| Id Trinity | TRINITY_DN51714_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_295028 |
| Sequence | TGAATTATGTACCCAAACCCCATTCAAAACTAGTCATCACCTTTCTCTCCTCATCAACTCACTCCGCCCTACTCCGCCGCCACAACCACCGCTAACCGTC ATGTCAGCCAAGTGGCGCGCCCTTCAGCACCGCCACCGTTACACCTACAACGCCCTCGTTTTCCCTCCTTCATTCCTCAACTCCCTCCCTCAAAACGACA CCGTTTCTCTCTTCCATTCCACTTTCCTTCACTTCACAACCCTCACCTCCACTTACTCTCAACTACGCCACGCCAAAACCCTAGCCTCTTCCTTCTCACA ACTCCTAACCGAACCTCGCTCCGAACCTGAAATCAGAGAAGCTTCTAGAATCTACTTAGAACTTCTCTTTCTGGAAAATTCCACGCCGCTTCACCGAACT CTTATATCTCCTCTCACTAAGACTCAGTCATGGAAATATGTTATAGGAGAAACGTTTCGGAGTCTCTGTGAGGAGTACGGTGGTGGTGGTGGTGGTGAGG GGAAGAAGACGAGGTTTGCGGTGTCGCGAGCGGTGTTGTCGGTTTTAGGGTTGCCGAAGTTAGGGTACTTGGTTGATGTGGTGGAGAATTGTGCTGTGGT GGTTGCTTGGGATGTTGTTGTGGGTTTGAGTGATGTGGTTTCGGAGACGGATCGATTTGTGAGGCCTTCGCCGATTGTTATGGAACAATGCCAGGAGGCG TTGTCGTGTTTGTATTACTTGCTGCAGAAGTTTCCTGACAAGTTTAAGGGTTTGAGTGGTTTTGAGGAGAATGGTTGCGGTTTCGATGAGGGTGTTGTTG TTGTTGTTGGTGGTTATTTGAGTGTTATGGAGGGGATTGTGACTGTGATTTTGCGGATTTTGAGTTCCTCGGCGTTTTCGAGGGATTGCTTTGTGGCTGC TGGGGTGGCATTATGTGCTGCACTTCAAGTGTGTTTGAGTTCTAATGAGCTTGGCTCGGTTTTGATTGAAGGTATATTTAATTTAAAGGCATCAAATTCG GATGATGTTGATTCTGTTAATAGTGATTTTAGAAATGTTGTTGTGAAGATTCCTTGTAAGGATGATGTTTACTTAGGAATTTGTAATCTTTCTGTGTTGA GTAGGATTTGTCTCATACGAGGGATTCTTACAGCGGTTCCTAGACAATTGCTTAATACTCATTTTATTGCTGTGAATGGTGGTGAGGTTGGAAATGATGG TAGGGGAACTATTAGGACTATATTGTATGATGGAATTTTGCCCGAGTTGAGCAAGTACTGCGAGAATCCTACTGATAGCCATTTCAATTTTCATGCGTTG ACTGTGATGCAAATATGTTTGCAACAAATAAAAACATCGATATTGTCGAAACTTACTGATCTGTCGGGAGACTATGATCCTATTCCTGAGGAAATGGGGA TGCGGATACTAAGGATTATCTGGAATAATTTGGAAGATCCTTTGAATCAAACGGTGAAGCAAGTCCATCTTATTTTTGATCTGTTTTTGGACATTCAATC ATCACTTCGCTGGTCAGGGAATGGTGACAAAATAAACAATTTTTTGCTGAAGATTGGATCAGATCTTCTTGCCATGGGATCACGATGTAAGGGAAGATAT GTTCCTTTAGCATTGTTAACCAAGAGGTTGGGTGCGAAGAAAATGTTAAATATGAGCCCGAACCTGCTATTTGAGACAATACAGGCATATGTTGATGACG ATGTCTGTTGTGCTGTTACATCATTTCTCAAGTGTTTCCTTGAGTATTTGCGTGATGAGTATTGGTTGACTGATGGCATTGAAGGTGGCTACGCTCTGTA TAGAAGGCAGTGCCTTCCACCAGTTCTGTATGGGTTAGCATCTGGATTCTCAAAACTTCGTTCGAATTTAAATACTTACGCTTTGCCAGTTTTACTGGAA GTAGACGTGGATAGTATATTTCATATGCTTTCTTTCATCTCAGTTGGTCCAAACACGGATGAAAACGGAGTGGAATATCCAGAGATTGATTGTGCAAACA TGGAATTGAATCTTGAACAAAGAATTGCAATCCTAGTTTCACTGCTCAAGGTATCTCGGTCACTTGCTTTGGTTGAAGGGGACATCAATTGGTGTCAACA TTCTGCAGCGGGTGAAGAAGAGCCTCAGCTGGGAACAGAAAGCCGTGCCCTTGTTTGCATAAAGGGAATAAATGTTGAGATCTTTGTTCAGTGGCTAGTA AATGCATTGACTCATGTGGATGAGTCACTACGTCTTGATGCTGCTGAGTCTCTTTTCTTAAACCCCAAGACTGCAAGTCTACCTTCTCATTTAGAGCTAA CTTTAATGAAGGAAGCCGTGCCTTTGAATATGAGGTGTTGCTCCACAGCTTTTCAGATGAAGTGGAGCAGCTTGTTTCGAAAATTCTTTGCTAGGGTTCG AACAGCCCTGGAGAGACAATTCAAGCAAGGTAGCTGGAACCCTCTTGAGCATATTAAAGGTAACAGAGTTTATTCTTCAAACGGGAATAATGAAATGACA ACCAAAAGAGCAGATGATCTTTTTCACTTTATGAGGTGGCTGAGTTGCTTCTTATTTTTCTCATGCTATCCTTCTGCTCCTTACAAGAGAAAAATAATGG CAATGGATCTCATCTTGATTATGATAAATGTCTGGTCTATTAAACCATCAATTAGTGAGAAGTCTGATAGTTCTTTGTCAGGAGATCATCTCTATCCTTA CAGCAAAGGAATGACTTCATCCGATTCAACTCTTCTGTTAGTTGGTTCAATTGTTGATAGTTGGGATAGGTTGAGAGAGAGTTCGTTTCGCATATTACTT CATTTTCCGACTCCACTACCTGGAATTTCTGGTGATGACATGCTGAAGAAGGTAATTGCATGGGCTATGAAATTAGTTTGCAGTCCACGTGTAAGGGAAA GTGATGCCGGAGCTCTGACTTTGCGGCTAATATTTAGGAAGTACGTCCTGGAGCAAGGTTGGTTGATTGAAGATCCATTTAATGTTGTCAATTTAAGCTC AAAGCCTGAATTGGTAAATGAGGCTAATCAGTCAAGTAATCTTAGGATTCCTGTCATACTGTATATGAAATCAATGATCGATTGGTTGGATGTTGCTGTG AGACATGGGGAAGAAGATCTTTCTAAAGCATGCAGGAACAGCTTTGTCCATGGTGTATTACTTGCTTTGCGTTATGCTTTTGAGGAATTAGACTGGGATT CTGATGTCCCATTGTCTAGTATCTCAGAGATGAGGTATTTGTTGGAAATACTTTTGGAGCTTGTAATGAGGATAACTTCATTGGCACTATGGGTAGTTTC TGCAAATGCTTTGCATCTGCCTGAAGACATGGATGATATGGATGATGACGACAATCTTTTGTCAGAGATACCGGATCATGAGCATGAGCACATGTATTCA TCTGAACATGAGAACAGTAATTCAAAGCCTTCCCATGATGTCAAAGCATCGGAACAGATTGTCATGGTTGGTTGCTGGCTGGCTATGAAAGAGGTACTTA TCTTGAACAGCGTGTAGAAACTTTTGATTTCATTGGGTAATAGGGTTAGGGTATTGATTCTTTGAAAAGGTAGAGCAGAAAGAATACAGTTCCAGGTTAT CATTAATTTTTTTTGACTGATTATGTTTCTCTCTCAAAATTACCTGCTTAAAATTCTAGAAATGATGTGAAGGAAACATATTGTAAATAATAGCATATTA TTTGTTTCAAGCAAGAATTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_187079; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295028
| Blastp | Thyroid adenoma-associated protein homolog from Canis with 17.9% of identity |
|---|---|
| Blastx | - |
| Eggnog | thyroid adenoma associated(COG5543) |
| Kegg | Link to kegg annotations (100126180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442647.1) |
| Pfam | Putative death-receptor fusion protein (DUF2428) (PF10350.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |