| Id Trinity | TRINITY_DN51717_c0_g4_i9 |
|---|---|
| Name Transcript | Ll_transcript_297335 |
| Sequence | CTATATATGATGCAGCTGCTATACTCACTTCTATCCAGTCTTTGCTTTGTGATCCCAACCCAAATTCACCCGCAAACTCAGAAGCAGCTCGAATGTTTAG TGAGAACAAGCGCGACTACAATCGAAGGGTGAGGGAAGTTGTGGAGCAGAGTTGGACAGCCGACTAAGGCATGGATAGGTAGACATATTCATAATTGCGT TGTGGTCACGAAGGAGTCAGAATGGCGATGAGGCCCAAAAGCGTTACTACCTATTCTCCCCTCTCTCTCACGCTTCAACCTCTGCGCGTGTTAAGACACG GGGGCATGAGAGTCATCGTAAATGTTTGGGAATAAAGTTTTTTTTTATCGGCAATTTTTTAGAATGTAAATGTTAGTATTTTATTGTGGGTGACACACCA CCTCAACCTCTTTCATTCTAATTATCAAATTACGTTATATCTCCTCGGTTGGGAATAAAGATTGAAGATGGTAGAATAAAACTTTGTTTTGAAGTGACTT CAGTTGAACTCTCTGAAATAAACAACCCCACCTGCCACCTCACTCTCTTTCGTGTCATTACATCCACTCAACTTCCCATACCCACTCTTTCATCAAACCA TTGACTAACATCAACGGTTCAAAACCTATCAACTCATCCAATCCAACGGTGTCAACGAGCTTTCAACACCTCGTGATTTCCCCACAACTTATCCAACCTC TTTTCATATATTCTTATTTTCAAAAGAGATAAAAATAAATAGACTGACAGTATATTATTATTGATTTTTTCTATTATTGTTGACTTGAAAAAGCAATTTA AATGAATGATAGATGATAAAATGCATATAAATAAATGTTTACGCTCTTTTAAAAAATATTTTGAGTGTTCCAGCTAGCAAAGTTTACAGAGTGAACAACA CAAGGTAACAAAATAAATGCACCTTTAGATCTCTCTATCTCTCTCTATCTCTCTCTTCCATGGAATAGTAAGTAGATTCGAGGTTCCACATTGCTTAGGT AACTTCTTAAGATCTACTACCTCATATCACCAATTCCAATAACTCATTCAAGGATCCACCACTATTCTGTGTTCCAGATCTTGTGTTTTACTTTGCCTTC TACCATTCTTCTTACTTTCCTCACTGCGTTTGTGATTCATTTTCATTTTTCAACTACCTCTACTTATTTGTTTGTTACATTACGTCATGTCCTTGTTACT TCATTTCCTCGTATGTTTTTTTTTTTTTTTCTTCTTCATTAATTACTGCTAAATTATAATTATTTAGATTTGTGGCAAAAAACAGCATGTTTGTCAAGCA GATCCAGAGATCAAAACTAATTCCCTTGTATTTGTTGTGTTTTTTTTTTGCTTCTAAGAATTGATCTTCGTACGGCATTATTGTCGGTGGTTGTATTTTT TGTTGTTGGAAGTTACAAATAAGTCAAATGAGTGACGGCGTAACCAACATGGTACATCGCTCATGATGTCTATTTACTGTTGTTAGTTCATTGCTCATTA TTTCTCTTCAATATCAGTACCCTGTGTTTAATTTTTTACCCAAGTTTTTAGTAGGCTAATCATTATTTTACTCTGATTGTTGCATATCCATTTAGCTTTT AACAGAAATATGACAGTCATTAAGGAAAACTATTTATCTCTGACTGTAACAATATCCTTATACAAAATAAAAAGGCGGTGTTCCATTTCATCCAGCAAAT TTTACTTAGGGGTGAAAAAGTTAGTGTTATCATATTAAATTAAATTGAATCAAATTAAATGATGTGTCATTACAAGGTACACTTTGTTAAATGGGCACAG CTAAAAAATATATTTTCCTATAGGATAATTTATTTCTTGTTTTTTATATCATCTTTGTTATCTTTCAGAACATATACTTGAATCTTACTCCAAAAAAAAC AACTTTTTTAGTTTCTAGAATTCCTAAAATCATGTCTTTAACTTATAATCATCACATTTTGTTGTTACAAATACTTTAGCTAAAGAATTGAGTAACAGTG CACTGCTTATTTTCAGCTCACTGACTAAAGTAATTCATTTTTGTGACCTTGTTAAGCAGGCATCTTGCATGATTTTAGGATTTATTCTTGTTTTCTGGTT GGCATTGTTTAATCACTTGCTTATTTAAAATTATGAATTATGAAACAGTAAGCACAGGATCACTGTATGAATTAGTTTCATTCCCGCTCTCCCTGTTACA GGATCTGGTCTCGCAATGGGGAAGTCACCGGCAAAATGGATAAAAAATGTACTGTTTGGAAAAAAGTCATCCAAATCAAATGTTTCAAAAGGAAGAGAGA AACTTGTTAACCAAACAGAAGGAGTGGTTCCTTCAAAGTTGTCAGAAACTGGTTTGGCTTTAGATCCGACCCCAAATATTAATGCCAGAAATGAGGAAGA CCCACGACTGCAGGATAAAGAAGCAGAAAATGTTTTACCTGGAAGTCAAGAAATAGACACAGTAGAATCTGTTCAACAAGATGCTCCACTTGATCCAGAG AAAATAAGGCTGGGGGAAGCAGCAACAAAGGCACAGGCTGCATTCAGAGGTTACTTGGTAAGTAACTTACTGTTCTATATACTCAACTGATTAAATTGTA AGCGTGTTTCAGTCTGAAAAAAATTAATTTTTTTTGAAGTGTAACATGAAGAAGATACTTTGATGTAAAGTGAAAAAAGGATAATAAATATCCTGTTAGA TTGTAAGTTTAAATATTGATAGCATCTGACATGAAGCCTTTGGCGGATCAATAAACAAAGAAGTTAATAAGATTTAATGTTTATAGAGCACTATTTTGAA GTTCAGTGCATTGTTCAGTTTGATTTACTTCCCGGGACTTCTATAATTTGTCTCTCTCCCTGTCTTCTCTCCTTATTGATGGAAATGAACTCCACCTGCT TCCCACTGCGATGAAACTGCTGGCAGAAAACCTTATCTCGTCAACAATCTTGTTGCAGTTTTGGCTGTATTAGTTCTTGTAAATTATAATATTTGATAAT ATGCCAGAACTAATGGAAGCATCTTTCATGAAGGCTCGACGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTGG TTAGGAGACAAGCTGTCGCCACATTATGCTCTGTGTATGGGATTGTCAAGTTACAAGCACTTGTTCGTGGAAGAAGAGTAAGACTGTCTGAAGTTGGATT TGAAATCCATCAGAAGTGCACTCTATTGAAACCTCTGGTAATGTTTGTCAAGAACCATTTTCTATGTAATTTATCATTAAATTGTCATATTATTATACTA TTCATGTTGTTTTTATCATGGTCAAATTAGATCTAAATGGTTTATTAATCTAAGAAATGAATGGGCTTATGTTGAAACAACACATTCAAATGACGTCTTG CTGGGAAAATAAATGGGCTTATGTTGAACTATTTACTACTAGAAGAACTTAGGTGGTCTGGTCTTGTCATCCAGTACATTTTTATTTTAATCATAAGAAG TCAGTGCATCATATAAGATTTTAGGGTCTGCTTTCAAGGTGTTCTGGACCACATTTTGTATAAAATCAAGATGAAATATTAGTATGAGCAGAGTAGCAGA CTATCTCTATTTATCAAACATGAAACAATTTGAGAAATTTTTAATAAGTATCGTTTAGTTGTTGGGTGGTGAACCAGTTAGGTGTTCTTAGATAGTTGAT GGCTTCAGGTTTATGAGTGTATGACAAGTCAGTGAGGAGAGAGGAAGGGGAAGATTGCATCTACAATATTTTGTTTACTGTTGCCAACCCACCTAGTGGG ATAAAGGCTTGGTTGTTGTTGTTGTTGTTGTTGTTGCTACTGATGATGTTTTGCCTTCTAAATTTGTTGTGGCTTAGGATGGCAAACATGTCATGCCAAA TGATATATCTACAAAAATTATGAAGCTGTCAGCAAATGCTTTCATCCGTAAGGTATTTTACATTACACCTTGGAATTATTATGTAGCAACATAATTTTAA ATATAAGAAGATAGAAATTGAATCCCCACGAGAGAATGACATTGTTTTTCAAGCAGTGAGCGAGGCCAATCTTCTGACGGAATGAGACAGTACTGACCTA CTAAGTTTTCTCAACGGGGAATTAAGTTCCAAGATTGCAATTATTTGCTATACGAACATTATTAGTTTCATCAGATAACGGTATCTTTTATTTATGCAAT ACTAAACCAGAAAATTATTCCATAATAACTATACTTCCCTTCTAAGTCCTGAATTACAGAACTTCAACTGATGAGCATGTTTAGTTTTTATGTGGCACCT CAGGGCTAGGCAATTTCTTTCTTAATTACTTCAGTAATTCATTGTTGACATGAAGATGTGAATATATCCTACCATAATTTTAGTTTGGTTAAATCTGCAA TTGAATTGGTTTCTTTTCACATATATTGTTTTACCAACTTTCTGGAGCACATACTTATATACGCCTTGACTGTCAGTTAAAGTGTTCATGTAAAAACGTT GCTCTGTTGTTTCAGCTTCTTGCTTCATCTATTATAATAATGCCCCTGCATTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTGAGTTGGTTGGAGC GCTGGTCAACATCTCACTTTTGGAAACCAGTTACACAACCCAAGAAAATTCGAGACATTAAGTCTCAGAGAAAGCAAGATAATATTTCAATTGGGGAAGC TCAAGTGAGCAAATCGAAACGTACCAACCGGAAGTTTCCTACTTCAAATTTTGACTCGGTTCCAGTGCAACCAAATCCTGAACTTGAGAAACCAAAACGG AACTTTCGGAAAATTTCAAGCCAATCCTCAGATCCTGTGCAGGAAAATCCACAAATTGAGCTTGAAAAGATTAAGCGAAACTTGAGAAAGGTTCATAACC CAGTTGTTGAGAATAATGTCCCGTCAGAAGTTGAGTCTGAGACCTCAAAGCAGCATTTGGAAAAGGCAATGGTTAACTCTGTTCATGTTGGTGTTTCAGA ACAAGGGATTATGAGTTCCAATGAGAAGATCAAGAAAGAAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187114; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297335
| Blastp | Protein IQ-DOMAIN 31 from Arabidopsis with 56.25% of identity |
|---|---|
| Blastx | Protein IQ-DOMAIN 31 from Arabidopsis with 54.89% of identity |
| Eggnog | IQ-domain(ENOG410YAVA) |
| Kegg | Link to kegg annotations (AT1G74690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463745.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |