Id Trinity | TRINITY_DN51717_c0_g4_i8 |
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Name Transcript | Ll_transcript_297334 |
Sequence | CTATATATGATGCAGCTGCTATACTCACTTCTATCCAGTCTTTGCTTTGTGATCCCAACCCAAATTCACCCGCAAACTCAGAAGCAGCTCGAATGTTTAG TGAGAACAAGCGCGACTACAATCGAAGGGTGAGGGAAGTTGTGGAGCAGAGTTGGACAGCCGACTAAGGCATGGATAGGTAGACATATTCATAATTGCGT TGTGGTCACGAAGGAGTCAGAATGGCGATGAGGCCCAAAAGCGTTACTACCTATTCTCCCCTCTCTCTCACGCTTCAACCTCTGCGCGTGTTAAGACACG GGGGCATGAGAGTCATCGTAAATGTTTGGGAATAAAGTTTTTTTTTATCGGCAATTTTTTAGAATGTAAATGTTAGTATTTTATTGTGGGTGACACACCA CCTCAACCTCTTTCATTCTAATTATCAAATTACGTTATATCTCCTCGGTTGGGAATAAAGATTGAAGATGGTAGAATAAAACTTTGTTTTGAAGTGACTT CAGTTGAACTCTCTGAAATAAACAACCCCACCTGCCACCTCACTCTCTTTCGTGTCATTACATCCACTCAACTTCCCATACCCACTCTTTCATCAAACCA TTGACTAACATCAACGGTTCAAAACCTATCAACTCATCCAATCCAACGGTGTCAACGAGCTTTCAACACCTCGTGATTTCCCCACAACTTATCCAACCTC TTTTCATATATTCTTATTTTCAAAAGAGATAAAAATAAATAGACTGACAGTATATTATTATTGATTTTTTCTATTATTGTTGACTTGAAAAAGCAATTTA AATGAATGATAGATGATAAAATGCATATAAATAAATGTTTACGCTCTTTTAAAAAATATTTTGAGTGTTCCAGCTAGCAAAGTTTACAGAGTGAACAACA CAAGGTAACAAAATAAATGCACCTTTAGATCTCTCTATCTCTCTCTATCTCTCTCTTCCATGGAATAGTAAGTAGATTCGAGGTTCCACATTGCTTAGGT AACTTCTTAAGATCTACTACCTCATATCACCAATTCCAATAACTCATTCAAGGATCCACCACTATTCTGTGTTCCAGATCTTGTGTTTTACTTTGCCTTC TACCATTCTTCTTACTTTCCTCACTGCGTTTGTGATTCATTTTCATTTTTCAACTACCTCTACTTATTTGTTTGTTACATTACGTCATGTCCTTGTTACT TCATTTCCTCGTATGTTTTTTTTTTTTTTTCTTCTTCATTAATTACTGCTAAATTATAATTATTTAGATTTGTGGCAAAAAACAGCATGTTTGTCAAGCA GATCCAGAGATCAAAACTAATTCCCTTGTATTTGTTGTGTTTTTTTTTTGCTTCTAAGAATTGATCTTCGTACGGCATTATTGTCGGTGGTTGTATTTTT TGTTGTTGGAAGTTACAAATAAGTCAAATGAGTGACGGCGTAACCAACATGGTACATCGCTCATGATGTCTATTTACTGTTGTTAGTTCATTGCTCATTA TTTCTCTTCAATATCAGTACCCTGTGTTTAATTTTTTACCCAAGTTTTTAGTAGGCTAATCATTATTTTACTCTGATTGTTGCATATCCATTTAGCTTTT AACAGAAATATGACAGTCATTAAGGAAAACTATTTATCTCTGACTGTAACAATATCCTTATACAAAATAAAAAGGCGGTGTTCCATTTCATCCAGCAAAT TTTACTTAGGGGTGAAAAAGTTAGTGTTATCATATTAAATTAAATTGAATCAAATTAAATGATGTGTCATTACAAGGTACACTTTGTTAAATGGGCACAG CTAAAAAATATATTTTCCTATAGGATAATTTATTTCTTGTTTTTTATATCATCTTTGTTATCTTTCAGAACATATACTTGAATCTTACTCCAAAAAAAAC AACTTTTTTAGTTTCTAGAATTCCTAAAATCATGTCTTTAACTTATAATCATCACATTTTGTTGTTACAAATACTTTAGCTAAAGAATTGAGTAACAGTG CACTGCTTATTTTCAGCTCACTGACTAAAGTAATTCATTTTTGTGACCTTGTTAAGCAGGCATCTTGCATGATTTTAGGATTTATTCTTGTTTTCTGGTT GGCATTGTTTAATCACTTGCTTATTTAAAATTATGAATTATGAAACAGTAAGCACAGGATCACTGTATGAATTAGTTTCATTCCCGCTCTCCCTGTTACA GGATCTGGTCTCGCAATGGGGAAGTCACCGGCAAAATGGATAAAAAATGTACTGTTTGGAAAAAAGTCATCCAAATCAAATGTTTCAAAAGGAAGAGAGA AACTTGTTAACCAAACAGAAGGAGTGGTTCCTTCAAAGTTGTCAGAAACTGGTTTGGCTTTAGATCCGACCCCAAATATTAATGCCAGAAATGAGGAAGA CCCACGACTGCAGGATAAAGAAGCAGAAAATGTTTTACCTGGAAGTCAAGAAATAGACACAGTAGAATCTGTTCAACAAGATGCTCCACTTGATCCAGAG AAAATAAGGCTGGGGGAAGCAGCAACAAAGGCACAGGCTGCATTCAGAGGTTACTTGGCTCGACGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGC AAGCACTTATTCGTGGGCACCTGGTTAGGAGACAAGCTGTCGCCACATTATGCTCTGTGTATGGGATTGTCAAGTTACAAGCACTTGTTCGTGGAAGAAG AGTAAGACTGTCTGAAGTTGGATTTGAAATCCATGAGAAGTGTAATCTATTGAAACCTCTGGATGGCAAACATGTCAAGCCAAGTGACATGTATACAAGA ATTACAAAGCTCTCTGTAAATGCTTTCATCCGTAAGCTTCTTGCTTCATCCATTGTTATATTGCCCCTGCGTTTGCAATATGTTGCTGGCGATCCAAATT CAGTCTTGAGTTGGTTGGAGCGCTGGTCAGCATCTTGCTTTTGGAAACCAGTTATACAACCCAAGAAAACCCGAGACATTAAGTCTCAAAGAAAGCAAGG TAATAATTCAATTGGAGAATCTCAAATGAGTAAGTCAAAGCGTACCAACCGGAAGCTTCCTACTTCAAATTTTGACTCGGTTCCAGTGCAAGCAAATCTC GAACTTGAGAAACCAAAACGAAACATAA BLAST |
Tissue | pods |
Gene name | LI_gene_187114; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297334
Blastp | Protein IQ-DOMAIN 31 from Arabidopsis with 50.63% of identity |
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Blastx | Protein IQ-DOMAIN 31 from Arabidopsis with 50.63% of identity |
Eggnog | IQ-domain(ENOG410YAVA) |
Kegg | Link to kegg annotations (AT1G74690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463745.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |