACAGGAACAGGAAGAGGAGGAAAAAAAAGCTTATGATGAGC ATCTATTTGAGTCGATCATTTCCAAGATCTAATTCAAGTTTATTCTTATGTAGTGGAAAGGCCTTACAATCTGAAGTTTTACGCTTAGGGGAAGAAATGT TCTTGGTGGATGCAGGACCTGGGACCGCCATAATTTGTATGCAAGATGAGCTTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAAGAAGGTGGG ATTCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAAAGAAGATTTTGGAGAGATTATTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGA GCAGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTCTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGA TGGAACTGAACAAGATTTGGCGAACGAATACAAAGGTAAAAGGCTTTATTATTAAAAAAGTAAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTAC TTTTATTCCATTCCGTTGTTACAAAAAAAGGAAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGGATGAATATTGTGGTGTTC TAACAGCGGCAGATCAAAGAATAACTTGATGAGCGAAATCTGCTGTAAAAAAAAAATAAAAGAGCAGTTTTTTTAAATTCCGAAGCGAAACCTAGCGTCT CCTGATAACACTCTATCACCTTAATCCATTCTTTTGTTGAGGGTCTGGCACTTATGACAGGCCGCTCTGTCATTGTCTGATTTTTGGTTGTCTGATCACA CTCGAAATTATGTATCTACTTATCGTCTTTTTGCCCCTTATCGGTAGTTCCGTAGCAGGTTTTTTCGGACGTTTTATAGGATCAGAAGGAACCGCTATAA TGACCACTACGTGCGTTTCATTCTCTTCGATCTTATCTTTGATTGCTTTTTATGAAGTCGCACTGGGAGCTAGTGCTTGCTATCTAAGAATTGCTCCATG GATCTCATCGGAAATGTTTGATGCTTCTTGGGGCTTCTTTTGCGACCGTGAAGTCACCGGATGAATTGCCGAGTAGATAGATCAGATCCGGACGCGGCTG TTGCTCCGCGGCGATACGGACTCGACCCGCTCCTACCCACCCCGGGGTACCATAGCATGTCGGGAAGAAGGGGGGACATACTGGACGTAACCACTCCCTT GGGGGCTGTGCCGCCCTGCCTTTCGATCGATACACAGTTGAGTAGGCCGATCACGAACGCTACAGGTGTGGGAGCGATCCTGGTCAGGGAAGGCTAAGAC GGCGCCTCGCATATGGGTAGCAAGAGGGCGCTTATGCCCCGACGGTGGGGCCTTATGGGGAAGGGCCCAGCCCAGATTATAGGGACTGCACACCCCCCAC TTCAAGCGCACCTCTGTATCGACTGAATCACTCTAAGAGTCTAGTCGGTGGAACCGGTGAACCACGCGAGCTGGTTAGATGCGTGGGGCAGAGGGCTCGT AGTACCCCCTTTTCTTGATCCAGCCTTTTCTTCGCTTCGGTAGTGAATTACCTACTAAAAAAAGAGGCAGGCCTGCACGCCCTATTTGAGACTACTAAGG CAGGCGGTGGACTCTTTCATTAGGGAAGGGAAGAAGGGGCCTAAGCACGGCAGATGCCGTACACTTGAGTGGCAAAGGAAAGGGAGATCGTACCTCTTTT TCCAGGCCTGTTCGGACATACGGTTCCCGCGGAAGATCAAGTTGGTGAGCCGTGTGATGGGAAACCTTCCCGCACGGTTCGGAGAGCACTTAATTAGAAT GAGAGGTTCACCACCACATCATTGCATGCAAGGAGAGCTCGCTCGATTCGCAAATTGGTCCGACTCGTAATTCACTTCTGACTCCGTGTTCGATAGCCTG ACCGTAGTGATGTTAATTGTGGTTACATTCATAAGTAGCTTGGTCCATCTTTATTCCATTTCATATATGTCTGAGGATCCGCATAGCCCTCGATTTATGT GTTATTTATCCATTTTTACTTTTTTTATGCTAATGTTGGTGACTGGAGATAACTTTCTTCAATTATTCCTGGGATGGGAGGGAGTAGGTCTTGCTTCATA TTTGTTAATTCATTTCTGGTTTACACGACTTCAGGCAGATAAAGCAGCTATAAAAGCTATGCTTGTCAATCGAGTAGGTGATTTTGGATTAGCTCTTGGG ATTTTGGGTTGTTTTACTCTCTTTCAAACAGTAGACTTTTCAACCATTTTTGCTTGTGCTAGTGTCCCCAGAAATTCTTGGATTTTTTGCAATATGAGAT TGAATGCCATAACTCTTATTTGTATTTTACTTTTTATTGGTGCTGTTGGGAAATCTGCACAGATAGGATTGCATACTTGGTTACCCGATGCTATGGAGGG TCCCACTCCAGTATCCGCTTTGATTCATGCAGCTACTATGGTCACAGCTGGCGTTTTCATGATAGCAAGGTGCTCCCCTTTATTTGAATACTCACCTACG GCTTTGATTGTTATTACTTTTGCAGGAGCTATGACGTCATTCCTTGCGGCAACCACTGGAATCTTACAGAACGATCTAAAGAGGGTCATAGCTTATTCAA CTTGCAGTCAATTAGGCTATATGATCTTTGCTTGCGGCATCTCTAACTATTCGGTTAGCGTCTTTCACTTAATGAATCACGCCTTTTTCAAAGCATTACT CTTCCTGAGTGCAGGTTCGGTGATTCATGCCATGTCGGATGAGCAAGATATGCGGAAGATGGGGGGGCTTGCCTCCTCGTTCCCTTTTACCTATGCCATG ATGCTCATGGGCAGCTTATCTCTAATTGGATTTCCTTTTCTAACTGGATTTTATTCCAAAGATGTGATATTAGAGCTCGCTTACACTAAGTATACCATCA GTGGGAATTTTGCTTTCTGGTTGGGAAGTCTCTCTGTCCTTTTCACTTCTTATTACTCTTTTCGTTTACTTTTTCTAACATTTCTAGTACCAACTAATTC ATTCGGGCGAGACATCTTACGATGTCATGATGCGCCCATTCCTATGGCCATTCCTTTAATACTTCTGGCTCTCGGGAGTCTCTTTGTAGGATACTTGGCC AAAGATATGATGATTGGTTTAGGTACAAATTTTTGGGCCAATTCCCTCTTCGTACTACCAAAAAATGAGATTCTTGCCGAATCCGAGTTTGCTGCTCCAA CCATTATCAAACTAATACCTATTCTGTTTAGTACTTTAGGTGCTTTTGTTGCGTATAATGTAAATCTCGTAGCGGATCAATTCCAACGAGCCTTTCAAAC GAGTACTTTTAGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTATAGTCAGATCGTTCCTGCGTTTCGGA TATGAAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCTTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGGATAAGTA AACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAAACGGGAAAC CCGACTCTACGAACCCGAGGAAAGGCTGCAAAGCAGTAGTAGGGGCGTTCAGACCGGAGCTTTTTGTAGTGCTAGCAGGAATGCAAGTGAATGAATCCCA TCCCCTAGCGAGTGAAGTGCTTACGCCCCTTTAGATTAGAGATAGGGGCGCGCTAGCGCTTTAATAATAATAAATAATAGAAAAGGGGGCTGAGAAAAGC TTGCTGTCTACTTCTCGAGCCTTCACTGCCCCGTTCTTTAACTTCCCTTCTTTAGTCCGTCCACGAGGCTGTAAAAAGAGAGAGAGGGGCGGCTATATAG CGGGAGTCGTTTCGGTTGTATGCCACGAGGTCCCTATGGACAAGGGGACAAGTGAATCATCGCTTTTGGGCGCAGGCAGCCCTCTACCATCCATCCCATT GCATTCCATCGTCTCGTATTGTACTGTACCGTACCAGACCAGATACATCTATTGAGTGAGAGAAAGGTAGCTTCTCTATATATATTCTTAAAATTTTATA TTTATAGGGATCCCCAGATTCCCGTCACTACGGATTTTTTTTCTCTACCTAACTACATGGTAGTGGTCTAGGGAGCGCAATTGCTAGAGCACGGGAGAAT GAAGAGTAATGATTTCAGCAAGAGCAGCCGGACGGACTACTATAGTGAGTCCAGTGACTACTAGAGTAGAGTTGAGTCAAAAGGTATGGTATAGCTGCCT TTCCGAGCGAGCCTCTGGGATCTCCTGTAAACCCCCATGATGTGGTAAAGTAAAGGGAGGATATTAGGGGAAGCAGTTAGTGGAGATTCCCCTGCAGAGA GCCGGATGAGGGGAGACCTTCACGTCCGGTTCGGAGGGCGGGGATATCCCGACCCTACTATCATTATGCCTTTG
• Tissue: pods
• Gene name: LI_gene_187064;
• Additional information: details;

Expression of Ll_transcript_295634

FPKM

• PAB: 2.1
• PNAB: 8.3
• PS1: 6.8
• PS2: 3.5
• PS3: 5.4
• PW1: 2.6
• PW2: 5.2
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295634

• Blastp: Ribosomal protein S1, mitochondrial from Marchantia with 35.12% of identity
• Blastx: NADH-ubiquinone oxidoreductase chain 5 from Arabidopsis with 97.78% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002281)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (YP_009237614.1)
• Pfam: -
• Rfam: Intron_gpII (RF00029)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;