| Id Trinity | TRINITY_DN51718_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_295900 |
| Sequence | TTTCTTGACCTCCACCATGATCATTCATTATCATCATCCTCATTTTCTGCCACCGTTCCTGCTTTTGCACTAAACCCTTTTCAATCTTCTCTCCCTTTCT TTCTCTTCATCCCCTTTTCAATTTTTATATCATCTCTCAGCTAATAACCTAATGCACCCTTCTTCTCTTTTTTCCATTTCCTCTTCTTTCTGACCCTTTC ACCTTCTTCTCTCGCAATTACCCTCTTTCTTCTTTCCGGGTACAAAAAAAATACAATTTTCGGGGGAAAAATCGCTTTTTTAATTGATGTGATCGAACCC AAAATTAAAAAAGAAGAAAAAGAGGAAAGATCAATCAATTGAAGATTAGGGTTTTTTCATTTTGTGAGAAAAGATGGAAACTTTGGATAATAATTCAAAC CAATATGCTACCATTTATCCTAATTCATCATCAACATCATCTTCTGGAGGTTTGAATACTAATGATAACAATGCTAACAGTAATAGCAGTGCTGGCACTG TAACCTGGTATGGTATGAATTTCCCCTCTGTGAGAACCTTGCGTTCCCCACTTTCCTATTTGTTGGAGCGCTCTGGAATCCTAACCTCAGGCCCTGAGCC AGAGGCAGTGATTGTCAACAATGGAGTTACCGGTTCCGAGTTACGGTCTCAGCTTCAAACCCAATCACTTAATGGTGGTGGTGCTGCTGATATTGGGACA CTCTGCACCAATAGTACTGGTGAAGTTGCAATAAGGATCATTGGAGCTGGAGAGAATGATCACAATGTTGTTGGGTCTGGTTCTCTTTCGTCGTCGTCTT GGAGTCCACGTGGAGAAGTTGGTTATGGTGATCTGATGAGTGATAGAGATGGAAGGCCTGGATTGGTTGATGATGGTGGTGGTGATGATCATGGTGAAAT TGCTAATGATGAGAGGGTTCATCGGGTGTCTTCGTCTTCGTCATTGGCTGGTAATGGACAAGTTGGTGGGGATGCTGCTGGGAATGGCTCAGAAAGCAAT GGTAGGGAGTCGTCATCATACCAGAGGTTTGATATTCAGCAGATTGCGAAGTGGATTGAACAGATTCTGCCTTTTTCGCTCTTGTTATTCGTTGTTTTCA TCCGTCAGCATTTGCAAGGTACAACCACTACTTGTTCCTATTGGTAATATTATGTGCACAATGGCAATTTTGGCTTCAAAGGTTCCTCCTAGGGTACTAA TGAAATCATAGGCATTGTGCATTTCCCTTTGTTTACTTTCTATTTACTTTTAGTACATTAATTGACAAAATATCGGGAGAATTGTTTCTGATGTAAGTAT AGGCTAGACTTTGATGATATGACCATACCAAGCCCATAGCTAATTTGTTTAGGGTGTGCTTTCTTCACCATGTTCTTCATAGTCTTACATTCATATTACT TAGGTCTTAGTTGCCTGTTTTTTTAGAGCCCTGGTTGTTTGTCGTCAAGGAATGTGCTTGTTTGAATAATGGTATGGCGAAGAGTGGATTAATGAAAACT ATGGAATTCAATTTTTTTTTAATTCATTTTGGTGTTGCTACCTTGCTAAGTGTTATCGATTAATACCAAATTACCAACCAAACAATTCTGCCACGGCTGA CAACACTGCATGTTTTCCATGAGGAAAGGCGTAGAAGAAAAGATCATCTCGTAATTTTTTTAGTATCACCAATCATGTGGATTGTGCTCTCTTTTGTTTA CCATTTCTCCATTTGGTAGCATCCCACGTTTGTAAGGAAGTTGCAGCTTTGCTAATTGTAAGTAAGGTAAATACATGGAAGGGTTAACAAAACAATGATC CCTATCTGCCGTGTGAGTTGTGATTGTCTCTTTTATTTTTTGCAACCGCTTCCTCCCTTTTGAGAAGTTGCATGATGAACTGCTTCTCACACATAGTTTC AGTGTCCTCTTAATTTTTGCTTTTGATAATTTCCGTATTAGTTGGTGATATTCATTTCCAAGAGTTTGCAGGTTTCTTTGTCACAATTTGGATATCAGCT GTGATGTTCAAGTCAAATGAAATTGTTAAAAGGCAGACAGCATTGAAGGGAGATAGGAGAGTATCTATCCTTGTTGGCATCTCAATTGCCTTCATGCTTC ATGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCGCTGATCATGATTCCCCCAAAAGCTACACCTTTTTGGCATTCAATATTCAT CATTTTGGTTAATGATACATTGATGCGGCAAGCAGCAATGGCTTTCAAGTGTTTTCTGCTTATATATTACAAAAATGGCAGAGGTCAAAACTTCCGTAGG CAGGCTCAAATGTTGACTCTGGTTGAGTACACACTGCTGTTGTATCGTGCCTTGTTGCCAACTCCAGTTTGGTACCGTTTTTTCCTGAACAAGGATTATG GCAGTCTCTTTTCATCACTGATCACTGGGTTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGGTTAAATGTTTTTTTTCTGCCGTGAAAGCATT ATCAAGAAAGGATGTTAACTATGGGGTTTGTGCCACAATGGAACAGGTTAATGCTGCTGGTGATCTATGTGCTATATGCCAGGAGAAGATGCATGCCCCC ATCTTGTTGCAATGTAAACACATTTTCTGTGAAGAGTGTGTATCAGAATGGTTTGAGAGAGAAAGAACTTGCCCACTTTGTAGAGCATTGGTAAGACCTG CTGATCTGAAAACCTTTGGAGATGGATCTACAAGTCTACTGTTTCAGTTGTTTTAAACTCATATTCTGTATTGATATCACATGTACAAACCCGAGGGGGT CCACTAAGTCACTAACTCATATTTATTCCTAATGTGTTAGGCAAATATGGTGAACACAAATTGTTCATATTATTACATCCTTTTGCTTTTAAGTATATGT AACAGGCTTTATGCTATAATATATGAGCCCTTCTTGAATTTGCTACTTATTATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187120; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295900
| Blastp | - |
|---|---|
| Blastx | RING finger and transmembrane domain-containing protein 2 from Homo with 29.63% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460921.1) |
| Pfam | - |
| Rfam | - |
| GO | - |