Id Trinity | TRINITY_DN51717_c0_g4_i5 |
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Name Transcript | Ll_transcript_297330 |
Sequence | CTATATATGATGCAGCTGCTATACTCACTTCTATCCAGTCTTTGCTTTGTGATCCCAACCCAAATTCACCCGCAAACTCAGAAGCAGCTCGAATGTTTAG TGAGAACAAGCGCGACTACAATCGAAGGGTGAGGGAAGTTGTGGAGCAGAGTTGGACAGCCGACTAAGGCATGGATAGGTAGACATATTCATAATTGCGT TGTGGTCACGAAGGAGTCAGAATGGCGATGAGGCCCAAAAGCGTTACTACCTATTCTCCCCTCTCTCTCACGCTTCAACCTCTGCGCGTGTTAAGACACG GGGGCATGAGAGTCATCGTAAATGTTTGGGAATAAAGTTTTTTTTTATCGGCAATTTTTTAGAATGTAAATGTTAGTATTTTATTGTGGGTGACACACCA CCTCAACCTCTTTCATTCTAATTATCAAATTACGTTATATCTCCTCGGTTGGGAATAAAGATTGAAGATGGTAGAATAAAACTTTGTTTTGAAGTGACTT CAGTTGAACTCTCTGAAATAAACAACCCCACCTGCCACCTCACTCTCTTTCGTGTCATTACATCCACTCAACTTCCCATACCCACTCTTTCATCAAACCA TTGACTAACATCAACGGTTCAAAACCTATCAACTCATCCAATCCAACGGTGTCAACGAGCTTTCAACACCTCGTGATTTCCCCACAACTTATCCAACCTC TTTTCATATATTCTTATTTTCAAAAGAGATAAAAATAAATAGACTGACAGTATATTATTATTGATTTTTTCTATTATTGTTGACTTGAAAAAGCAATTTA AATGAATGATAGATGATAAAATGCATATGAATAAATGTTTACACTCTTTTAAAAAATATTTTGAGTGTTCCAGCTAGCAAAGTTTACAGAGTGAACAACA CAAGGTAACAAAATAAATGCACCTTTAGATCTCTCTATCTCTCTATCTCTCTCTCTTCCATGGTACATTCTCCACTCTTCTTCTCTCTACTCTTCTTCTC CACTCCATTGTAATATATTTTAATATTACTTTGATTTTGTAATCTCATAGTTTTGGCTGTGCTTGACAGGAATAGTAAGTAGATTCGAGGTTCCACATTG CTTAGGTAACTTCTTAAGATCTACTACCTCATATCACCAATTCCAATAACTCATTCAAGGATCCACCACTATTCTGTGTTCCAGATCTTGTGTTTTACTT TGCCTTCTACCATTCTTCTTACTTTCCTCACTGCGTTTGTGATTCATTTTCATTTTTCAACTACCTCTACTTATTTGTTTGTTACATTACGTCATGTCCT TGTTACTTCATTTCCTCGTATGTTTTTTTTTTTTTTTCTTCTTCATTAATTACTGCTAAATTATAATTATTTAGATTTGTGGCAAAAAACAGCATGTTTG TCAAGCAGATCCAGAGATCAAAACTAATTCCCTTGTATTTGTTGTGTTTTTTTTTTGCTTCTAAGAATTGATCTTCGTACGGCATTATTGTCGGTGGTTG TATTTTTTGTTGTTGGAAGTTACAAATAAGTCAAATGAGTGACGGCGTAACCAACATGGTACATCGCTCATGATGTCTATTTACTGTTGTTAGTTCATTG CTCATTATTTCTCTTCAATATCAGTACCCTGTGTTTAATTTTTTACCCAAGTTTTTAGTAGGCTAATCATTATTTTACTCTGATTGTTGCATATCCATTT AGCTTTTAACAGAAATATGACAGTCATTAAGGAAAACTATTTATCTCTGACTGTAACAATATCCTTATACAAAATAAAAAGGCGGTGTTCCATTTCATCC AGCAAATTTTACTTAGGGGTGAAAAAGTTAGTGTTATCATATTAAATTAAATTGAATCAAATTAAATGATGTGTCATTACAAGGTACACTTTGTTAAATG GGCACAGCTAAAAAATATATTTTCCTATAGGATAATTTATTTCTTGTTTTTTATATCATCTTTGTTATCTTTCAGAACATATACTTGAATCTTACTCCAA AAAAAACAACTTTTTTAGTTTCTAGAATTCCTAAAATCATGTCTTTAACTTATAATCATCACATTTTGTTGTTACAAATACTTTAGCTAAAGAATTGAGT AACAGTGCACTGCTTATTTTCAGCTCACTGACTAAAGTAATTCATTTTTGTGACCTTGTTAAGCAGGCATCTTGCATGATTTTAGGATTTATTCTTGTTT TCTGGTTGGCATTGTTTAATCACTTGCTTATTTAAAATTATGAATTATGAAACAGTAAGCACAGGATCACTGTATGAATTAGTTTCATTCCCGCTCTCCC TGTTACAGGATCTGGTCTCGCAATGGGGAAGTCACCGGCAAAATGGATAAAAAATGTACTGTTTGGAAAAAAGTCATCCAAATCAAATGTTTCAAAAGGA AGAGAGAAACTTGTTAACCAAACAGAAGGAGTGGTTCCTTCAAAGTTGTCAGAAACTGGTTTGGCTTTAGATCCGACCCCAAATATTAATGCCAGAAATG AGGAAGACCCACGACTGCAGGATAAAGAAGCAGAAAATGTTTTACCTGGAAGTCAAGAAATAGACACAGTAGAATCTGTTCAACAAGATGCTCCACTTGA TCCAGAGAAAATAAGGCTGGGGGAAGCAGCAACAAAGGCACAGGCTGCATTCAGAGGTTACTTGGCTCGACGGGCATTTAGGGCCCTAAAAGGCATAATA AGGTTGCAAGCACTTATTCGTGGGCACCTGGTTAGGAGACAAGCTGTCGCCACATTATGCTCTGTGTATGGGATTGTCAAGTTACAAGCACTTGTTCGTG GAAGAAGAGTAAGACTGTCTGAAGTTGGATTTGAAATCCATCAGAAGTGCACTCTATTGAAACCTCTGGTAATGTTTGTCAAGAACCATTTTCTATGTAA TTTATCATTAAATTGTCATATTATTATACTATTCATGTTGTTTTTATCATGGTCAAATTAGATCTAAATGGTTTATTAATCTAAGAAATGAATGGGCTTA TGTTGAAACAACACATTCAAATGACGTCTTGCTGGGAAAATAAATGGGCTTATGTTGAACTATTTACTACTAGAAGAACTTAGGTGGTCTGGTCTTGTCA TCCAGTACATTTTTATTTTAATCATAAGAAGTCAGTGCATCATATAAGATTTTAGGGTCTGCTTTCAAGGTGTTCTGGACCACATTTTGTATAAAATCAA GATGAAATATTAGTATGAGCAGAGTAGCAGACTATCTCTATTTATCAAACATGAAACAATTTGAGAAATTTTTAATAAGTATCGTTTAGTTGTTGGGTGG TGAACCAGTTAGGTGTTCTTAGATAGTTGATGGCTTCAGGTTTATGAGTGTATGACAAGTCAGTGAGGAGAGAGGAAGGGGAAGATTGCATCTACAATAT TTTGTTTACTGTTGCCAACCCACCTAGTGGGATAAAGGCTTGGTTGTTGTTGTTGTTGTTGTTGTTGCTACTGATGATGTTTTGCCTTCTAAATTTGTTG TGGCTTAGGATGGCAAACATGTCATGCCAAATGATATATCTACAAAAATTATGAAGCTGTCAGCAAATGCTTTCATCCGTAAGGTATTTTACATTACACC TTGGAATTATTATGTAGCAACATAATTTTAAATATAAGAAGATAGAAATTGAATCCCCACGAGAGAATGACATTGTTTTTCAAGCAGTGAGCGAGGCCAA TCTTCTGACGGAATGAGACAGTACTGACCTACTAAGTTTTCTCAACGGGGAATTAAGTTCCAAGATTGCAATTATTTGCTATACGAACATTATTAGTTTC ATCAGATAACGGTATCTTTTATTTATGCAATACTAAACCAGAAAATTATTCCATAATAACTATACTTCCCTTCTAAGTCCTGAATTACAGAACTTCAACT GATGAGCATGTTTAGTTTTTATGTGGCACCTCAGGGCTAGGCAATTTCTTTCTTAATTACTTCAGTAATTCATTGTTGACATGAAGATGTGAATATATCC TACCATAATTTTAGTTTGGTTAAATCTGCAATTGAATTGGTTTCTTTTCACATATATTGTTTTACCAACTTTCTGGAGCACATACTTATATACGCCTTGA CTGTCAGTTAAAGTGTTCATGTAAAAACGTTGCTCTGTTGTTTCAGCTTCTTGCTTCATCTATTATAATAATGCCCCTGCATTTGCAATATGTTCCTGGT GATCCAAATTCAGTCCTGAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAAACCAGTTACACAACCCAAGAAAATTCGAGACATTAAGTCTCAGA GAAAGCAAGATAATATTTCAATTGGGGAAGCTCAAGTGAGCAAATCGAAACGTACCAACCGGAAGTTTCCTACTTCAAATTTTGACTCGGTTCCAGTGCA ACCAAATCCTGAACTTGAGAAACCAAAACGGAACTTTCGGAAAATTTCAAGCCAATCCTCAGATCCTGTGCAGGAAAATCCACAAATTGAGCTTGAAAAG ATTAAGCGAAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATAATGTCCCGTCAGAAGTTGAGTCTGAGACCTCAAAGCAGCATTTGGAAAAGGCAA TGGTTAACTCTGTTCATGTTGGTGTTTCAGAACAAGGGATTATGAGTTCCAATGAGAAGATCAAGAAAGAAGC BLAST |
Tissue | pods |
Gene name | LI_gene_187114; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297330
Blastp | Protein IQ-DOMAIN 31 from Arabidopsis with 56.25% of identity |
---|---|
Blastx | Protein IQ-DOMAIN 31 from Arabidopsis with 51.03% of identity |
Eggnog | IQ-domain(ENOG410YAVA) |
Kegg | Link to kegg annotations (AT1G74690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463745.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |