Id Trinity | TRINITY_DN51714_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_295012 |
Sequence | TTAAAAACAGACACTACAATCTGTTGACGGCGAGCCTCTCCACTCACCACACCACAACCACCACCACCACCACCACCACCACCACCGTCTCCTGTGAGTT TCCACGTCGCTGCGTCACTAATCATGGTCTCTGTGCAAGTGTGACATGTCTTTGGCTATGATAGATCATATTCTGTTGCATCGCGTTACTATTTCATTGT AACTTTGGAACAAATTGCAAGTCTATTTTTCGAGGGCATAACTAACAAGCGAAGAATTACATAGTAACGCTAAGTGAAAATAAGCTGCCTTGTTTTCTTT CAGAATCATGGTTTCTGTGTGAATGTGGTATTTCTTTGGCTACAAATACAATGGAGAATATATCTCAGCCTGACCAATCTCCAACTGTGTTCGGATTAGG GTCTACTTACCCAAAAACTGGAATGCTTAATGATGATCAGTGTTTTCTCTTGTACTTCATTACGGGTACCTACTTTGGCCCCGATGTCAAAGGGGAGACC CCCAAAAAATCAGTATTGCAAAGAGTAGCTGAAGGGCTTCCTCCATACACATCTGATCAACTAACTAGTTCTTTCATGAAAGTCGTGGAATTGGAGCGTG CATATTACTATATACTTAGGAAGGCTGATAAATCACTTTCCATCAAGTTACTCTTGTTGCGTCAATTCTTTCAAGGTCAAGGAGAATATGGTGATGGCAA TTACCCCAAATTTTCTGATTTGTTTCCTCCCGAACTACATCCCCAATCTCGGTTCAGATATAAGGTTGTTGAAAACATTGTATTTATTAACAACCCAGAA ACTTTCTACATGAAGCAAGAGGATGTTGAAAGGTTCAAGAAGCTGAGTGGATTGGAGGATTTCCAAGTTGACAAAGATGCTGCAAGGTTGCATACTGCTG TTGATGGTAATGTTCTATTCAACATGTCAGTGAAGCAGGCTGAGCCTAATGGAAATATGCCCACCATTCAGTCTTGCAGTAGCACTTCAAGAGCGAGAAG CGGTGATGATTTCTCCGAGCCTCAGGATCCTCTGCAACATGTCCATGTTGTGGAACCTACCAGTAGTGTCCCGTATAGTGGTACAGGTATGATGTATAGT TGCATGTCTCCATTGCCACCTGAAGATGAGACAGATTCTGAGAAAGTTTGCCCGGCAATGTTATTCCTTCCTTCTCGCCCAACTAAGAAGGAATGGTCTG ACATTGTGGCAGCTACCAAGAATGGGTTTGCATTAACTGGAAGCGCAGCTACGGGGCAGGTAGGACCAAACGTAGGACTTATGGACATTGGAGAGTGTGA AGACTCGTACTTATTTCGTGTGTCTCTTCCTGGGGTGAAGAGGGATGAAAAGTATTTCAGCTGTGAAGTTGACACTGAAGGTAAAGTATTGATACATGGA GTAACTACAACTGGGGAGAAGACAATATCCCGGTTCTCTCAGGTGTTTGAAATGCAAACGCACAACCTTTGTCCACCGGGCGATTTCTCCATCACATTTC AGCTGCCTGGTCCTGTTGATCCACATCAATTTTCCGGTAACTTTGGCACAGATGGGATTCTTGAAGGAATGATTATGAAAAGGAAACATACATGATGCAA GTTTTGTCTGAACGGAATCCTTCCTTCTCTTCCACCAGTTAAGTTTACTGTACATTGATGCATGCTGTTAAATGAATGTGTTTTTTTAGTGACAGAATCC TGTATAGTGTTTATGTTTATTTTATTTATTATGAGATACACTAGCATAATGACATTCCCTTCAAATTGAAAAGGCCTTAGCATGGTTAATTAATCAATGT TATGGACATATGCATATAAATCATACATTTTCATTTTCAATGCTCCACCCAGTTTATCATTAAATATTAAGCATTTTTGGGTGAACTGGTTAATAGTACA AGGTTGAGTTTTGGGTTAAAATGCAACAAGGATCATTTATAAAAGAGCAGATGGAAAAATGATGACAAGGCAATTTAAGCATAAAAATATATTGACTAAC TTAAAATAATCTCA BLAST |
Tissue | pods |
Gene name | LI_gene_187076; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295012
Blastp | Alpha-crystallin domain-containing protein 22.3 from Arabidopsis with 49.51% of identity |
---|---|
Blastx | Alpha-crystallin domain-containing protein 22.3 from Arabidopsis with 49.51% of identity |
Eggnog | NA(ENOG41118EA) |
Kegg | Link to kegg annotations (AT1G54850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441159.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |