| Id Trinity | TRINITY_DN51712_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_295648 |
| Sequence | GGACGCTGTTGTTTTCATTGCGGCTATAACTTTGACAATAACCCAGGCTTCCATGGTGATTGCTTAAACTCTACACACTAAATTTTCATCAATAATCATT TGCATTCTTAGTAGTAAATATAGTAGGGCCTATTTGGATGTTTGAATTGAAACACAGAATTTCAATTCAATTCCAATCCTATACTTCTATACAGAATTGG AATTGGCAAGGAATCTTCATTTTTATGGTTGGAGCAAATATAGATTTGCAGTTATCGATGGATGTCATCAATGATGATGGTTGGTGGATGATGCCAATGA CGATGAATGGAGGGAGCCTGCAACAACGAATGCCATTGATGACCATGGTTGATGGACATTGTGGGTGATAGTGGGTAGAGGATATTGCTCATGGCAAGTG TTTAGTGACCACTATTAAGGACGATGGTCAAAGTGTGCCCCGATAATGATGGTTGGAAAGTGGCTCTAACTATATGTCCTCTCATACTGTGAGCATTCTC ATTATTCTCCTCACTGAGAATTCTCACACAGATAGTCTGAATGCAGATGTGGCAGTTAGAGAAAGGACAGCTAGGTTGAGTATTAGGTTAGTGGAGTAGA GTATATACGAAAGGGAACACAAGAGAGAAGGCAGGCAATTATCGAGTGAGGTTTTTGGTGCCTTTAGTCAGGAAGGTTGCAGGTCTTTTGAATGACCTGT GGAATCTTTTCTTTCTCGTTTCTGTTTGAGTTTCTTCTTTCTATTGTAATGCCTTCTTGGTACTGGTTTCTACATAAACTAGTAACTGGAGGAGGTTCTT AGTAGACATTCCATAAAATCAGATTGTTCAGTATTAGGTACCTAACATTCTTGAACCAAGTTTGTTGAACTAATTATCGAGTAGCAGTAGTATCATGTTT CTAAGTAAAAGGAGAGGATCCAAATACATCATTGACTCTTCCATGTTGGGTATTTATCATACTGGGCAGAACCAACCTTCCCAATATAATTAATGTTAAG GGGACCTCTTATTAAGTTTAAATGAAAAAAACGATGGATGTTTTTTTCAACTTAATAAGAGGTCGTGTACAACAACCTTAACCGCACAAGCCTGGGCTGG GCCTACCTCCATCCCTAGAGGAGCCGTATGAGGCGGAAGCTCCACGTACGGTTTTGAAGCCGAGCCTTTCCAGCAATGGGGCTTAGGGACCGATATGATG ATTGGTTTAGGTAGGGCGGCCGGCCTACTACGGGCACCTGTAGGGATTAGTGCGTGAGACCGCGATCCACAAACTGACGCATGGGACTCACCCTTTACTT GGGAATGAAGAGGGGAAAGATAGCATGTCACAAGAGCGAGGCGAGGTTTGGAACCCTACTGCGAGAGGGACGCCTCGCGAGCCGGGCTTCTAGAGATGAG GCCTTTTGGCGAAGCCAAGTCAATTTCGGGCCACCAAACCCTGCAACTGATGAGAAGGCCCTATGGAGTAAAGGGAAGCGTGTACGTTGTCACACTCCCT GCCTTCAAAAGGTGCCTAGAGGACGGGCCATAAGACGCAAGCGACGACCCGGGAGCGGATTCCCCACCGGCAGGGGGACAGGAGACGGCCATCTCGAGGC ACATCACGACCTACAGGCAAGACCGGCGAGACCCGGGAAGGCAACCCGATTGGGAGTCAGAGGATCCATAGTACCTGCAGCCCCGCGGACTTCATCTTAA TCATTTTTTAAAAGCGGGGGGGAAGGGATCTCCTTTCTGCAACGGAAAAAAAAAAGGGAGCAGATTTGACTCGGCACAACCTAACGATGCATCCAATACC AATGATCTTACCCCATGGCCCATGTGAAAGTGCACCAACACTTCCAAGGGAGCAATTTGAATAATTCCCTTAGGTCGTCCACATGATTACCATAGTCAAA TAGGGAGACCTCAGTCCAGCTCCCCACCAATGAATGTTGGCGACTTCTGTTCCAACTGAACTGGGAACAGTCAGGTGCACCCATTGGACCCGAGGGACCG GGGTATAGTAGTTAATTTTATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187066; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295648
| Blastp | Uncharacterized mitochondrial protein AtMg00660 from Arabidopsis with 56.14% of identity |
|---|---|
| Blastx | Uncharacterized mitochondrial protein AtMg00660 from Arabidopsis with 74.67% of identity |
| Eggnog | NA(ENOG410YMUZ) |
| Kegg | Link to kegg annotations (ArthMp059) |
| CantataDB | Link to cantataDB annotations (CNT0000014) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421924.1) |
| Pfam | - |
| Rfam | Intron_gpII (RF00029) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |