| Id Trinity | TRINITY_DN51718_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_295893 |
| Sequence | GTCCTCTCTCTTATCTAATCCTCTACTATCCACACAAACAAAGCTTAAGAGAGAAGATTAAATAAACCAAAACCCACACTTGTTCTCATATTCCTTTCGT CACCATCACCATTACCATTCATTATCACCATTATCATCACCACCTTCCTCTCTTTTTCTTCTATCGTTCCTGTTTTTTCTCAAAACCCTCTTCATTATTT TCCCTTTTCTCACTCTTCTTCTATTCCTCTCAATTTTCCCCAATTCATATGATCCCTCAGGTGATAAATAACCTAATTCACCCTTCTTTTCTTCATTCAA CGCTGTCCATTATTTACACCCCCTCTTCATTCAATTAGCTTCATTCCCATTCCACGGTACGAAAAAATCTTATTTTTTGGGGAAAAATCGTATTTTTTTT GTGTTCGAACCCAAACTTATAAAATAGAAGAGAAAGAGGAAAGGTTAATTGATTGAAGATTAGGGTTTTTTTGTTTTGTGAAAAAAGATGGAAACTTTGG ATGGTAATTCAAACCGGTATGCTACCATTTCTTCTAATTCATCATCAGCATCATCTTCTGGAGGTGTTAATAGTAATGATAACAATGCTAATAGTGGTAG CAGTTCTGGCATTGTAAACTGGTATGGTGTGAATTTGCCTTCTGTGAGAACTTTGCGTTCTCCACTTTCGTATTTATTGGAGCACACTGGCATCCTAACC TCAGGTCCTCCTTCTGAGAATGTAATTGTCAACAATGGAGTTACGGGTTCGGAGTTACGGTCTCAGCTTCAAAATCAATCACTTGATGGTGGTGGTGGTG GTGATGTTGGAACACCCTGCACGAATAGGGCTGGTGAAGTTGCAATAAGGATCATTGGAGCTGGAGAGAATGATCACAATGTGGTAGGGTCTGGTACTCC TTCATCCTCGTCATGGAATCGGCGCGGAGAAGCTAGTTATGGTGGTTATGATGATGTAGTGAGTGGTAGAGATGGAATGCCTGGATTGGTTGTTAGCGGT GGTGGTGAGGATCATGGTGGAATTGCTGCTGGCCCGAGGGTTCCTCGGGTGTCTTCGTCTTCGACTTTGGCTGGTAGTGGACAAGTTGGTGGGAATGCAA CTGGGAATGGGTTAGAAAGTAACGGTAGGGAGTCGTCATCCTACCAGAGGTATGATATTCAGCAGATAGCAAAGTGGATTGAGCAGATTCTGCCTTTTTC ACTCTTGCTGTTTGTTGTTTTCATCCGTCAGCATTTGCAAGGTACAACCACTACTTGTTCCTATTGGTAATATTATGTGCACAATGGCAATTTTGGCTTC AAAGGTTCCTCCTAGGGTACTAATGAAATCATAGGCATTGTGCATTTCCCTTTGTTTACTTTCTATTTACTTTTAGTACATTAATTGACAAAATATCGGG AGAATTGTTTCTGATGTAAGTATAGGCTAGACTTTGATGATATGACCATACCAAGCCCATAGCTAATTTGTTTAGGGTGTGCTTTCTTCACCATGTTCTT CATAGTCTTACATTCATATTACTTAGGTCTTAGTTGCCTGTTTTTTTAGAGCCCTGGTTGTTTGTCGTCAAGGAATGTGCTTGTTTGAATAATGGTATGG CGAAGAGTGGATTAATGAAAACTATGGAATTCAATTTTTTTTTAATTCATTTTGGTGTTGCTACCTTGCTAAGTGTTATCGATTAATACCAAATTACCAA CCAAACAATTCTGCCACGGCTGACAACACTGCATGTTTTCCATGAGGAAAGGCGTAGAAGAAAAGATCATCTCGTAATTTTTTTAGTATCACCAATCATG TGGATTGTGCTCTCTTTTGTTTACCATTTCTCCATTTGGTAGCATCCCACGTTTGTAAGGAAGTTGCAGCTTTGCTAATTGTAAGTAAGGTAAATACATG GAAGGGTTAACAAAACAATGATCCCTATCTGCCGTGTGAGTTGTGATTGTCTCTTTTATTTTTTGCAACCGCTTCCTCCCTTTTGAGAAGTTGCATGATG AACTGCTTCTCACACATAGTTTCAGTGTCCTCTTAATTTTTGCTTTTGATAATTTCCGTATTAGTTGGTGATATTCATTTCCAAGAGTTTGCAGGTTTCT TTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAAAGGCAGACAGCATTGAAGGGAGATAGGAGAGTATCTATCCTTGTTGG CATCTCAATTGCCTTCATGCTTCATGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCGCTGATCATGATTCCCCCAAAAGCTACA CCTTTTTGGCATTCAATATTCATCATTTTGGTTAATGATACATTGATGCGGCAAGCAGCAATGGCTTTCAAGTGTTTTCTGCTTATATATTACAAAAATG GCAGAGGTCAAAACTTCCGTAGGCAGGCTCAAATGTTGACTCTGGTTGAGTACACATTGCTGCTGTATCGTGCCTTGCTGCCCACACCAGTTTGGTACCG GTTTTTCTTGAACAAGGATTATGGCAGTCTCTTTTCGTCACTGACCACTGGGTTGTATTTAACTTTCAAACTAACATCTGTTGTTGAGAAGGTTAAAAGC TTTTTTTCTGCCTTGAAAGCGCTATCAAGAAAGGATGTTAACTATGGGGTTTGTGCCACAATGGAACAGGTTAATGCTGCTGGTGACCTATGTGCTATAT GCCAGGAGAAGATGCATGCCCCCATCTTGTTGCGCTGTAAACACATTTTCTGCGAAGAGTGTGTATCAGAATGGTTTGAGAGAGAAAGGACATGCCCACT CTGTAGAGCATTGGTAAGACCTGCTGATCTGAGGACATATGGAGATGGATCTACAAGTCTCCTATTTCAGTTGTTCTAAACTCATGTTCTTTGGGTTGGA TCATAGTTCTGTCCCAACCTTTACCTCAAAAGTATCATGTTTAGTACTCTGATTTGGTCAAAAAAAATTCATCAACACATTTTCTTGTAATGATGTCACA TGTACAAACATGATATTCCTCATGTCTAGGCAAATATGGTGAACACAAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187120; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295893
| Blastp | - |
|---|---|
| Blastx | RING finger and transmembrane domain-containing protein 2 from Homo with 30.37% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456530.1) |
| Pfam | - |
| Rfam | - |
| GO | - |