| Id Trinity | TRINITY_DN51718_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_295897 |
| Sequence | TTTCTTGACCTCCACCATGATCATTCATTATCATCATCCTCATTTTCTGCCACCGTTCCTGCTTTTGCACTAAACCCTTTTCAATCTTCTCTCCCTTTCT TTCTCTTCATCCCCTTTTCAATTTTTATATCATCTCTCAGCTAATAACCTAATGCACCCTTCTTCTCTTTTTTCCATTTCCTCTTCTTTCTGACCCTTTC ACCTTCTTCTCTCGCAATTACCCTCTTTCTTCTTTCCGGGTACAAAAAAAATACAATTTTCGGGGGAAAAATCGCTTTTTTAATTGATGTGATCGAACCC AAAATTAAAAAAGAAGAAAAAGAGGAAAGATCAATCAATTGAAGATTAGGGTTTTTTCATTTTGTGAGAAAAGATGGAAACTTTGGATAATAATTCAAAC CAATATGCTACCATTTATCCTAATTCATCATCAACATCATCTTCTGGAGGTTTGAATACTAATGATAACAATGCTAACAGTAATAGCAGTGCTGGCACTG TAACCTGGTATGGTATGAATTTCCCCTCTGTGAGAACCTTGCGTTCCCCACTTTCCTATTTGTTGGAGCGCTCTGGAATCCTAACCTCAGGCCCTGAGCC AGAGGCAGTGATTGTCAACAATGGAGTTACCGGTTCCGAGTTACGGTCTCAGCTTCAAACCCAATCACTTAATGGTGGTGGTGCTGCTGATATTGGGACA CTCTGCACCAATAGTACTGGTGAAGTTGCAATAAGGATCATTGGAGCTGGAGAGAATGATCACAATGTTGTTGGGTCTGGTTCTCTTTCGTCGTCGTCTT GGAGTCCACGTGGAGAAGTTGGTTATGGTGATCTGATGAGTGATAGAGATGGAAGGCCTGGATTGGTTGATGATGGTGGTGGTGATGATCATGGTGAAAT TGCTAATGATGAGAGGGTTCATCGGGTGTCTTCGTCTTCGTCATTGGCTGGTAATGGACAAGTTGGTGGGGATGCTGCTGGGAATGGCTCAGAAAGCAAT GGTAGGGAGTCGTCATCATACCAGAGGTTTGATATTCAGCAGATTGCGAAGTGGATTGAACAGATTCTGCCTTTTTCGCTCTTGTTATTCGTTGTTTTCA TCCGTCAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAAAGGCAGACAGCATTGAAGGGAGA TAGGAGAGTATCTATCCTTGTTGGCATCTCAATTGCCTTCATGCTTCATGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCGCTG ATCATGATTCCCCCAAAAGCTACACCTTTTTGGCATTCAATATTCATCATTTTGGTTAATGATACATTGATGCGGCAAGCAGCAATGGCTTTCAAGTGTT TTCTGCTTATATATTACAAAAATGGCAGAGGTCAAAACTTCCGTAGGCAGGTGATTAGTATCTTCCATATACAGCATGTAATTTTCAAGTATCATTTATT TCTATATCATCGGTTTTGTGTAACTTATTTCTAGGCTCAAATGTTGACTCTGGTTGAGTACACATTGCTGCTGTATCGTGCCTTGCTGCCCACACCAGTT TGGTACCGGTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187120; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295897
| Blastp | RING finger and transmembrane domain-containing protein 2 from Mus with 23.9% of identity |
|---|---|
| Blastx | RING finger and transmembrane domain-containing protein 2 from Mus with 20.92% of identity |
| Eggnog | Ring finger protein, transmembrane(ENOG4111HH8) |
| Kegg | Link to kegg annotations (269695) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460921.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |